RNA–Protein interactions for RNA: YLR007W

NSE1, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE1	YLR007W	HIT1	P46973	164 aa		4.1	□□□□□ -1.75
NSE1	YLR007W	ZPR1	P53303	486 aa	Known RBP	4.1	□□□□□ -1.75
NSE1	YLR007W	TDA7	P53882	636 aa	Predicted RBP	4.1	□□□□□ -1.75
NSE1	YLR007W	SPP2	Q02521	185 aa		4.1	□□□□□ -1.75
NSE1	YLR007W	SHR3	Q02774	210 aa		4.1	□□□□□ -1.75
NSE1	YLR007W	MDM30	Q05930	598 aa		4.1	□□□□□ -1.75
NSE1	YLR007W	SOR2	Q07786	357 aa		4.1	□□□□□ -1.75
NSE1	YLR007W	YOL075C	Q08234	1294 aa		4.1	□□□□□ -1.75
NSE1	YLR007W	SLF1	Q12034	447 aa	Known RBP	4.1	□□□□□ -1.75
NSE1	YLR007W	TDH2	P00358	332 aa	Known RBP	4.09	□□□□□ -1.75
NSE1	YLR007W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
NSE1	YLR007W	RAD7	P06779	565 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	SLM5	P25345	492 aa	Known RBP	4.09	□□□□□ -1.75
NSE1	YLR007W	YCR022C	P25620	114 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	SNC1	P31109	117 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	ZIP1	P31111	875 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	KDX1	P36005	433 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	YHR122W	P38829	231 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	YHR177W	P38867	453 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	YER079W	P40052	210 aa	Known RBP	4.09	□□□□□ -1.75
NSE1	YLR007W	RFC4	P40339	323 aa	Known RBP	4.09	□□□□□ -1.75
NSE1	YLR007W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
NSE1	YLR007W	STE24	P47154	453 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	LIF1	P53150	421 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	SAM50	P53969	484 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	HXT11	P54862	567 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	MYO5	Q04439	1219 aa	Known RBP	4.09	□□□□□ -1.75
NSE1	YLR007W	THI20	Q08224	551 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	SRL1	Q08673	210 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	DAP1	Q12091	152 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	PRP46	Q12417	451 aa	Predicted RBP	4.09	□□□□□ -1.75
NSE1	YLR007W	ATG31	Q12421	196 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	RRP12	Q12754	1228 aa	Known RBP	4.09	□□□□□ -1.75
NSE1	YLR007W	UBA3	Q99344	299 aa		4.09	□□□□□ -1.75
NSE1	YLR007W	GDH1	P07262	454 aa	Known RBP	4.08	□□□□□ -1.76
NSE1	YLR007W	DST1	P07273	309 aa		4.08	□□□□□ -1.76
NSE1	YLR007W	RPS16A	P0CX51	143 aa	Known RBP	4.08	□□□□□ -1.76
NSE1	YLR007W	RPS16B	P0CX52	143 aa	Known RBP	4.08	□□□□□ -1.76
NSE1	YLR007W	MRS3	P10566	314 aa		4.08	□□□□□ -1.76
NSE1	YLR007W	POL30	P15873	258 aa	Known RBP	4.08	□□□□□ -1.76
NSE1	YLR007W	RPL24B	P24000	155 aa	Known RBP	4.08	□□□□□ -1.76
NSE1	YLR007W	AIM29	P36154	155 aa		4.08	□□□□□ -1.76
NSE1	YLR007W	PHO86	P46956	311 aa		4.08	□□□□□ -1.76
NSE1	YLR007W	YJR011C	P47086	261 aa	Predicted RBP	4.08	□□□□□ -1.76
NSE1	YLR007W	YJR154W	P47181	346 aa		4.08	□□□□□ -1.76
NSE1	YLR007W	HSH155	P49955	971 aa	Known RBP	4.08	□□□□□ -1.76
NSE1	YLR007W	KAP114	P53067	1004 aa		4.08	□□□□□ -1.76
NSE1	YLR007W	YGR168C	P53293	376 aa		4.08	□□□□□ -1.76
NSE1	YLR007W	SLD5	Q03406	294 aa		4.08	□□□□□ -1.76
NSE1	YLR007W	YDR415C	Q04033	374 aa	Predicted RBP	4.08	□□□□□ -1.76
NSE1	YLR007W	HSP31	Q04432	237 aa		4.08	□□□□□ -1.76
NSE1	YLR007W	YMR226C	Q05016	267 aa	Known RBP	4.08	□□□□□ -1.76
NSE1	YLR007W	YLR283W	Q05867	314 aa		4.08	□□□□□ -1.76
NSE1	YLR007W	PAM18	Q07914	168 aa		4.08	□□□□□ -1.76
NSE1	YLR007W	LOT6	Q07923	191 aa		4.08	□□□□□ -1.76
NSE1	YLR007W	YOR029W	Q12243	111 aa		4.08	□□□□□ -1.76
NSE1	YLR007W	FSH3	Q99369	266 aa		4.08	□□□□□ -1.76
NSE1	YLR007W	CHS1	P08004	1131 aa		4.07	□□□□□ -1.76
NSE1	YLR007W	TYR1	P20049	452 aa		4.07	□□□□□ -1.76
NSE1	YLR007W	VPS1	P21576	704 aa	Known RBP	4.07	□□□□□ -1.76
NSE1	YLR007W	DBR1	P24309	405 aa	Known RBP	4.07	□□□□□ -1.76
NSE1	YLR007W	RAD57	P25301	460 aa		4.07	□□□□□ -1.76
NSE1	YLR007W	PBN1	P25580	416 aa		4.07	□□□□□ -1.76
NSE1	YLR007W	PRP21	P32524	280 aa	Predicted RBP	4.07	□□□□□ -1.76
NSE1	YLR007W	ECM15	P35195	104 aa		4.07	□□□□□ -1.76
NSE1	YLR007W	RTT107	P38850	1070 aa		4.07	□□□□□ -1.76
NSE1	YLR007W	DSE1	P40077	573 aa		4.07	□□□□□ -1.76
NSE1	YLR007W	SYG1	P40528	902 aa		4.07	□□□□□ -1.76
NSE1	YLR007W	FMP33	P46998	180 aa		4.07	□□□□□ -1.76
NSE1	YLR007W	HAM1	P47119	197 aa	Known RBP	4.07	□□□□□ -1.76
NSE1	YLR007W	RMR1	P53060	241 aa		4.07	□□□□□ -1.76
NSE1	YLR007W	YIF1	P53845	314 aa	Known RBP	4.07	□□□□□ -1.76
NSE1	YLR007W	ENT5	Q03769	411 aa	Known RBP	4.07	□□□□□ -1.76
NSE1	YLR007W	RRP17	Q04031	235 aa	Predicted RBP	4.07	□□□□□ -1.76
NSE1	YLR007W	AIM33	Q04516	312 aa		4.07	□□□□□ -1.76
NSE1	YLR007W	FMP42	Q04991	504 aa		4.07	□□□□□ -1.76
NSE1	YLR007W	GMC2	Q06201	188 aa		4.07	□□□□□ -1.76
NSE1	YLR007W	RAX1	Q08760	435 aa		4.07	□□□□□ -1.76
NSE1	YLR007W	SAM4	Q08985	325 aa	Known RBP	4.07	□□□□□ -1.76
NSE1	YLR007W	PKH2	Q12236	1081 aa	Known RBP	4.07	□□□□□ -1.76
NSE1	YLR007W	SEY1	Q99287	776 aa		4.07	□□□□□ -1.76
NSE1	YLR007W	MATALPHA1	P0CY06	175 aa		4.06	□□□□□ -1.76
NSE1	YLR007W	HMLALPHA1	P0CY07	175 aa		4.06	□□□□□ -1.76
NSE1	YLR007W	MRP1	P10662	321 aa	Known RBP	4.06	□□□□□ -1.76
NSE1	YLR007W	CLN3	P13365	580 aa		4.06	□□□□□ -1.76
NSE1	YLR007W	AMD1	P15274	810 aa	Known RBP	4.06	□□□□□ -1.76
NSE1	YLR007W	ZRC1	P20107	442 aa		4.06	□□□□□ -1.76
NSE1	YLR007W	RAD24	P32641	659 aa		4.06	□□□□□ -1.76
NSE1	YLR007W	OSH3	P38713	996 aa	Known RBP	4.06	□□□□□ -1.76
NSE1	YLR007W	PRM9	P39551	298 aa		4.06	□□□□□ -1.76
NSE1	YLR007W	SAS2	P40963	338 aa		4.06	□□□□□ -1.76
NSE1	YLR007W	YDL186W	P48568	277 aa		4.06	□□□□□ -1.76
NSE1	YLR007W	GIP3	Q03016	1276 aa		4.06	□□□□□ -1.76
NSE1	YLR007W	YRA1	Q12159	226 aa	Known RBP	4.06	□□□□□ -1.76
NSE1	YLR007W	YBL111C	Q3E7Y5	667 aa		4.06	□□□□□ -1.76
NSE1	YLR007W	LAG2	Q92325	660 aa		4.06	□□□□□ -1.76
NSE1	YLR007W	RAD9	P14737	1309 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	OPI3	P05375	206 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	RPL27A	P0C2H6	136 aa	Known RBP	4.05	□□□□□ -1.76
NSE1	YLR007W	RPL27B	P0C2H7	136 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms