RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W RNA1P11745 407 aaKnown RBP2.57□□□□□ -2
RSM28YDR494W FUN26P31381 517 aa2.57□□□□□ -2
RSM28YDR494W TOA2P32774 122 aa2.57□□□□□ -2
RSM28YDR494W SPO23P33757 523 aa2.57□□□□□ -2
RSM28YDR494W WSS1P38838 269 aa2.57□□□□□ -2
RSM28YDR494W PFS1P38872 237 aa2.57□□□□□ -2
RSM28YDR494W TIM17P39515 158 aa2.57□□□□□ -2
RSM28YDR494W AIP1P46680 615 aaKnown RBP2.57□□□□□ -2
RSM28YDR494W MKC7P53379 596 aa2.57□□□□□ -2
RSM28YDR494W MRPS16Q02608 121 aa2.57□□□□□ -2
RSM28YDR494W YMR010WQ03687 405 aa2.57□□□□□ -2
RSM28YDR494W RPL6BP05739 176 aaKnown RBP2.56□□□□□ -2
RSM28YDR494W ZRC1P20107 442 aa2.56□□□□□ -2
RSM28YDR494W GPI18P38211 433 aa2.56□□□□□ -2
RSM28YDR494W YHR177WP38867 453 aa2.56□□□□□ -2
RSM28YDR494W SEC27P41811 889 aaKnown RBP2.56□□□□□ -2
RSM28YDR494W ABM1P47146 123 aa2.56□□□□□ -2
RSM28YDR494W MLC1P53141 149 aa2.56□□□□□ -2
RSM28YDR494W REX2P54964 269 aaKnown RBP2.56□□□□□ -2
RSM28YDR494W RPL6AQ02326 176 aaKnown RBP2.56□□□□□ -2
RSM28YDR494W NOP6Q07623 225 aaKnown RBP2.56□□□□□ -2
RSM28YDR494W DNL4Q08387 944 aaPredicted RBP2.56□□□□□ -2
RSM28YDR494W HMS1Q12398 434 aa2.56□□□□□ -2
RSM28YDR494W PRB1P09232 635 aa2.55□□□□□ -2
RSM28YDR494W RPS18AP0CX55 146 aaKnown RBP2.55□□□□□ -2
RSM28YDR494W RPS18BP0CX56 146 aaPredicted RBP2.55□□□□□ -2
RSM28YDR494W DEP1P31385 405 aa2.55□□□□□ -2
RSM28YDR494W IGD1P43598 195 aa2.55□□□□□ -2
RSM28YDR494W TRF5P48561 642 aaKnown RBP2.55□□□□□ -2
RSM28YDR494W VHS1Q03785 461 aa2.55□□□□□ -2
RSM28YDR494W YFH1Q07540 174 aa2.55□□□□□ -2
RSM28YDR494W FOL3Q12676 427 aaPredicted RBP2.55□□□□□ -2
RSM28YDR494W MRPL8P22353 238 aa2.54□□□□□ -2
RSM28YDR494W PUP2P32379 260 aa2.54□□□□□ -2
RSM28YDR494W YBL028CP38202 106 aa2.54□□□□□ -2
RSM28YDR494W RXT2P38255 430 aa2.54□□□□□ -2
RSM28YDR494W LSM12P38828 187 aaKnown RBP2.54□□□□□ -2
RSM28YDR494W KTR6P54070 446 aa2.54□□□□□ -2
RSM28YDR494W STE7P06784 515 aa2.53□□□□□ -2
RSM28YDR494W GIT1P25346 518 aa2.53□□□□□ -2
RSM28YDR494W GDT1P38301 280 aaPredicted RBP2.53□□□□□ -2
RSM28YDR494W WSC4P38739 605 aa2.53□□□□□ -2
RSM28YDR494W YGL262WP53054 175 aa2.53□□□□□ -2
RSM28YDR494W YPS5P53057 165 aa2.53□□□□□ -2
RSM28YDR494W RCF1Q03713 159 aa2.53□□□□□ -2
RSM28YDR494W MSC3Q05812 728 aa2.53□□□□□ -2
RSM28YDR494W YHC1Q05900 231 aaKnown RBP2.53□□□□□ -2
RSM28YDR494W MCH1Q07376 486 aa2.53□□□□□ -2
RSM28YDR494W GAT3Q07928 141 aa2.53□□□□□ -2
RSM28YDR494W PEX27Q08580 376 aa2.53□□□□□ -2
RSM28YDR494W CMK2P22517 447 aa2.52□□□□□ -2.01
RSM28YDR494W SOL2P37262 315 aa2.52□□□□□ -2.01
RSM28YDR494W MRPS9P38120 278 aa2.52□□□□□ -2.01
RSM28YDR494W SEO1P39709 593 aa2.52□□□□□ -2.01
RSM28YDR494W ALD5P40047 520 aaKnown RBP2.52□□□□□ -2.01
RSM28YDR494W SNL1P40548 159 aa2.52□□□□□ -2.01
RSM28YDR494W CIN2P46670 268 aa2.52□□□□□ -2.01
RSM28YDR494W CWC22P53333 577 aaKnown RBP2.52□□□□□ -2.01
RSM28YDR494W EOS1P53938 366 aa2.52□□□□□ -2.01
RSM28YDR494W ENT5Q03769 411 aaKnown RBP2.52□□□□□ -2.01
RSM28YDR494W SHS1Q07657 551 aa2.52□□□□□ -2.01
RSM28YDR494W YPQ1Q12010 308 aa2.52□□□□□ -2.01
RSM28YDR494W TFB5Q3E7C1 72 aaPredicted RBP2.52□□□□□ -2.01
RSM28YDR494W HSP82P02829 709 aaKnown RBP2.51□□□□□ -2.01
RSM28YDR494W CBP6P07253 162 aaPredicted RBP2.51□□□□□ -2.01
RSM28YDR494W CHA1P25379 360 aaKnown RBP2.51□□□□□ -2.01
RSM28YDR494W RPL16AP26784 199 aaKnown RBP2.51□□□□□ -2.01
RSM28YDR494W PSO2P30620 661 aa2.51□□□□□ -2.01
RSM28YDR494W SSE1P32589 693 aaKnown RBP2.51□□□□□ -2.01
RSM28YDR494W YSW1P38280 609 aa2.51□□□□□ -2.01
RSM28YDR494W SEC9P40357 651 aa2.51□□□□□ -2.01
RSM28YDR494W LYS12P40495 371 aaKnown RBP2.51□□□□□ -2.01
RSM28YDR494W KEG1P43614 200 aa2.51□□□□□ -2.01
RSM28YDR494W PGU1P47180 361 aa2.51□□□□□ -2.01
RSM28YDR494W TPS1Q00764 495 aaKnown RBP2.51□□□□□ -2.01
RSM28YDR494W MCT1Q12283 360 aa2.51□□□□□ -2.01
RSM28YDR494W YBL111CQ3E7Y5 667 aa2.51□□□□□ -2.01
RSM28YDR494W YOR338WQ99326 363 aa2.51□□□□□ -2.01
RSM28YDR494W ADH1P00330 348 aaKnown RBP2.5□□□□□ -2.01
RSM28YDR494W SCH9P11792 824 aaKnown RBP2.5□□□□□ -2.01
RSM28YDR494W MSP1P28737 362 aa2.5□□□□□ -2.01
RSM28YDR494W MSK1P32048 576 aa2.5□□□□□ -2.01
RSM28YDR494W EFB1P32471 206 aaKnown RBP2.5□□□□□ -2.01
RSM28YDR494W BMT2P38278 337 aa2.5□□□□□ -2.01
RSM28YDR494W CTK3P46963 296 aaPredicted RBP2.5□□□□□ -2.01
RSM28YDR494W MPS2P53159 387 aa2.5□□□□□ -2.01
RSM28YDR494W YGR018CP53211 109 aa2.5□□□□□ -2.01
RSM28YDR494W RET3P53600 189 aa2.5□□□□□ -2.01
RSM28YDR494W PRP38Q00723 242 aaPredicted RBP2.5□□□□□ -2.01
RSM28YDR494W ECM11Q04110 302 aa2.5□□□□□ -2.01
RSM28YDR494W FSH2Q05015 223 aa2.5□□□□□ -2.01
RSM28YDR494W YLR177WQ06251 628 aa2.5□□□□□ -2.01
RSM28YDR494W YLH47Q06493 454 aa2.5□□□□□ -2.01
RSM28YDR494W YDL109CQ12103 647 aa2.5□□□□□ -2.01
RSM28YDR494W FRE6Q12473 712 aa2.5□□□□□ -2.01
RSM28YDR494W HEM4P06174 275 aa2.49□□□□□ -2.01
RSM28YDR494W DBR1P24309 405 aaKnown RBP2.49□□□□□ -2.01
RSM28YDR494W FAA1P30624 700 aaKnown RBP2.49□□□□□ -2.01
RSM28YDR494W LDS1P31379 325 aa2.49□□□□□ -2.01
RSM28YDR494W DAD2P36162 133 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms