RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C GIP2P40036 548 aa5.35□□□□□ -1.55
SEC20YDR498C SNM1P40993 198 aa5.35□□□□□ -1.55
SEC20YDR498C RPL10P41805 221 aaKnown RBP5.35□□□□□ -1.55
SEC20YDR498C YNR014WP53719 212 aa5.35□□□□□ -1.55
SEC20YDR498C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
SEC20YDR498C RIM13Q03792 727 aa5.35□□□□□ -1.55
SEC20YDR498C RNH1Q04740 348 aa5.35□□□□□ -1.55
SEC20YDR498C VPS36Q06696 566 aa5.35□□□□□ -1.55
SEC20YDR498C YTM1Q12024 460 aaPredicted RBP5.35□□□□□ -1.55
SEC20YDR498C YMR084WA2P2R3 262 aa5.34□□□□□ -1.55
SEC20YDR498C MDM35O60200 86 aa5.34□□□□□ -1.55
SEC20YDR498C MET2P08465 486 aa5.34□□□□□ -1.55
SEC20YDR498C HOM2P13663 365 aaKnown RBP5.34□□□□□ -1.55
SEC20YDR498C THR1P17423 357 aaKnown RBP5.34□□□□□ -1.55
SEC20YDR498C FPS1P23900 669 aa5.34□□□□□ -1.55
SEC20YDR498C YCR100CP25606 316 aa5.34□□□□□ -1.55
SEC20YDR498C TAH1P25638 111 aaPredicted RBP5.34□□□□□ -1.55
SEC20YDR498C ARO7P32178 256 aa5.34□□□□□ -1.55
SEC20YDR498C PRO1P32264 428 aa5.34□□□□□ -1.55
SEC20YDR498C PRP19P32523 503 aaKnown RBP5.34□□□□□ -1.55
SEC20YDR498C CDC13P32797 924 aaKnown RBP5.34□□□□□ -1.55
SEC20YDR498C SEC66P33754 206 aa5.34□□□□□ -1.55
SEC20YDR498C RTC2P38279 296 aa5.34□□□□□ -1.55
SEC20YDR498C YBR197CP38306 217 aa5.34□□□□□ -1.55
SEC20YDR498C BIG1P38813 335 aa5.34□□□□□ -1.55
SEC20YDR498C MNL1P38888 796 aa5.34□□□□□ -1.55
SEC20YDR498C YEL068CP39977 110 aa5.34□□□□□ -1.55
SEC20YDR498C IES5P40060 125 aa5.34□□□□□ -1.55
SEC20YDR498C SWP82P43554 623 aa5.34□□□□□ -1.55
SEC20YDR498C MAL11P53048 616 aa5.34□□□□□ -1.55
SEC20YDR498C YGR168CP53293 376 aa5.34□□□□□ -1.55
SEC20YDR498C RSM24Q03976 319 aa5.34□□□□□ -1.55
SEC20YDR498C RRP17Q04031 235 aaPredicted RBP5.34□□□□□ -1.55
SEC20YDR498C GAL83Q04739 417 aa5.34□□□□□ -1.55
SEC20YDR498C STP3Q05937 343 aa5.34□□□□□ -1.55
SEC20YDR498C BOP2Q06150 570 aa5.34□□□□□ -1.55
SEC20YDR498C XYL2Q07993 356 aa5.34□□□□□ -1.55
SEC20YDR498C MSH5Q12175 901 aa5.34□□□□□ -1.55
SEC20YDR498C RPS21BQ3E754 87 aaKnown RBP5.34□□□□□ -1.55
SEC20YDR498C SEC16P48415 2195 aaKnown RBP5.33□□□□□ -1.56
SEC20YDR498C COX3P00420 269 aa5.33□□□□□ -1.56
SEC20YDR498C TFS1P14306 219 aa5.33□□□□□ -1.56
SEC20YDR498C MCK1P21965 375 aaKnown RBP5.33□□□□□ -1.56
SEC20YDR498C RRP7P25368 297 aaPredicted RBP5.33□□□□□ -1.56
SEC20YDR498C MXR2P25566 168 aa5.33□□□□□ -1.56
SEC20YDR498C MGR1P25573 417 aa5.33□□□□□ -1.56
SEC20YDR498C OAC1P32332 324 aa5.33□□□□□ -1.56
SEC20YDR498C NDC1P32500 655 aa5.33□□□□□ -1.56
SEC20YDR498C ISC10P32645 267 aa5.33□□□□□ -1.56
SEC20YDR498C DOM34P33309 386 aa5.33□□□□□ -1.56
SEC20YDR498C OMA1P36163 345 aa5.33□□□□□ -1.56
SEC20YDR498C YLF2P38746 405 aa5.33□□□□□ -1.56
SEC20YDR498C CTF8P38877 133 aa5.33□□□□□ -1.56
SEC20YDR498C YJL068CP40363 299 aa5.33□□□□□ -1.56
SEC20YDR498C JHD2P47156 728 aaPredicted RBP5.33□□□□□ -1.56
SEC20YDR498C VPS73P53142 486 aaKnown RBP5.33□□□□□ -1.56
SEC20YDR498C RBG2P53295 368 aaKnown RBP5.33□□□□□ -1.56
SEC20YDR498C ESF2P53743 316 aaKnown RBP5.33□□□□□ -1.56
SEC20YDR498C NUP49Q02199 472 aa5.33□□□□□ -1.56
SEC20YDR498C MAK3Q03503 176 aa5.33□□□□□ -1.56
SEC20YDR498C ARP10Q04549 284 aa5.33□□□□□ -1.56
SEC20YDR498C ELP6Q04868 273 aa5.33□□□□□ -1.56
SEC20YDR498C ENT2Q05785 613 aa5.33□□□□□ -1.56
SEC20YDR498C SKI7Q08491 747 aaPredicted RBP5.33□□□□□ -1.56
SEC20YDR498C DIN7Q12086 430 aa5.33□□□□□ -1.56
SEC20YDR498C SFM1Q12314 213 aa5.33□□□□□ -1.56
SEC20YDR498C RRP12Q12754 1228 aaKnown RBP5.33□□□□□ -1.56
SEC20YDR498C YOR019WQ99248 730 aa5.33□□□□□ -1.56
SEC20YDR498C CBS1P14066 229 aa5.32□□□□□ -1.56
SEC20YDR498C AAC3P18238 307 aa5.32□□□□□ -1.56
SEC20YDR498C RPB5P20434 215 aa5.32□□□□□ -1.56
SEC20YDR498C KGD1P20967 1014 aaKnown RBP5.32□□□□□ -1.56
SEC20YDR498C CLB2P24869 491 aa5.32□□□□□ -1.56
SEC20YDR498C STP22P25604 385 aa5.32□□□□□ -1.56
SEC20YDR498C YMC1P32331 307 aa5.32□□□□□ -1.56
SEC20YDR498C KAP122P32767 1081 aa5.32□□□□□ -1.56
SEC20YDR498C NPL6P32832 435 aa5.32□□□□□ -1.56
SEC20YDR498C YHR112CP38716 378 aa5.32□□□□□ -1.56
SEC20YDR498C SBE22P38814 852 aa5.32□□□□□ -1.56
SEC20YDR498C ANS1P38832 159 aa5.32□□□□□ -1.56
SEC20YDR498C ELO1P39540 310 aa5.32□□□□□ -1.56
SEC20YDR498C PCL6P40038 420 aa5.32□□□□□ -1.56
SEC20YDR498C YIL152WP40455 235 aa5.32□□□□□ -1.56
SEC20YDR498C YPS6P40583 537 aa5.32□□□□□ -1.56
SEC20YDR498C SSY5P47002 699 aa5.32□□□□□ -1.56
SEC20YDR498C BPL1P48445 690 aaPredicted RBP5.32□□□□□ -1.56
SEC20YDR498C RBL2P48606 106 aaKnown RBP5.32□□□□□ -1.56
SEC20YDR498C CWC23P52868 283 aaPredicted RBP5.32□□□□□ -1.56
SEC20YDR498C MPC1P53157 130 aaKnown RBP5.32□□□□□ -1.56
SEC20YDR498C TPC1P53257 314 aa5.32□□□□□ -1.56
SEC20YDR498C CPR8P53728 308 aa5.32□□□□□ -1.56
SEC20YDR498C SRL4Q03085 281 aa5.32□□□□□ -1.56
SEC20YDR498C ERB1Q04660 807 aaKnown RBP5.32□□□□□ -1.56
SEC20YDR498C YLR446WQ06204 433 aa5.32□□□□□ -1.56
SEC20YDR498C NGL1Q08213 363 aaKnown RBP5.32□□□□□ -1.56
SEC20YDR498C CRT10Q08226 957 aa5.32□□□□□ -1.56
SEC20YDR498C RCN2Q12044 265 aa5.32□□□□□ -1.56
SEC20YDR498C YDL211CQ12121 372 aa5.32□□□□□ -1.56
SEC20YDR498C RBD2Q12270 262 aa5.32□□□□□ -1.56
SEC20YDR498C PNS1Q12412 539 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms