RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	TAF6	P53040	516 aa		4	□□□□□ -1.77
VMA22	YHR060W	MRPL50	P53724	139 aa		4	□□□□□ -1.77
VMA22	YHR060W	SPP2	Q02521	185 aa		4	□□□□□ -1.77
VMA22	YHR060W	NAT4	Q04751	285 aa		4	□□□□□ -1.77
VMA22	YHR060W	GTO3	Q04806	366 aa		4	□□□□□ -1.77
VMA22	YHR060W	GMC2	Q06201	188 aa		4	□□□□□ -1.77
VMA22	YHR060W	YEH2	Q07950	538 aa		4	□□□□□ -1.77
VMA22	YHR060W	GEP3	Q08622	556 aa		4	□□□□□ -1.77
VMA22	YHR060W	TIM18	Q08749	192 aa		4	□□□□□ -1.77
VMA22	YHR060W	AFT2	Q08957	416 aa		4	□□□□□ -1.77
VMA22	YHR060W	YPR022C	Q12139	1133 aa		4	□□□□□ -1.77
VMA22	YHR060W	NCA2	Q12374	616 aa		4	□□□□□ -1.77
VMA22	YHR060W	YOR338W	Q99326	363 aa		4	□□□□□ -1.77
VMA22	YHR060W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	RIP-Chip
VMA22	YHR060W	RPS16A	P0CX51	143 aa	Known RBP	3.99	□□□□□ -1.77
VMA22	YHR060W	RPS16B	P0CX52	143 aa	Known RBP	3.99	□□□□□ -1.77
VMA22	YHR060W	MEI5	P32489	222 aa		3.99	□□□□□ -1.77
VMA22	YHR060W	MRPS5	P33759	307 aa		3.99	□□□□□ -1.77
VMA22	YHR060W	HIS2	P38635	335 aa		3.99	□□□□□ -1.77
VMA22	YHR060W	TDA11	P38854	504 aa		3.99	□□□□□ -1.77
VMA22	YHR060W	MSS2	P40990	351 aa		3.99	□□□□□ -1.77
VMA22	YHR060W	NDE2	Q07500	545 aa		3.99	□□□□□ -1.77
VMA22	YHR060W	BNR1	P40450	1375 aa		3.99	□□□□□ -1.77
VMA22	YHR060W	RAD3	P06839	778 aa		3.98	□□□□□ -1.77
VMA22	YHR060W	MSF1	P08425	469 aa		3.98	□□□□□ -1.77
VMA22	YHR060W	AMD1	P15274	810 aa	Known RBP	3.98	□□□□□ -1.77
VMA22	YHR060W	ITR2	P30606	609 aa		3.98	□□□□□ -1.77
VMA22	YHR060W	ARO4	P32449	370 aa	Known RBP	3.98	□□□□□ -1.77
VMA22	YHR060W	ERG1	P32476	496 aa	Known RBP	3.98	□□□□□ -1.77
VMA22	YHR060W	YPT53	P36019	220 aa		3.98	□□□□□ -1.77
VMA22	YHR060W	MCR1	P36060	302 aa	Known RBP	3.98	□□□□□ -1.77
VMA22	YHR060W	IML3	P38265	245 aa		3.98	□□□□□ -1.77
VMA22	YHR060W	SHQ1	P40486	507 aa	Predicted RBP	3.98	□□□□□ -1.77
VMA22	YHR060W	CFD1	P40558	293 aa		3.98	□□□□□ -1.77
VMA22	YHR060W	TDA7	P53882	636 aa	Predicted RBP	3.98	□□□□□ -1.77
VMA22	YHR060W	RLI1	Q03195	608 aa	Known RBP	3.98	□□□□□ -1.77
VMA22	YHR060W	HER2	Q03557	464 aa		3.98	□□□□□ -1.77
VMA22	YHR060W	RTT103	Q05543	409 aa		3.98	□□□□□ -1.77
VMA22	YHR060W	BER1	Q06688	274 aa	Known RBP	3.98	□□□□□ -1.77
VMA22	YHR060W	YLR112W	Q12130	139 aa		3.98	□□□□□ -1.77
VMA22	YHR060W	PRP46	Q12417	451 aa	Predicted RBP	3.98	□□□□□ -1.77
VMA22	YHR060W	RRP12	Q12754	1228 aa	Known RBP	3.98	□□□□□ -1.77
VMA22	YHR060W	UBA3	Q99344	299 aa		3.98	□□□□□ -1.77
VMA22	YHR060W	POM152	P39685	1337 aa		3.97	□□□□□ -1.77
VMA22	YHR060W	VPS1	P21576	704 aa	Known RBP	3.97	□□□□□ -1.77
VMA22	YHR060W	RVS161	P25343	265 aa	Known RBP	3.97	□□□□□ -1.77
VMA22	YHR060W	TIP1	P27654	210 aa	Predicted RBP	3.97	□□□□□ -1.77
VMA22	YHR060W	ITR1	P30605	584 aa		3.97	□□□□□ -1.77
VMA22	YHR060W	ZIP1	P31111	875 aa		3.97	□□□□□ -1.77
VMA22	YHR060W	YEF1	P32622	495 aa		3.97	□□□□□ -1.77
VMA22	YHR060W	GCG1	P32656	232 aa	Known RBP	3.97	□□□□□ -1.77
VMA22	YHR060W	PRS1	P32895	427 aa	Known RBP	3.97	□□□□□ -1.77
VMA22	YHR060W	SIP3	P38717	1229 aa		3.97	□□□□□ -1.77
VMA22	YHR060W	FAA2	P39518	744 aa		3.97	□□□□□ -1.77
VMA22	YHR060W	DSE1	P40077	573 aa		3.97	□□□□□ -1.77
VMA22	YHR060W	OTU1	P43558	301 aa		3.97	□□□□□ -1.77
VMA22	YHR060W	FMP33	P46998	180 aa		3.97	□□□□□ -1.77
VMA22	YHR060W	SFH5	P47008	294 aa		3.97	□□□□□ -1.77
VMA22	YHR060W	AZR1	P50080	613 aa		3.97	□□□□□ -1.77
VMA22	YHR060W	TRM112	P53738	135 aa	Predicted RBP	3.97	□□□□□ -1.77
VMA22	YHR060W	ERG13	P54839	491 aa	Known RBP	3.97	□□□□□ -1.77
VMA22	YHR060W	BET4	Q00618	327 aa		3.97	□□□□□ -1.77
VMA22	YHR060W	SSQ1	Q05931	657 aa	Predicted RBP	3.97	□□□□□ -1.77
VMA22	YHR060W	CTS2	Q06350	511 aa		3.97	□□□□□ -1.77
VMA22	YHR060W	YNL162W-A	Q3E7A8	72 aa		3.97	□□□□□ -1.77
VMA22	YHR060W	YOS9	Q99220	542 aa		3.97	□□□□□ -1.77
VMA22	YHR060W	YSR3	P23501	404 aa		3.96	□□□□□ -1.78
VMA22	YHR060W	RAD51	P25454	400 aa		3.96	□□□□□ -1.78
VMA22	YHR060W	PUT3	P25502	979 aa	Predicted RBP	3.96	□□□□□ -1.78
VMA22	YHR060W	DCC1	P25559	380 aa		3.96	□□□□□ -1.78
VMA22	YHR060W	KRE6	P32486	720 aa		3.96	□□□□□ -1.78
VMA22	YHR060W	TOA2	P32774	122 aa		3.96	□□□□□ -1.78
VMA22	YHR060W	SWD2	P36104	329 aa	Predicted RBP	3.96	□□□□□ -1.78
VMA22	YHR060W	PCL6	P40038	420 aa		3.96	□□□□□ -1.78
VMA22	YHR060W	YAR1	P46683	200 aa		3.96	□□□□□ -1.78
VMA22	YHR060W	GWT1	P47026	490 aa		3.96	□□□□□ -1.78
VMA22	YHR060W	NAS6	P50086	228 aa		3.96	□□□□□ -1.78
VMA22	YHR060W	LST7	P53237	242 aa		3.96	□□□□□ -1.78
VMA22	YHR060W	IZH1	Q03419	316 aa		3.96	□□□□□ -1.78
VMA22	YHR060W	ADH6	Q04894	360 aa	Known RBP	3.96	□□□□□ -1.78
VMA22	YHR060W	COX20	Q04935	205 aa		3.96	□□□□□ -1.78
VMA22	YHR060W	YLR283W	Q05867	314 aa		3.96	□□□□□ -1.78
VMA22	YHR060W	ERP3	Q12403	225 aa		3.96	□□□□□ -1.78
VMA22	YHR060W	MEX67	Q99257	599 aa	Known RBP	3.96	□□□□□ -1.78
VMA22	YHR060W	MRP1	P10662	321 aa	Known RBP	3.95	□□□□□ -1.78
VMA22	YHR060W	DAL82	P21705	255 aa		3.95	□□□□□ -1.78
VMA22	YHR060W	ERG9	P29704	444 aa		3.95	□□□□□ -1.78
VMA22	YHR060W	ZUO1	P32527	433 aa	Known RBP	3.95	□□□□□ -1.78
VMA22	YHR060W	MUD1	P32605	298 aa	Known RBP	3.95	□□□□□ -1.78
VMA22	YHR060W	TMT1	P32643	299 aa		3.95	□□□□□ -1.78
VMA22	YHR060W	LOS1	P33418	1100 aa	Predicted RBP	3.95	□□□□□ -1.78
VMA22	YHR060W	IST2	P38250	946 aa		3.95	□□□□□ -1.78
VMA22	YHR060W	GEP4	P38812	185 aa		3.95	□□□□□ -1.78
VMA22	YHR060W	CCT4	P39078	528 aa	Known RBP	3.95	□□□□□ -1.78
VMA22	YHR060W	PRM9	P39551	298 aa		3.95	□□□□□ -1.78
VMA22	YHR060W	MST28	P39552	234 aa		3.95	□□□□□ -1.78
VMA22	YHR060W	KEG1	P43614	200 aa		3.95	□□□□□ -1.78
VMA22	YHR060W	AIM24	P47127	394 aa		3.95	□□□□□ -1.78
VMA22	YHR060W	SEH1	P53011	349 aa	Known RBP	3.95	□□□□□ -1.78
VMA22	YHR060W	POP6	P53218	158 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms