RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C RPC17P47076 161 aa3.99□□□□□ -1.77
CDC9YDL164C NBP1P52919 319 aaPredicted RBP3.99□□□□□ -1.77
CDC9YDL164C OKP1P53298 406 aa3.99□□□□□ -1.77
CDC9YDL164C YIF1P53845 314 aaKnown RBP3.99□□□□□ -1.77
CDC9YDL164C UBX2Q04228 584 aa3.99□□□□□ -1.77
CDC9YDL164C LDS2Q08218 356 aa3.99□□□□□ -1.77
CDC9YDL164C ABP140Q08641 628 aaKnown RBP3.99□□□□□ -1.77
CDC9YDL164C SNF8Q12483 233 aa3.99□□□□□ -1.77
CDC9YDL164C YKL183C-AQ3E765 70 aa3.99□□□□□ -1.77
CDC9YDL164C CMC2Q3E7A4 109 aa3.99□□□□□ -1.77
CDC9YDL164C YDR157WA0A023PZE8 133 aa3.98□□□□□ -1.77
CDC9YDL164C RAD57P25301 460 aa3.98□□□□□ -1.77
CDC9YDL164C PPA2P28239 310 aa3.98□□□□□ -1.77
CDC9YDL164C PRO3P32263 286 aaKnown RBP3.98□□□□□ -1.77
CDC9YDL164C SKN1P33336 771 aa3.98□□□□□ -1.77
CDC9YDL164C YKL187CP34231 750 aa3.98□□□□□ -1.77
CDC9YDL164C HOC1P47124 396 aa3.98□□□□□ -1.77
CDC9YDL164C YGR168CP53293 376 aa3.98□□□□□ -1.77
CDC9YDL164C YPL014WQ02606 381 aa3.98□□□□□ -1.77
CDC9YDL164C MRP51Q02950 344 aa3.98□□□□□ -1.77
CDC9YDL164C IVY1Q04934 453 aa3.98□□□□□ -1.77
CDC9YDL164C YOR387CQ08910 206 aa3.98□□□□□ -1.77
CDC9YDL164C RUP1Q12242 671 aa3.98□□□□□ -1.77
CDC9YDL164C CYC7P00045 113 aa3.98□□□□□ -1.77
CDC9YDL164C MAS2P11914 482 aa3.98□□□□□ -1.77
CDC9YDL164C WHI2P12611 486 aa3.98□□□□□ -1.77
CDC9YDL164C EHD3P28817 500 aa3.98□□□□□ -1.77
CDC9YDL164C TSA1P34760 196 aaKnown RBP3.98□□□□□ -1.77
CDC9YDL164C YER121WP40076 114 aa3.98□□□□□ -1.77
CDC9YDL164C MKC7P53379 596 aa3.98□□□□□ -1.77
CDC9YDL164C SED5Q01590 340 aa3.98□□□□□ -1.77
CDC9YDL164C BNA7Q04066 261 aa3.98□□□□□ -1.77
CDC9YDL164C SEC13Q04491 297 aaKnown RBP3.98□□□□□ -1.77
CDC9YDL164C GMC2Q06201 188 aa3.98□□□□□ -1.77
CDC9YDL164C ASR1Q06834 288 aa3.98□□□□□ -1.77
CDC9YDL164C ALE1Q08548 619 aa3.98□□□□□ -1.77
CDC9YDL164C AHA1Q12449 350 aaKnown RBP3.98□□□□□ -1.77
CDC9YDL164C DET1Q99288 334 aaKnown RBP3.98□□□□□ -1.77
CDC9YDL164C RPP0P05317 312 aaKnown RBP3.97□□□□□ -1.77
CDC9YDL164C SPO12P17123 173 aa3.97□□□□□ -1.77
CDC9YDL164C KIN3P22209 435 aa3.97□□□□□ -1.77
CDC9YDL164C SPO23P33757 523 aa3.97□□□□□ -1.77
CDC9YDL164C YKL071WP36086 256 aa3.97□□□□□ -1.77
CDC9YDL164C IST2P38250 946 aa3.97□□□□□ -1.77
CDC9YDL164C FAU1P40099 211 aa3.97□□□□□ -1.77
CDC9YDL164C RFC4P40339 323 aaKnown RBP3.97□□□□□ -1.77
CDC9YDL164C LYS12P40495 371 aaKnown RBP3.97□□□□□ -1.77
CDC9YDL164C YPL034WQ03083 165 aa3.97□□□□□ -1.77
CDC9YDL164C SNA4Q07549 140 aa3.97□□□□□ -1.77
CDC9YDL164C FRE7Q12333 620 aa3.97□□□□□ -1.77
CDC9YDL164C ORT1Q12375 292 aa3.97□□□□□ -1.77
CDC9YDL164C ATP6P00854 259 aa3.97□□□□□ -1.77
CDC9YDL164C GAL4P04386 881 aa3.97□□□□□ -1.77
CDC9YDL164C REV1P12689 985 aa3.97□□□□□ -1.77
CDC9YDL164C SAT4P25333 603 aaKnown RBP3.97□□□□□ -1.77
CDC9YDL164C YCR006CP25350 157 aa3.97□□□□□ -1.77
CDC9YDL164C YKR073CP36153 106 aa3.97□□□□□ -1.77
CDC9YDL164C OPY1P38271 328 aa3.97□□□□□ -1.77
CDC9YDL164C SDS3P40505 327 aa3.97□□□□□ -1.77
CDC9YDL164C JHD2P47156 728 aaPredicted RBP3.97□□□□□ -1.77
CDC9YDL164C SNO2P53823 222 aa3.97□□□□□ -1.77
CDC9YDL164C OST6Q03723 332 aa3.97□□□□□ -1.77
CDC9YDL164C VBA1Q04301 562 aa3.97□□□□□ -1.77
CDC9YDL164C TMN2Q04562 672 aa3.97□□□□□ -1.77
CDC9YDL164C REX4Q08237 289 aa3.97□□□□□ -1.77
CDC9YDL164C ATG34Q12292 412 aa3.97□□□□□ -1.77
CDC9YDL164C GLE1Q12315 538 aa3.97□□□□□ -1.77
CDC9YDL164C NUP170P38181 1502 aa3.96□□□□□ -1.77
CDC9YDL164C QCR7P00128 127 aa3.96□□□□□ -1.78
CDC9YDL164C HEM2P05373 342 aa3.96□□□□□ -1.78
CDC9YDL164C DST1P07273 309 aa3.96□□□□□ -1.78
CDC9YDL164C ATP7P30902 174 aa3.96□□□□□ -1.78
CDC9YDL164C SKG6P32900 734 aaPredicted RBP3.96□□□□□ -1.78
CDC9YDL164C AGP3P43548 558 aa3.96□□□□□ -1.78
CDC9YDL164C RTT101P47050 842 aa3.96□□□□□ -1.78
CDC9YDL164C PHB2P50085 310 aa3.96□□□□□ -1.78
CDC9YDL164C SMM1P53720 384 aaKnown RBP3.96□□□□□ -1.78
CDC9YDL164C SMX3P54999 86 aaPredicted RBP3.96□□□□□ -1.78
CDC9YDL164C RHO4Q00246 291 aa3.96□□□□□ -1.78
CDC9YDL164C LGE1Q02796 332 aaKnown RBP3.96□□□□□ -1.78
CDC9YDL164C GGA1Q06336 557 aa3.96□□□□□ -1.78
CDC9YDL164C THI3Q07471 609 aa3.96□□□□□ -1.78
CDC9YDL164C GAT3Q07928 141 aa3.96□□□□□ -1.78
CDC9YDL164C BRX1Q08235 291 aaKnown RBP3.96□□□□□ -1.78
CDC9YDL164C DSE3Q08729 430 aa3.96□□□□□ -1.78
CDC9YDL164C SIA1Q12212 622 aa3.96□□□□□ -1.78
CDC9YDL164C YPR1Q12458 312 aa3.96□□□□□ -1.78
CDC9YDL164C PEP1P32319 1579 aa3.96□□□□□ -1.78
CDC9YDL164C RPP2AP05319 106 aaKnown RBP3.96□□□□□ -1.78
CDC9YDL164C NHP6BP11633 99 aaKnown RBP3.96□□□□□ -1.78
CDC9YDL164C CBF1P17106 351 aa3.96□□□□□ -1.78
CDC9YDL164C PMA2P19657 947 aa3.96□□□□□ -1.78
CDC9YDL164C BUB3P26449 341 aa3.96□□□□□ -1.78
CDC9YDL164C VMA6P32366 345 aaKnown RBP3.96□□□□□ -1.78
CDC9YDL164C TMT1P32643 299 aa3.96□□□□□ -1.78
CDC9YDL164C RCK2P38623 610 aa3.96□□□□□ -1.78
CDC9YDL164C YNL194CP40169 301 aa3.96□□□□□ -1.78
CDC9YDL164C NIF3P53081 288 aa3.96□□□□□ -1.78
CDC9YDL164C YVH1Q02256 364 aaKnown RBP3.96□□□□□ -1.78
CDC9YDL164C SEY1Q99287 776 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms