RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC6	YJL194W	HPR1	P17629	752 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	RAD57	P25301	460 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	PEX3	P28795	441 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
CDC6	YJL194W	BMH1	P29311	267 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	SPS19	P32573	292 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	SKT5	P34226	696 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	ANS1	P38832	159 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	TDA11	P38854	504 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	FHL1	P39521	936 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	YMR134W	P40207	237 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	BAP3	P41815	604 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	TFG2	P41896	400 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	PHO86	P46956	311 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	YIP4	P53093	235 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	YGL082W	P53155	381 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	SLI1	P53304	468 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	DUG3	P53871	357 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	ALG11	P53954	548 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	NUP116	Q02630	1113 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	MSC1	Q03104	513 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	YMR178W	Q03219	274 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	EBS1	Q03466	884 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	RVB1	Q03940	463 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	SMP3	Q04174	516 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	YMR087W	Q04299	284 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	AIM33	Q04516	312 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	GFD1	Q04839	188 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	RGC1	Q06108	1083 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	SPO77	Q06134	477 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	TMA10	Q06177	86 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	BER1	Q06688	274 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	MSH5	Q12175	901 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	PKH2	Q12236	1081 aa	Known RBP	4.05	□□□□□ -1.76
CDC6	YJL194W	ERP3	Q12403	225 aa		4.05	□□□□□ -1.76
CDC6	YJL194W	TUS1	Q06412	1307 aa		4.04	□□□□□ -1.76
CDC6	YJL194W	CHO2	P05374	869 aa	Known RBP	4.04	□□□□□ -1.76
CDC6	YJL194W	CHS1	P08004	1131 aa		4.04	□□□□□ -1.76
CDC6	YJL194W	RPL35A	P0CX84	120 aa	Known RBP	4.04	□□□□□ -1.76
CDC6	YJL194W	RPL35B	P0CX85	120 aa	Known RBP	4.04	□□□□□ -1.76
CDC6	YJL194W	REV1	P12689	985 aa		4.04	□□□□□ -1.76
CDC6	YJL194W	FRS2	P15625	503 aa	Known RBP	4.04	□□□□□ -1.76
CDC6	YJL194W	RPS5	P26783	225 aa	Known RBP	4.04	□□□□□ -1.76
CDC6	YJL194W	ADE1	P27616	306 aa		4.04	□□□□□ -1.76
CDC6	YJL194W	PRP21	P32524	280 aa	Predicted RBP	4.04	□□□□□ -1.76
CDC6	YJL194W	MNS1	P32906	549 aa		4.04	□□□□□ -1.76
CDC6	YJL194W	APL3	P38065	1025 aa		4.04	□□□□□ -1.76
CDC6	YJL194W	BNA4	P38169	460 aa		4.04	□□□□□ -1.76
CDC6	YJL194W	VBA2	P38358	474 aa	Known RBP	4.04	□□□□□ -1.76
CDC6	YJL194W	SBE22	P38814	852 aa		4.04	□□□□□ -1.76
CDC6	YJL194W	THO1	P40040	218 aa	Known RBP	4.04	□□□□□ -1.76
CDC6	YJL194W	BTT1	P40314	149 aa	Predicted RBP	4.04	□□□□□ -1.76
CDC6	YJL194W	YJR011C	P47086	261 aa	Predicted RBP	4.04	□□□□□ -1.76
CDC6	YJL194W	GET1	P53192	235 aa		4.04	□□□□□ -1.76
CDC6	YJL194W	UBX2	Q04228	584 aa		4.04	□□□□□ -1.76
CDC6	YJL194W	DCR2	Q05924	578 aa		4.04	□□□□□ -1.76
CDC6	YJL194W	YDL086W	Q07505	273 aa		4.04	□□□□□ -1.76
CDC6	YJL194W	YOL159C	Q08300	171 aa		4.04	□□□□□ -1.76
CDC6	YJL194W	PER33	Q12144	273 aa		4.04	□□□□□ -1.76
CDC6	YJL194W	TRM13	Q12383	476 aa		4.04	□□□□□ -1.76
CDC6	YJL194W	AIM45	Q12480	344 aa	Known RBP	4.04	□□□□□ -1.76
CDC6	YJL194W	MDS3	P53094	1487 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	ROM2	P51862	1356 aa	Known RBP	4.03	□□□□□ -1.76
CDC6	YJL194W	HTB1	P02293	131 aa	Known RBP	4.03	□□□□□ -1.76
CDC6	YJL194W	HTB2	P02294	131 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	PET494	P07390	489 aa	Predicted RBP	4.03	□□□□□ -1.76
CDC6	YJL194W	HEM1	P09950	548 aa	Predicted RBP	4.03	□□□□□ -1.76
CDC6	YJL194W	YBR121C-A	P0C5L4	52 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	SEN2	P16658	377 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	KAR4	P25583	335 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	CTS1	P29029	562 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	TMT1	P32643	299 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	MYO3	P36006	1272 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	YPK3	P38070	525 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	ERG28	P40030	148 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	LYS12	P40495	371 aa	Known RBP	4.03	□□□□□ -1.76
CDC6	YJL194W	ERG10	P41338	398 aa	Known RBP	4.03	□□□□□ -1.76
CDC6	YJL194W	RPS15	Q01855	142 aa	Known RBP	4.03	□□□□□ -1.76
CDC6	YJL194W	MRS2	Q01926	470 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	PEX12	Q04370	399 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	PLM2	Q04383	521 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	HSP31	Q04432	237 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	FAR8	Q05040	523 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	SEC10	Q06245	871 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	REX4	Q08237	289 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	AFT2	Q08957	416 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	YPQ1	Q12010	308 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	LCB4	Q12246	624 aa		4.03	□□□□□ -1.76
CDC6	YJL194W	MLP1	Q02455	1875 aa	Known RBP	4.03	□□□□□ -1.77
CDC6	YJL194W	PSK1	P31374	1356 aa		4.02	□□□□□ -1.77
CDC6	YJL194W	HIS4	P00815	799 aa	Known RBP	4.02	□□□□□ -1.77
CDC6	YJL194W	OPI3	P05375	206 aa		4.02	□□□□□ -1.77
CDC6	YJL194W	ATP1	P07251	545 aa	Known RBP	4.02	□□□□□ -1.77
CDC6	YJL194W	QCR2	P07257	368 aa		4.02	□□□□□ -1.77
CDC6	YJL194W	PEP4	P07267	405 aa	Known RBP	4.02	□□□□□ -1.77
CDC6	YJL194W	PPR1	P07272	904 aa	Predicted RBP	4.02	□□□□□ -1.77
CDC6	YJL194W	CKI1	P20485	582 aa		4.02	□□□□□ -1.77
CDC6	YJL194W	MRPL8	P22353	238 aa		4.02	□□□□□ -1.77
CDC6	YJL194W	POP5	P28005	173 aa		4.02	□□□□□ -1.77
CDC6	YJL194W	GDA1	P32621	518 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms