RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR1	YKR101W	EGD1	Q02642	157 aa	Known RBP	4.2	□□□□□ -1.74
SIR1	YKR101W	SSC1	P0CS90	654 aa	Known RBP	4.19	□□□□□ -1.74
SIR1	YKR101W	SLY1	P22213	666 aa		4.19	□□□□□ -1.74
SIR1	YKR101W	YCR043C	P25361	127 aa		4.19	□□□□□ -1.74
SIR1	YKR101W	SEC1	P30619	724 aa	Known RBP	4.19	□□□□□ -1.74
SIR1	YKR101W	TRS65	P32893	560 aa		4.19	□□□□□ -1.74
SIR1	YKR101W	ASK1	P35734	292 aa		4.19	□□□□□ -1.74
SIR1	YKR101W	DOA1	P36037	715 aa		4.19	□□□□□ -1.74
SIR1	YKR101W	YHR131C	P38835	850 aa		4.19	□□□□□ -1.74
SIR1	YKR101W	YHC3	P47040	408 aa		4.19	□□□□□ -1.74
SIR1	YKR101W	YDL186W	P48568	277 aa		4.19	□□□□□ -1.74
SIR1	YKR101W	YGL185C	P53100	379 aa		4.19	□□□□□ -1.74
SIR1	YKR101W	SMP3	Q04174	516 aa		4.19	□□□□□ -1.74
SIR1	YKR101W	VAC14	Q06708	880 aa		4.19	□□□□□ -1.74
SIR1	YKR101W	AFT2	Q08957	416 aa		4.19	□□□□□ -1.74
SIR1	YKR101W	AYT1	Q12226	474 aa		4.19	□□□□□ -1.74
SIR1	YKR101W	YDR262W	Q12331	272 aa		4.19	□□□□□ -1.74
SIR1	YKR101W	YOR338W	Q99326	363 aa		4.19	□□□□□ -1.74
SIR1	YKR101W	CHC1	P22137	1653 aa	Known RBP	4.19	□□□□□ -1.74
SIR1	YKR101W	YPS1	P32329	569 aa		4.18	□□□□□ -1.74
SIR1	YKR101W	COX13	P32799	129 aa		4.18	□□□□□ -1.74
SIR1	YKR101W	BUD2	P33314	1104 aa		4.18	□□□□□ -1.74
SIR1	YKR101W	VPS45	P38932	577 aa		4.18	□□□□□ -1.74
SIR1	YKR101W	RPR2	P40571	144 aa		4.18	□□□□□ -1.74
SIR1	YKR101W	RTT101	P47050	842 aa		4.18	□□□□□ -1.74
SIR1	YKR101W	TPT1	Q12272	230 aa	Known RBP	4.18	□□□□□ -1.74
SIR1	YKR101W	GLE1	Q12315	538 aa		4.18	□□□□□ -1.74
SIR1	YKR101W	PAA1	Q12447	191 aa	Known RBP	4.18	□□□□□ -1.74
SIR1	YKR101W	ATO2	P32907	282 aa		4.18	□□□□□ -1.74
SIR1	YKR101W	SKT5	P34226	696 aa		4.18	□□□□□ -1.74
SIR1	YKR101W	GPX2	P38143	162 aa		4.18	□□□□□ -1.74
SIR1	YKR101W	FAA2	P39518	744 aa		4.18	□□□□□ -1.74
SIR1	YKR101W	YGR117C	P53270	476 aa		4.18	□□□□□ -1.74
SIR1	YKR101W	SCW4	P53334	386 aa	Known RBP	4.18	□□□□□ -1.74
SIR1	YKR101W	HXT11	P54862	567 aa		4.18	□□□□□ -1.74
SIR1	YKR101W	YOP1	Q12402	180 aa		4.18	□□□□□ -1.74
SIR1	YKR101W	YOR093C	Q12275	1648 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	HAP1	P0CE41	1502 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	MAS2	P11914	482 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	CLN3	P13365	580 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	CAP2	P13517	287 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	EXG1	P23776	448 aa	Known RBP	4.17	□□□□□ -1.74
SIR1	YKR101W	MXR2	P25566	168 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	KKQ8	P36004	724 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	EBP2	P36049	427 aa	Known RBP	4.17	□□□□□ -1.74
SIR1	YKR101W	MET30	P39014	640 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	ALG8	P40351	577 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	YIL169C	P40442	995 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	TES1	P41903	349 aa	Known RBP	4.17	□□□□□ -1.74
SIR1	YKR101W	SPR6	Q01684	191 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	SPO19	Q03029	223 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	CCE1	Q03702	353 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	GRX3	Q03835	250 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	FMP42	Q04991	504 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	YPL199C	Q08954	240 aa		4.17	□□□□□ -1.74
SIR1	YKR101W	RPL15A	P05748	204 aa	Known RBP	4.16	□□□□□ -1.74
SIR1	YKR101W	YLL053C	P0CD98	152 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	CDC23	P16522	626 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	VAM7	P32912	316 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	PMU1	P36069	295 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	OST1	P41543	476 aa	Known RBP	4.16	□□□□□ -1.74
SIR1	YKR101W	YFR016C	P43597	1233 aa	Known RBP	4.16	□□□□□ -1.74
SIR1	YKR101W	BCH1	Q05029	724 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	KAP95	Q06142	861 aa	Known RBP	4.16	□□□□□ -1.74
SIR1	YKR101W	MRPL35	Q06678	367 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	SNA4	Q07549	140 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	MUM3	Q08750	479 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	RPL18A	P0CX49	186 aa	Known RBP	4.16	□□□□□ -1.74
SIR1	YKR101W	RPL18B	P0CX50	186 aa	Known RBP	4.16	□□□□□ -1.74
SIR1	YKR101W	UGA1	P17649	471 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	YCL068C	P25593	260 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	YEF1	P32622	495 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	YKL070W	P36087	169 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	RTC2	P38279	296 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	TIF5	P38431	405 aa	Known RBP	4.16	□□□□□ -1.74
SIR1	YKR101W	SFH5	P47008	294 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	SSN8	P47821	323 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	TIM11	P81449	96 aa	Predicted RBP	4.16	□□□□□ -1.74
SIR1	YKR101W	YMR111C	Q04461	462 aa	Predicted RBP	4.16	□□□□□ -1.74
SIR1	YKR101W	RRG8	Q06109	277 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	RAX1	Q08760	435 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	YIL002W-A	Q3E7Z5	69 aa		4.16	□□□□□ -1.74
SIR1	YKR101W	MTF1	P14908	341 aa	Known RBP	4.15	□□□□□ -1.74
SIR1	YKR101W	FAR1	P21268	830 aa		4.15	□□□□□ -1.74
SIR1	YKR101W	UTR1	P21373	530 aa		4.15	□□□□□ -1.74
SIR1	YKR101W	PTP1	P25044	335 aa		4.15	□□□□□ -1.74
SIR1	YKR101W	CIN8	P27895	1000 aa		4.15	□□□□□ -1.74
SIR1	YKR101W	RPT5	P33297	434 aa	Known RBP	4.15	□□□□□ -1.74
SIR1	YKR101W	MRPS5	P33759	307 aa		4.15	□□□□□ -1.74
SIR1	YKR101W	MCR1	P36060	302 aa	Known RBP	4.15	□□□□□ -1.74
SIR1	YKR101W	ATG7	P38862	630 aa		4.15	□□□□□ -1.74
SIR1	YKR101W	YMR181C	Q03231	154 aa		4.15	□□□□□ -1.74
SIR1	YKR101W	NAT4	Q04751	285 aa		4.15	□□□□□ -1.74
SIR1	YKR101W	RLP24	Q07915	199 aa	Known RBP	4.15	□□□□□ -1.74
SIR1	YKR101W	GAT3	Q07928	141 aa		4.15	□□□□□ -1.74
SIR1	YKR101W	RRT8	Q08219	342 aa		4.15	□□□□□ -1.74
SIR1	YKR101W	SNX3	Q08826	162 aa	Known RBP	4.15	□□□□□ -1.74
SIR1	YKR101W	RRP12	Q12754	1228 aa	Known RBP	4.15	□□□□□ -1.74
SIR1	YKR101W	POM152	P39685	1337 aa		4.15	□□□□□ -1.75
SIR1	YKR101W	SUP35	P05453	685 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms