RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W VHS1Q03785 461 aa3.3□□□□□ -1.88
BCD1YHR040W TRM12Q04235 462 aa3.3□□□□□ -1.88
BCD1YHR040W SEG1Q04279 960 aa3.3□□□□□ -1.88
BCD1YHR040W ARG7Q04728 441 aa3.3□□□□□ -1.88
BCD1YHR040W RQC1Q05468 723 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W DBP9Q06218 594 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W BSP1Q06604 576 aa3.3□□□□□ -1.88
BCD1YHR040W YPQ1Q12010 308 aa3.3□□□□□ -1.88
BCD1YHR040W RPN5Q12250 445 aaKnown RBP3.3□□□□□ -1.88
BCD1YHR040W YLR046CQ12253 270 aa3.3□□□□□ -1.88
BCD1YHR040W LAS17Q12446 633 aa3.3□□□□□ -1.88
BCD1YHR040W PFK27Q12471 397 aaPredicted RBP3.3□□□□□ -1.88
BCD1YHR040W MHF2Q3E829 80 aa3.3□□□□□ -1.88
BCD1YHR040W YCL012CQ8J0M4 134 aa3.3□□□□□ -1.88
BCD1YHR040W ECM29P38737 1868 aa3.29□□□□□ -1.88
BCD1YHR040W MDM35O60200 86 aa3.29□□□□□ -1.88
BCD1YHR040W HXK2P04807 486 aaKnown RBP3.29□□□□□ -1.88
BCD1YHR040W RAD7P06779 565 aa3.29□□□□□ -1.88
BCD1YHR040W UGA1P17649 471 aa3.29□□□□□ -1.88
BCD1YHR040W DPB2P24482 689 aaPredicted RBP3.29□□□□□ -1.88
BCD1YHR040W ERG4P25340 473 aa3.29□□□□□ -1.88
BCD1YHR040W PEX34P25584 144 aa3.29□□□□□ -1.88
BCD1YHR040W POL4P25615 582 aa3.29□□□□□ -1.88
BCD1YHR040W YCR061WP25639 631 aa3.29□□□□□ -1.88
BCD1YHR040W URK1P27515 501 aa3.29□□□□□ -1.88
BCD1YHR040W VMA6P32366 345 aaKnown RBP3.29□□□□□ -1.88
BCD1YHR040W SRB5P32585 307 aa3.29□□□□□ -1.88
BCD1YHR040W TIF3P34167 436 aaKnown RBP3.29□□□□□ -1.88
BCD1YHR040W SIF2P38262 535 aa3.29□□□□□ -1.88
BCD1YHR040W COS111P38308 924 aa3.29□□□□□ -1.88
BCD1YHR040W GND1P38720 489 aaKnown RBP3.29□□□□□ -1.88
BCD1YHR040W GOS1P38736 223 aa3.29□□□□□ -1.88
BCD1YHR040W FAD1P38913 306 aa3.29□□□□□ -1.88
BCD1YHR040W CCT6P39079 546 aa3.29□□□□□ -1.88
BCD1YHR040W MNN9P39107 395 aaKnown RBP3.29□□□□□ -1.88
BCD1YHR040W RGI1P40043 161 aaPredicted RBP3.29□□□□□ -1.88
BCD1YHR040W PCL7P40186 285 aa3.29□□□□□ -1.88
BCD1YHR040W MDE1P47095 244 aa3.29□□□□□ -1.88
BCD1YHR040W PYK2P52489 506 aaKnown RBP3.29□□□□□ -1.88
BCD1YHR040W RMR1P53060 241 aa3.29□□□□□ -1.88
BCD1YHR040W FLC3P53121 802 aa3.29□□□□□ -1.88
BCD1YHR040W MPS2P53159 387 aa3.29□□□□□ -1.88
BCD1YHR040W PXR1P53335 271 aaPredicted RBP3.29□□□□□ -1.88
BCD1YHR040W SUN4P53616 420 aa3.29□□□□□ -1.88
BCD1YHR040W ZRG17P53735 605 aa3.29□□□□□ -1.88
BCD1YHR040W YNL140CP53910 189 aa3.29□□□□□ -1.88
BCD1YHR040W RNY1Q02933 434 aaKnown RBP3.29□□□□□ -1.88
BCD1YHR040W RRN5Q02983 363 aa3.29□□□□□ -1.88
BCD1YHR040W CTK1Q03957 528 aaKnown RBP3.29□□□□□ -1.88
BCD1YHR040W DLT1Q04216 342 aa3.29□□□□□ -1.88
BCD1YHR040W MGR3Q04472 501 aa3.29□□□□□ -1.88
BCD1YHR040W YDR124WQ04608 324 aa3.29□□□□□ -1.88
BCD1YHR040W RIF2Q06208 395 aa3.29□□□□□ -1.88
BCD1YHR040W ARR3Q06598 404 aa3.29□□□□□ -1.88
BCD1YHR040W YFT2Q06676 274 aa3.29□□□□□ -1.88
BCD1YHR040W MFG1Q07684 458 aa3.29□□□□□ -1.88
BCD1YHR040W NSE1Q07913 336 aa3.29□□□□□ -1.88
BCD1YHR040W YPL272CQ08984 517 aa3.29□□□□□ -1.88
BCD1YHR040W PUS9Q12069 462 aa3.29□□□□□ -1.88
BCD1YHR040W ATG29Q12092 213 aa3.29□□□□□ -1.88
BCD1YHR040W SWT1Q12104 458 aa3.29□□□□□ -1.88
BCD1YHR040W MRH1Q12117 320 aaPredicted RBP3.29□□□□□ -1.88
BCD1YHR040W YOR342CQ12182 319 aa3.29□□□□□ -1.88
BCD1YHR040W PNS1Q12412 539 aa3.29□□□□□ -1.88
BCD1YHR040W AHC1Q12433 566 aa3.29□□□□□ -1.88
BCD1YHR040W RMD5Q12508 421 aa3.29□□□□□ -1.88
BCD1YHR040W SRN2Q99176 213 aa3.29□□□□□ -1.88
BCD1YHR040W MED11Q99278 115 aa3.29□□□□□ -1.88
BCD1YHR040W ISN1Q99312 450 aa3.29□□□□□ -1.88
BCD1YHR040W Q0010Q9ZZX9 128 aa3.29□□□□□ -1.88
BCD1YHR040W STE3P06783 470 aa3.28□□□□□ -1.88
BCD1YHR040W COR1P07256 457 aa3.28□□□□□ -1.88
BCD1YHR040W YAR066WP0CX18 203 aa3.28□□□□□ -1.88
BCD1YHR040W YHR214WP0CX19 203 aa3.28□□□□□ -1.88
BCD1YHR040W RAP1P11938 827 aa3.28□□□□□ -1.88
BCD1YHR040W STE12P13574 688 aa3.28□□□□□ -1.88
BCD1YHR040W POL30P15873 258 aaKnown RBP3.28□□□□□ -1.88
BCD1YHR040W ARF2P19146 181 aaKnown RBP3.28□□□□□ -1.88
BCD1YHR040W DBP3P20447 523 aaKnown RBP3.28□□□□□ -1.88
BCD1YHR040W EPT1P22140 391 aa3.28□□□□□ -1.88
BCD1YHR040W GRR1P24814 1151 aa3.28□□□□□ -1.88
BCD1YHR040W PRP21P32524 280 aaPredicted RBP3.28□□□□□ -1.88
BCD1YHR040W RPT5P33297 434 aaKnown RBP3.28□□□□□ -1.88
BCD1YHR040W ECM4P36156 370 aa3.28□□□□□ -1.88
BCD1YHR040W ECM10P39987 644 aa3.28□□□□□ -1.88
BCD1YHR040W HEM14P40012 539 aa3.28□□□□□ -1.88
BCD1YHR040W YJL070CP40361 888 aa3.28□□□□□ -1.88
BCD1YHR040W PAN6P40459 309 aa3.28□□□□□ -1.88
BCD1YHR040W MOB1P40484 314 aa3.28□□□□□ -1.88
BCD1YHR040W TES1P41903 349 aaKnown RBP3.28□□□□□ -1.88
BCD1YHR040W CAK1P43568 368 aaPredicted RBP3.28□□□□□ -1.88
BCD1YHR040W GLG2P47011 380 aa3.28□□□□□ -1.88
BCD1YHR040W BNA3P47039 444 aaKnown RBP3.28□□□□□ -1.88
BCD1YHR040W AIM22P47051 409 aa3.28□□□□□ -1.88
BCD1YHR040W YJR149WP47177 404 aa3.28□□□□□ -1.88
BCD1YHR040W AMA1P50082 593 aa3.28□□□□□ -1.88
BCD1YHR040W SWC4P53201 476 aa3.28□□□□□ -1.88
BCD1YHR040W COG5P53951 403 aa3.28□□□□□ -1.88
BCD1YHR040W YMR111CQ04461 462 aaPredicted RBP3.28□□□□□ -1.88
BCD1YHR040W DPB4Q04603 196 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms