RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W YLR345WQ06137 509 aa3.68□□□□□ -1.82
PTM1YKL039W IMA2Q08295 589 aa3.68□□□□□ -1.82
PTM1YKL039W PHO88P38264 188 aaPredicted RBP3.68□□□□□ -1.82
PTM1YKL039W URH1Q04179 340 aa3.68□□□□□ -1.82
PTM1YKL039W ATG34Q12292 412 aa3.68□□□□□ -1.82
PTM1YKL039W HXT1P32465 570 aa3.67□□□□□ -1.82
PTM1YKL039W YGL039WP53183 348 aaKnown RBP3.67□□□□□ -1.82
PTM1YKL039W CWC22P53333 577 aaKnown RBP3.67□□□□□ -1.82
PTM1YKL039W MRS2Q01926 470 aa3.67□□□□□ -1.82
PTM1YKL039W YRM1Q12340 786 aa3.67□□□□□ -1.82
PTM1YKL039W MOT1P32333 1867 aa3.66□□□□□ -1.82
PTM1YKL039W DBP7P36120 742 aaKnown RBP3.66□□□□□ -1.82
PTM1YKL039W HOT1Q03213 719 aa3.66□□□□□ -1.82
PTM1YKL039W SPH1Q06160 661 aa3.66□□□□□ -1.82
PTM1YKL039W MED2Q12124 431 aa3.66□□□□□ -1.82
PTM1YKL039W WTM1Q12363 437 aaKnown RBP3.66□□□□□ -1.82
PTM1YKL039W ERP3Q12403 225 aa3.66□□□□□ -1.82
PTM1YKL039W PRX1P34227 261 aaKnown RBP3.65□□□□□ -1.82
PTM1YKL039W MCR1P36060 302 aaKnown RBP3.65□□□□□ -1.82
PTM1YKL039W ALD5P40047 520 aaKnown RBP3.65□□□□□ -1.82
PTM1YKL039W SER3P40054 469 aa3.65□□□□□ -1.82
PTM1YKL039W PEX25Q02969 394 aa3.65□□□□□ -1.82
PTM1YKL039W PRP3Q03338 469 aaPredicted RBP3.65□□□□□ -1.82
PTM1YKL039W NCB2Q92317 146 aa3.65□□□□□ -1.82
PTM1YKL039W MTR10Q99189 972 aa3.65□□□□□ -1.82
PTM1YKL039W FAB1P34756 2278 aa3.64□□□□□ -1.83
PTM1YKL039W RRP1P35178 278 aaPredicted RBP3.64□□□□□ -1.83
PTM1YKL039W SIM1P40472 476 aa3.64□□□□□ -1.83
PTM1YKL039W YPS6P40583 537 aa3.64□□□□□ -1.83
PTM1YKL039W BRO1P48582 844 aa3.64□□□□□ -1.83
PTM1YKL039W SHY1P53266 389 aa3.64□□□□□ -1.83
PTM1YKL039W YMR027WQ04371 470 aa3.64□□□□□ -1.83
PTM1YKL039W YMR321CQ04898 105 aa3.64□□□□□ -1.83
PTM1YKL039W IRC25Q07951 179 aa3.64□□□□□ -1.83
PTM1YKL039W TPT1Q12272 230 aaKnown RBP3.64□□□□□ -1.83
PTM1YKL039W DDP1Q99321 188 aaKnown RBP3.64□□□□□ -1.83
PTM1YKL039W CPR2P23285 205 aa3.63□□□□□ -1.83
PTM1YKL039W CBF5P33322 483 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
PTM1YKL039W HEL1P36113 551 aa3.63□□□□□ -1.83
PTM1YKL039W CHK1P38147 527 aa3.63□□□□□ -1.83
PTM1YKL039W GDT1P38301 280 aaPredicted RBP3.63□□□□□ -1.83
PTM1YKL039W MED8P38304 223 aa3.63□□□□□ -1.83
PTM1YKL039W VHS2P40463 436 aa3.63□□□□□ -1.83
PTM1YKL039W YJR085CP47131 105 aaKnown RBP3.63□□□□□ -1.83
PTM1YKL039W AIM32Q04689 311 aa3.63□□□□□ -1.83
PTM1YKL039W SML1Q04964 104 aa3.63□□□□□ -1.83
PTM1YKL039W RRP9Q06506 573 aaKnown RBP3.63□□□□□ -1.83
PTM1YKL039W RAX1Q08760 435 aa3.63□□□□□ -1.83
PTM1YKL039W SOD1P00445 154 aaKnown RBP3.63□□□□□ -1.83
PTM1YKL039W HOM3P10869 527 aa3.63□□□□□ -1.83
PTM1YKL039W ARO3P14843 370 aaKnown RBP3.63□□□□□ -1.83
PTM1YKL039W FRS2P15625 503 aaKnown RBP3.63□□□□□ -1.83
PTM1YKL039W SWI3P32591 825 aa3.63□□□□□ -1.83
PTM1YKL039W CSE2P33308 149 aa3.63□□□□□ -1.83
PTM1YKL039W YBR056WP38081 501 aa3.63□□□□□ -1.83
PTM1YKL039W SBE22P38814 852 aa3.63□□□□□ -1.83
PTM1YKL039W ZIM17P42844 174 aa3.63□□□□□ -1.83
PTM1YKL039W MDE1P47095 244 aa3.63□□□□□ -1.83
PTM1YKL039W ARP5P53946 755 aa3.63□□□□□ -1.83
PTM1YKL039W RPN9Q04062 393 aaKnown RBP3.63□□□□□ -1.83
PTM1YKL039W BSC6Q08280 497 aa3.63□□□□□ -1.83
PTM1YKL039W VPS54Q12071 889 aa3.63□□□□□ -1.83
PTM1YKL039W YKL068W-AQ3E826 78 aa3.63□□□□□ -1.83
PTM1YKL039W MYO1P08964 1928 aa3.62□□□□□ -1.83
PTM1YKL039W CUP1-1P0CX80 61 aa3.62□□□□□ -1.83
PTM1YKL039W CUP1-2P0CX81 61 aa3.62□□□□□ -1.83
PTM1YKL039W MAS2P11914 482 aa3.62□□□□□ -1.83
PTM1YKL039W YCL068CP25593 260 aa3.62□□□□□ -1.83
PTM1YKL039W ASC1P38011 319 aaKnown RBP3.62□□□□□ -1.83
PTM1YKL039W DED81P38707 554 aaKnown RBP3.62□□□□□ -1.83
PTM1YKL039W TVP23P38962 199 aa3.62□□□□□ -1.83
PTM1YKL039W CAJ1P39101 391 aa3.62□□□□□ -1.83
PTM1YKL039W RIO2P40160 425 aaKnown RBP3.62□□□□□ -1.83
PTM1YKL039W GAT2P40209 560 aa3.62□□□□□ -1.83
PTM1YKL039W CHS6P40955 746 aa3.62□□□□□ -1.83
PTM1YKL039W NUP116Q02630 1113 aa3.62□□□□□ -1.83
PTM1YKL039W YMR102CQ03177 834 aa3.62□□□□□ -1.83
PTM1YKL039W FKS1P38631 1876 aaKnown RBP3.62□□□□□ -1.83
PTM1YKL039W DBF4P32325 704 aa3.61□□□□□ -1.83
PTM1YKL039W PHA2P32452 334 aa3.61□□□□□ -1.83
PTM1YKL039W YEL043WP32618 956 aa3.61□□□□□ -1.83
PTM1YKL039W STD1Q02794 444 aa3.61□□□□□ -1.83
PTM1YKL039W RUD3Q12234 484 aaKnown RBP3.61□□□□□ -1.83
PTM1YKL039W PDR18P53756 1333 aa3.61□□□□□ -1.83
PTM1YKL039W RIF1P29539 1916 aa3.6□□□□□ -1.83
PTM1YKL039W RDS1P25611 832 aa3.6□□□□□ -1.83
PTM1YKL039W YKT6P36015 200 aaKnown RBP3.6□□□□□ -1.83
PTM1YKL039W AIM10P39965 576 aaKnown RBP3.6□□□□□ -1.83
PTM1YKL039W MLC1P53141 149 aa3.6□□□□□ -1.83
PTM1YKL039W MAL13P53338 473 aa3.6□□□□□ -1.83
PTM1YKL039W CCE1Q03702 353 aa3.6□□□□□ -1.83
PTM1YKL039W TSA2Q04120 196 aa3.6□□□□□ -1.83
PTM1YKL039W ISA2Q12425 185 aa3.6□□□□□ -1.83
PTM1YKL039W HSP82P02829 709 aaKnown RBP3.59□□□□□ -1.83
PTM1YKL039W RPL40AP0CH08 128 aaKnown RBP3.59□□□□□ -1.83
PTM1YKL039W RPL40BP0CH09 128 aaKnown RBP3.59□□□□□ -1.83
PTM1YKL039W NAM2P11325 894 aa3.59□□□□□ -1.83
PTM1YKL039W MDH1P17505 334 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
PTM1YKL039W ZUO1P32527 433 aaKnown RBP3.59□□□□□ -1.83
PTM1YKL039W BUD2P33314 1104 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms