RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C SPP381P38282 291 aaPredicted RBP2.92□□□□□ -1.94
RUB1YDR139C GDT1P38301 280 aaPredicted RBP2.92□□□□□ -1.94
RUB1YDR139C YMR010WQ03687 405 aa2.92□□□□□ -1.94
RUB1YDR139C YFH1Q07540 174 aa2.92□□□□□ -1.94
RUB1YDR139C DNL4Q08387 944 aaPredicted RBP2.92□□□□□ -1.94
RUB1YDR139C RPL6BP05739 176 aaKnown RBP2.91□□□□□ -1.94
RUB1YDR139C PRB1P09232 635 aa2.91□□□□□ -1.94
RUB1YDR139C ZRC1P20107 442 aa2.91□□□□□ -1.94
RUB1YDR139C MRPL8P22353 238 aa2.91□□□□□ -1.94
RUB1YDR139C DEP1P31385 405 aa2.91□□□□□ -1.94
RUB1YDR139C WSS1P38838 269 aa2.91□□□□□ -1.94
RUB1YDR139C YHR177WP38867 453 aa2.91□□□□□ -1.94
RUB1YDR139C TIM17P39515 158 aa2.91□□□□□ -1.94
RUB1YDR139C SEC27P41811 889 aaKnown RBP2.91□□□□□ -1.94
RUB1YDR139C ABM1P47146 123 aa2.91□□□□□ -1.94
RUB1YDR139C TRF5P48561 642 aaKnown RBP2.91□□□□□ -1.94
RUB1YDR139C REX2P54964 269 aaKnown RBP2.91□□□□□ -1.94
RUB1YDR139C RPL6AQ02326 176 aaKnown RBP2.91□□□□□ -1.94
RUB1YDR139C MRPS16Q02608 121 aa2.91□□□□□ -1.94
RUB1YDR139C YDR061WQ12298 539 aa2.91□□□□□ -1.94
RUB1YDR139C HMS1Q12398 434 aa2.91□□□□□ -1.94
RUB1YDR139C YBL028CP38202 106 aa2.9□□□□□ -1.95
RUB1YDR139C GPI18P38211 433 aa2.9□□□□□ -1.95
RUB1YDR139C LSM12P38828 187 aaKnown RBP2.9□□□□□ -1.95
RUB1YDR139C PFS1P38872 237 aa2.9□□□□□ -1.95
RUB1YDR139C MKC7P53379 596 aa2.9□□□□□ -1.95
RUB1YDR139C VHS1Q03785 461 aa2.9□□□□□ -1.95
RUB1YDR139C STE7P06784 515 aa2.89□□□□□ -1.95
RUB1YDR139C RPS18AP0CX55 146 aaKnown RBP2.89□□□□□ -1.95
RUB1YDR139C RPS18BP0CX56 146 aaPredicted RBP2.89□□□□□ -1.95
RUB1YDR139C GIT1P25346 518 aa2.89□□□□□ -1.95
RUB1YDR139C ALD5P40047 520 aaKnown RBP2.89□□□□□ -1.95
RUB1YDR139C IGD1P43598 195 aa2.89□□□□□ -1.95
RUB1YDR139C YPS5P53057 165 aa2.89□□□□□ -1.95
RUB1YDR139C FOL3Q12676 427 aaPredicted RBP2.89□□□□□ -1.95
RUB1YDR139C HSP82P02829 709 aaKnown RBP2.88□□□□□ -1.95
RUB1YDR139C RXT2P38255 430 aa2.88□□□□□ -1.95
RUB1YDR139C CWC22P53333 577 aaKnown RBP2.88□□□□□ -1.95
RUB1YDR139C KTR6P54070 446 aa2.88□□□□□ -1.95
RUB1YDR139C RCF1Q03713 159 aa2.88□□□□□ -1.95
RUB1YDR139C MSC3Q05812 728 aa2.88□□□□□ -1.95
RUB1YDR139C YHC1Q05900 231 aaKnown RBP2.88□□□□□ -1.95
RUB1YDR139C TFB5Q3E7C1 72 aaPredicted RBP2.88□□□□□ -1.95
RUB1YDR139C CBP6P07253 162 aaPredicted RBP2.87□□□□□ -1.95
RUB1YDR139C RPL16AP26784 199 aaKnown RBP2.87□□□□□ -1.95
RUB1YDR139C MRPS9P38120 278 aa2.87□□□□□ -1.95
RUB1YDR139C SEC9P40357 651 aa2.87□□□□□ -1.95
RUB1YDR139C LYS12P40495 371 aaKnown RBP2.87□□□□□ -1.95
RUB1YDR139C SHS1Q07657 551 aa2.87□□□□□ -1.95
RUB1YDR139C GAT3Q07928 141 aa2.87□□□□□ -1.95
RUB1YDR139C PEX27Q08580 376 aa2.87□□□□□ -1.95
RUB1YDR139C CMK2P22517 447 aa2.86□□□□□ -1.95
RUB1YDR139C CHA1P25379 360 aaKnown RBP2.86□□□□□ -1.95
RUB1YDR139C PSO2P30620 661 aa2.86□□□□□ -1.95
RUB1YDR139C EFB1P32471 206 aaKnown RBP2.86□□□□□ -1.95
RUB1YDR139C SSE1P32589 693 aaKnown RBP2.86□□□□□ -1.95
RUB1YDR139C SOL2P37262 315 aa2.86□□□□□ -1.95
RUB1YDR139C BMT2P38278 337 aa2.86□□□□□ -1.95
RUB1YDR139C YSW1P38280 609 aa2.86□□□□□ -1.95
RUB1YDR139C SEO1P39709 593 aa2.86□□□□□ -1.95
RUB1YDR139C KEG1P43614 200 aa2.86□□□□□ -1.95
RUB1YDR139C CIN2P46670 268 aa2.86□□□□□ -1.95
RUB1YDR139C YGL262WP53054 175 aa2.86□□□□□ -1.95
RUB1YDR139C VHT1P53241 593 aa2.86□□□□□ -1.95
RUB1YDR139C EOS1P53938 366 aa2.86□□□□□ -1.95
RUB1YDR139C TPS1Q00764 495 aaKnown RBP2.86□□□□□ -1.95
RUB1YDR139C ENT5Q03769 411 aaKnown RBP2.86□□□□□ -1.95
RUB1YDR139C MCH1Q07376 486 aa2.86□□□□□ -1.95
RUB1YDR139C MCT1Q12283 360 aa2.86□□□□□ -1.95
RUB1YDR139C SFM1Q12314 213 aa2.86□□□□□ -1.95
RUB1YDR139C SKS1Q12505 502 aa2.86□□□□□ -1.95
RUB1YDR139C HEM4P06174 275 aa2.85□□□□□ -1.95
RUB1YDR139C MSP1P28737 362 aa2.85□□□□□ -1.95
RUB1YDR139C MSK1P32048 576 aa2.85□□□□□ -1.95
RUB1YDR139C DAD2P36162 133 aa2.85□□□□□ -1.95
RUB1YDR139C PGU1P47180 361 aa2.85□□□□□ -1.95
RUB1YDR139C MPS2P53159 387 aa2.85□□□□□ -1.95
RUB1YDR139C RET3P53600 189 aa2.85□□□□□ -1.95
RUB1YDR139C VAC7P53950 1165 aa2.85□□□□□ -1.95
RUB1YDR139C PRP38Q00723 242 aaPredicted RBP2.85□□□□□ -1.95
RUB1YDR139C ECM11Q04110 302 aa2.85□□□□□ -1.95
RUB1YDR139C YPQ1Q12010 308 aa2.85□□□□□ -1.95
RUB1YDR139C YDL109CQ12103 647 aa2.85□□□□□ -1.95
RUB1YDR139C YBL111CQ3E7Y5 667 aa2.85□□□□□ -1.95
RUB1YDR139C SCH9P11792 824 aaKnown RBP2.84□□□□□ -1.95
RUB1YDR139C MAS2P11914 482 aa2.84□□□□□ -1.95
RUB1YDR139C FAA1P30624 700 aaKnown RBP2.84□□□□□ -1.95
RUB1YDR139C LDS1P31379 325 aa2.84□□□□□ -1.95
RUB1YDR139C VAM7P32912 316 aa2.84□□□□□ -1.95
RUB1YDR139C MRPL27P36526 146 aaPredicted RBP2.84□□□□□ -1.95
RUB1YDR139C WSC4P38739 605 aa2.84□□□□□ -1.95
RUB1YDR139C YHR182WP38870 785 aa2.84□□□□□ -1.95
RUB1YDR139C SNL1P40548 159 aa2.84□□□□□ -1.95
RUB1YDR139C CTK3P46963 296 aaPredicted RBP2.84□□□□□ -1.95
RUB1YDR139C FSH2Q05015 223 aa2.84□□□□□ -1.95
RUB1YDR139C YLH47Q06493 454 aa2.84□□□□□ -1.95
RUB1YDR139C YPR078CQ06813 372 aa2.84□□□□□ -1.95
RUB1YDR139C FRE6Q12473 712 aa2.84□□□□□ -1.95
RUB1YDR139C YDL012CQ12489 107 aa2.84□□□□□ -1.95
RUB1YDR139C YOR338WQ99326 363 aa2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms