RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT3	YDR394W	RPN13	O13563	156 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	CDC31	P06704	161 aa	Known RBP	5.69	□□□□□ -1.5
RPT3	YDR394W	IDP1	P21954	428 aa	Known RBP	5.69	□□□□□ -1.5
RPT3	YDR394W	ADE1	P27616	306 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	YIM1	P28625	365 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	LHP1	P33399	275 aa	Known RBP	5.69	□□□□□ -1.5
RPT3	YDR394W	ASC1	P38011	319 aa	Known RBP	5.69	□□□□□ -1.5
RPT3	YDR394W	TRM7	P38238	310 aa	Known RBP	5.69	□□□□□ -1.5
RPT3	YDR394W	GDH3	P39708	457 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	FCY21	P40039	528 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	BUR6	P40096	142 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	YJL068C	P40363	299 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	RET2	P43621	546 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	YGR168C	P53293	376 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	YGR250C	P53316	781 aa	Known RBP	5.69	□□□□□ -1.5
RPT3	YDR394W	AQR1	P53943	586 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	YSA1	Q01976	231 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	NUP49	Q02199	472 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	ROY1	Q04847	553 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	YLR446W	Q06204	433 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	GSH2	Q08220	491 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	NBA1	Q08229	501 aa	Known RBP	5.69	□□□□□ -1.5
RPT3	YDR394W	PUS9	Q12069	462 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	RBD2	Q12270	262 aa		5.69	□□□□□ -1.5
RPT3	YDR394W	DCP1	Q12517	231 aa	Predicted RBP	5.69	□□□□□ -1.5
RPT3	YDR394W	HIS5	P07172	385 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	NFT1	P0CE68	1218 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	ZWF1	P11412	505 aa	Known RBP	5.68	□□□□□ -1.5
RPT3	YDR394W	SCL1	P21243	252 aa	Known RBP	5.68	□□□□□ -1.5
RPT3	YDR394W	BUD5	P25300	642 aa	Predicted RBP	5.68	□□□□□ -1.5
RPT3	YDR394W	GIT1	P25346	518 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	HIR2	P32480	875 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	RPN2	P32565	945 aa	Known RBP	5.68	□□□□□ -1.5
RPT3	YDR394W	GPX2	P38143	162 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	CCZ1	P38273	704 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	DED81	P38707	554 aa	Known RBP	5.68	□□□□□ -1.5
RPT3	YDR394W	YHR112C	P38716	378 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	SNM1	P40993	198 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	AZF1	P41696	914 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	YFL054C	P43549	646 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	HOC1	P47124	396 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	HMS2	P47175	358 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	RAD17	P48581	401 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	IMD3	P50095	523 aa	Known RBP	5.68	□□□□□ -1.5
RPT3	YDR394W	SGF73	P53165	657 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	YGR079W	P53249	370 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	GRX5	Q02784	150 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	KRE28	Q04431	385 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	OPI10	Q08202	246 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	NGL1	Q08213	363 aa	Known RBP	5.68	□□□□□ -1.5
RPT3	YDR394W	SAM4	Q08985	325 aa	Known RBP	5.68	□□□□□ -1.5
RPT3	YDR394W	RCN2	Q12044	265 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	SIA1	Q12212	622 aa		5.68	□□□□□ -1.5
RPT3	YDR394W	HRP1	Q99383	534 aa	Known RBP	5.68	□□□□□ -1.5
RPT3	YDR394W	CET1	O13297	549 aa	Predicted RBP	5.67	□□□□□ -1.5
RPT3	YDR394W	RPS14A	P06367	137 aa	Known RBP	5.67	□□□□□ -1.5
RPT3	YDR394W	KIN2	P13186	1147 aa	Known RBP	5.67	□□□□□ -1.5
RPT3	YDR394W	SPT15	P13393	240 aa	Known RBP	5.67	□□□□□ -1.5
RPT3	YDR394W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected
RPT3	YDR394W	PET9	P18239	318 aa	Known RBP	5.67	□□□□□ -1.5
RPT3	YDR394W	GSH1	P32477	678 aa		5.67	□□□□□ -1.5
RPT3	YDR394W	MKK1	P32490	508 aa		5.67	□□□□□ -1.5
RPT3	YDR394W	PET309	P32522	965 aa	Predicted RBP	5.67	□□□□□ -1.5
RPT3	YDR394W	TEF4	P36008	412 aa	Known RBP	5.67	□□□□□ -1.5
RPT3	YDR394W	DOA1	P36037	715 aa		5.67	□□□□□ -1.5
RPT3	YDR394W	BNA4	P38169	460 aa		5.67	□□□□□ -1.5
RPT3	YDR394W	AIM3	P38266	947 aa	Known RBP	5.67	□□□□□ -1.5
RPT3	YDR394W	BIG1	P38813	335 aa		5.67	□□□□□ -1.5
RPT3	YDR394W	MET30	P39014	640 aa		5.67	□□□□□ -1.5
RPT3	YDR394W	RPS14B	P39516	138 aa	Known RBP	5.67	□□□□□ -1.5
RPT3	YDR394W	FAU1	P40099	211 aa		5.67	□□□□□ -1.5
RPT3	YDR394W	LYS12	P40495	371 aa	Known RBP	5.67	□□□□□ -1.5
RPT3	YDR394W	CHA4	P43634	648 aa		5.67	□□□□□ -1.5
RPT3	YDR394W	SSY5	P47002	699 aa		5.67	□□□□□ -1.5
RPT3	YDR394W	EXG2	P52911	562 aa		5.67	□□□□□ -1.5
RPT3	YDR394W	NPY1	P53164	384 aa		5.67	□□□□□ -1.5
RPT3	YDR394W	YPL113C	Q02961	396 aa		5.67	□□□□□ -1.5
RPT3	YDR394W	CTK1	Q03957	528 aa	Known RBP	5.67	□□□□□ -1.5
RPT3	YDR394W	YMR310C	Q04867	317 aa	Predicted RBP	5.67	□□□□□ -1.5
RPT3	YDR394W	RRP40	Q08285	240 aa	Known RBP	5.67	□□□□□ -1.5
RPT3	YDR394W	YTM1	Q12024	460 aa	Predicted RBP	5.67	□□□□□ -1.5
RPT3	YDR394W	YOR114W	Q12219	294 aa		5.67	□□□□□ -1.5
RPT3	YDR394W	YPR064W	Q12492	139 aa		5.67	□□□□□ -1.5
RPT3	YDR394W	UBR1	P19812	1950 aa		5.67	□□□□□ -1.5
RPT3	YDR394W	RPC40	P07703	335 aa	Known RBP	5.66	□□□□□ -1.5
RPT3	YDR394W	GCN3	P14741	305 aa		5.66	□□□□□ -1.5
RPT3	YDR394W	BET2	P20133	325 aa		5.66	□□□□□ -1.5
RPT3	YDR394W	RPL24B	P24000	155 aa	Known RBP	5.66	□□□□□ -1.5
RPT3	YDR394W	ARE1	P25628	610 aa		5.66	□□□□□ -1.5
RPT3	YDR394W	OAC1	P32332	324 aa		5.66	□□□□□ -1.5
RPT3	YDR394W	DHR2	P36009	735 aa	Predicted RBP	5.66	□□□□□ -1.5
RPT3	YDR394W	RCN1	P36054	211 aa		5.66	□□□□□ -1.5
RPT3	YDR394W	APT2	P36973	181 aa		5.66	□□□□□ -1.5
RPT3	YDR394W	SBE22	P38814	852 aa		5.66	□□□□□ -1.5
RPT3	YDR394W	CTF8	P38877	133 aa		5.66	□□□□□ -1.5
RPT3	YDR394W	PCL6	P40038	420 aa		5.66	□□□□□ -1.5
RPT3	YDR394W	JHD2	P47156	728 aa	Predicted RBP	5.66	□□□□□ -1.5
RPT3	YDR394W	UBC9	P50623	157 aa	Predicted RBP	5.66	□□□□□ -1.5
RPT3	YDR394W	RAI1	P53063	387 aa	Known RBP	5.66	□□□□□ -1.5
RPT3	YDR394W	CPR8	P53728	308 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms