RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C RRN9P53437 365 aa5.41□□□□□ -1.54
SFB3YHR098C IDP3P53982 420 aaKnown RBP5.41□□□□□ -1.54
SFB3YHR098C YOL131WQ08270 108 aa5.41□□□□□ -1.54
SFB3YHR098C SET6Q12529 373 aa5.41□□□□□ -1.54
SFB3YHR098C VMA16P23968 213 aa5.41□□□□□ -1.54
SFB3YHR098C IFM1P25038 676 aa5.41□□□□□ -1.54
SFB3YHR098C MGR1P25573 417 aa5.41□□□□□ -1.54
SFB3YHR098C TUL1P36096 758 aa5.41□□□□□ -1.54
SFB3YHR098C APL3P38065 1025 aa5.41□□□□□ -1.54
SFB3YHR098C FAT1P38225 669 aa5.41□□□□□ -1.54
SFB3YHR098C SRP68P38687 599 aaKnown RBP5.41□□□□□ -1.54
SFB3YHR098C SPO73P40031 143 aa5.41□□□□□ -1.54
SFB3YHR098C PRE6P40303 254 aaKnown RBP5.41□□□□□ -1.54
SFB3YHR098C SLM1P40485 686 aa5.41□□□□□ -1.54
SFB3YHR098C SEC28P40509 296 aaKnown RBP5.41□□□□□ -1.54
SFB3YHR098C MOG1P47123 218 aa5.41□□□□□ -1.54
SFB3YHR098C JHD2P47156 728 aaPredicted RBP5.41□□□□□ -1.54
SFB3YHR098C ARH1P48360 493 aa5.41□□□□□ -1.54
SFB3YHR098C ALT2P52892 507 aa5.41□□□□□ -1.54
SFB3YHR098C TIM13P53299 105 aa5.41□□□□□ -1.54
SFB3YHR098C YCL001W-AP87012 153 aa5.41□□□□□ -1.54
SFB3YHR098C EMI1Q04406 187 aa5.41□□□□□ -1.54
SFB3YHR098C ATG33Q06485 197 aa5.41□□□□□ -1.54
SFB3YHR098C YTM1Q12024 460 aaPredicted RBP5.41□□□□□ -1.54
SFB3YHR098C YPR015CQ12531 247 aa5.41□□□□□ -1.54
SFB3YHR098C YLR422WQ06409 1932 aa5.41□□□□□ -1.54
SFB3YHR098C RPS9AO13516 197 aaKnown RBP5.4□□□□□ -1.54
SFB3YHR098C CDC4P07834 779 aa5.4□□□□□ -1.54
SFB3YHR098C HVG1P0CE11 249 aa5.4□□□□□ -1.54
SFB3YHR098C PTP1P25044 335 aa5.4□□□□□ -1.54
SFB3YHR098C ECM25P32525 599 aa5.4□□□□□ -1.54
SFB3YHR098C LHP1P33399 275 aaKnown RBP5.4□□□□□ -1.54
SFB3YHR098C IKI1P38874 309 aa5.4□□□□□ -1.54
SFB3YHR098C AIM18P38884 321 aa5.4□□□□□ -1.54
SFB3YHR098C MPM1P40364 252 aa5.4□□□□□ -1.54
SFB3YHR098C YFL052WP43551 465 aa5.4□□□□□ -1.54
SFB3YHR098C MNN10P50108 393 aaKnown RBP5.4□□□□□ -1.54
SFB3YHR098C YGR283CP53336 341 aaPredicted RBP5.4□□□□□ -1.54
SFB3YHR098C GAD1Q04792 585 aa5.4□□□□□ -1.54
SFB3YHR098C YPD1Q07688 167 aa5.4□□□□□ -1.54
SFB3YHR098C THP1Q08231 455 aa5.4□□□□□ -1.54
SFB3YHR098C MCA1Q08601 432 aa5.4□□□□□ -1.54
SFB3YHR098C GUP2Q08929 609 aa5.4□□□□□ -1.54
SFB3YHR098C HOS1Q12214 470 aa5.4□□□□□ -1.54
SFB3YHR098C SIR1P21691 654 aa5.4□□□□□ -1.55
SFB3YHR098C MAG1P22134 296 aaKnown RBP5.4□□□□□ -1.55
SFB3YHR098C YCR101CP25607 182 aa5.4□□□□□ -1.55
SFB3YHR098C RPS7AP26786 190 aaKnown RBP5.4□□□□□ -1.55
SFB3YHR098C CAF4P36130 643 aa5.4□□□□□ -1.55
SFB3YHR098C RTT102P53330 157 aa5.4□□□□□ -1.55
SFB3YHR098C TDA1Q03533 586 aa5.4□□□□□ -1.55
SFB3YHR098C TPP1Q03796 238 aa5.4□□□□□ -1.55
SFB3YHR098C PAL1Q05518 499 aaKnown RBP5.4□□□□□ -1.55
SFB3YHR098C MDM30Q05930 598 aa5.4□□□□□ -1.55
SFB3YHR098C DIB1Q06819 143 aaPredicted RBP5.4□□□□□ -1.55
SFB3YHR098C ISU2Q12056 156 aa5.4□□□□□ -1.55
SFB3YHR098C DIN7Q12086 430 aa5.4□□□□□ -1.55
SFB3YHR098C SIA1Q12212 622 aa5.4□□□□□ -1.55
SFB3YHR098C PKH2Q12236 1081 aaKnown RBP5.4□□□□□ -1.55
SFB3YHR098C ARP7Q12406 477 aa5.4□□□□□ -1.55
SFB3YHR098C PCD1Q12524 340 aa5.4□□□□□ -1.55
SFB3YHR098C ADE4P04046 510 aaKnown RBP5.39□□□□□ -1.55
SFB3YHR098C RPS4AP0CX35 261 aaKnown RBP5.39□□□□□ -1.55
SFB3YHR098C RPS4BP0CX36 261 aaKnown RBP5.39□□□□□ -1.55
SFB3YHR098C REV1P12689 985 aa5.39□□□□□ -1.55
SFB3YHR098C HOP1P20050 605 aa5.39□□□□□ -1.55
SFB3YHR098C UTR1P21373 530 aa5.39□□□□□ -1.55
SFB3YHR098C POT1P27796 417 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
SFB3YHR098C NAM9P27929 486 aa5.39□□□□□ -1.55
SFB3YHR098C COT1P32798 439 aa5.39□□□□□ -1.55
SFB3YHR098C LIP5P32875 414 aa5.39□□□□□ -1.55
SFB3YHR098C SRP102P36057 244 aaPredicted RBP5.39□□□□□ -1.55
SFB3YHR098C MRPL7P36519 292 aa5.39□□□□□ -1.55
SFB3YHR098C ERV15P38312 142 aa5.39□□□□□ -1.55
SFB3YHR098C COS8P38723 381 aa5.39□□□□□ -1.55
SFB3YHR098C PEX28P38848 579 aa5.39□□□□□ -1.55
SFB3YHR098C PTC2P39966 464 aaKnown RBP5.39□□□□□ -1.55
SFB3YHR098C RTT105P40063 208 aa5.39□□□□□ -1.55
SFB3YHR098C YIL024CP40543 189 aa5.39□□□□□ -1.55
SFB3YHR098C IDS2P46958 469 aa5.39□□□□□ -1.55
SFB3YHR098C ERV14P53173 138 aa5.39□□□□□ -1.55
SFB3YHR098C MRPL22P53881 309 aa5.39□□□□□ -1.55
SFB3YHR098C ODC1Q03028 310 aa5.39□□□□□ -1.55
SFB3YHR098C ERO1Q03103 563 aa5.39□□□□□ -1.55
SFB3YHR098C TPO3Q06451 622 aa5.39□□□□□ -1.55
SFB3YHR098C UAF30Q08747 228 aa5.39□□□□□ -1.55
SFB3YHR098C GPB1Q08886 897 aa5.39□□□□□ -1.55
SFB3YHR098C RGT2Q12300 763 aa5.39□□□□□ -1.55
SFB3YHR098C VMA9Q3E7B6 73 aa5.39□□□□□ -1.55
SFB3YHR098C LAA1P39526 2014 aa5.39□□□□□ -1.55
SFB3YHR098C RPL25P04456 142 aaKnown RBP5.39□□□□□ -1.55
SFB3YHR098C PEP4P07267 405 aaKnown RBP5.39□□□□□ -1.55
SFB3YHR098C RPC40P07703 335 aaKnown RBP5.39□□□□□ -1.55
SFB3YHR098C COX13P32799 129 aa5.39□□□□□ -1.55
SFB3YHR098C TAT1P38085 619 aa5.39□□□□□ -1.55
SFB3YHR098C FTH1P38310 465 aa5.39□□□□□ -1.55
SFB3YHR098C PRS3P38689 320 aaKnown RBP5.39□□□□□ -1.55
SFB3YHR098C NVJ1P38881 321 aa5.39□□□□□ -1.55
SFB3YHR098C ATM1P40416 690 aa5.39□□□□□ -1.55
SFB3YHR098C DOT5P40553 215 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms