RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W GND2P53319 492 aa1.98□□□□□ -2.09
UBP1YDL122W ERG5P54781 538 aa1.98□□□□□ -2.09
UBP1YDL122W KAP120Q02932 1032 aa1.98□□□□□ -2.09
UBP1YDL122W GAS3Q03655 524 aa1.98□□□□□ -2.09
UBP1YDL122W DPB4Q04603 196 aaKnown RBP1.98□□□□□ -2.09
UBP1YDL122W CRN1Q06440 651 aa1.98□□□□□ -2.09
UBP1YDL122W YOL075CQ08234 1294 aa1.98□□□□□ -2.09
UBP1YDL122W RPN5Q12250 445 aaKnown RBP1.98□□□□□ -2.09
UBP1YDL122W LAS17Q12446 633 aa1.98□□□□□ -2.09
UBP1YDL122W SEY1Q99287 776 aa1.98□□□□□ -2.09
UBP1YDL122W ISN1Q99312 450 aa1.98□□□□□ -2.09
UBP1YDL122W MF(ALPHA)1P01149 165 aa1.98□□□□□ -2.09
UBP1YDL122W RPL3P14126 387 aaKnown RBP1.98□□□□□ -2.09
UBP1YDL122W SPO7P18410 259 aa1.98□□□□□ -2.09
UBP1YDL122W SLY1P22213 666 aa1.98□□□□□ -2.09
UBP1YDL122W CLB2P24869 491 aa1.98□□□□□ -2.09
UBP1YDL122W SPB1P25582 841 aaPredicted RBP1.98□□□□□ -2.09
UBP1YDL122W SEC1P30619 724 aaKnown RBP1.98□□□□□ -2.09
UBP1YDL122W YMC1P32331 307 aa1.98□□□□□ -2.09
UBP1YDL122W MRE11P32829 692 aa1.98□□□□□ -2.09
UBP1YDL122W HIS7P33734 552 aaKnown RBP1.98□□□□□ -2.09
UBP1YDL122W DAD2P36162 133 aa1.98□□□□□ -2.09
UBP1YDL122W FIG1P38224 298 aa1.98□□□□□ -2.09
UBP1YDL122W YHR097CP38809 366 aaKnown RBP1.98□□□□□ -2.09
UBP1YDL122W PCL7P40186 285 aa1.98□□□□□ -2.09
UBP1YDL122W ELO3P40319 345 aa1.98□□□□□ -2.09
UBP1YDL122W PHO23P50947 330 aa1.98□□□□□ -2.09
UBP1YDL122W YGR111WP53265 400 aa1.98□□□□□ -2.09
UBP1YDL122W CWC22P53333 577 aaKnown RBP1.98□□□□□ -2.09
UBP1YDL122W YNL247WP53852 767 aaKnown RBP1.98□□□□□ -2.09
UBP1YDL122W BOP3P53958 396 aa1.98□□□□□ -2.09
UBP1YDL122W HOT1Q03213 719 aa1.98□□□□□ -2.09
UBP1YDL122W PFA5Q03289 374 aa1.98□□□□□ -2.09
UBP1YDL122W RSM28Q03430 361 aa1.98□□□□□ -2.09
UBP1YDL122W SOV1Q04748 898 aa1.98□□□□□ -2.09
UBP1YDL122W ENB1Q08299 606 aa1.98□□□□□ -2.09
UBP1YDL122W YPL216WQ08964 1102 aa1.98□□□□□ -2.09
UBP1YDL122W APL4Q12028 832 aa1.98□□□□□ -2.09
UBP1YDL122W YKL033W-AQ86ZR7 236 aa1.98□□□□□ -2.09
UBP1YDL122W BRR1Q99177 341 aaPredicted RBP1.98□□□□□ -2.09
UBP1YDL122W RPC40P07703 335 aaKnown RBP1.97□□□□□ -2.09
UBP1YDL122W DAP2P18962 818 aa1.97□□□□□ -2.09
UBP1YDL122W APN1P22936 367 aa1.97□□□□□ -2.09
UBP1YDL122W YSP3P25036 478 aa1.97□□□□□ -2.09
UBP1YDL122W PTC6P25646 442 aa1.97□□□□□ -2.09
UBP1YDL122W BMH1P29311 267 aaKnown RBP1.97□□□□□ -2.09
UBP1YDL122W TPS2P31688 896 aaKnown RBP1.97□□□□□ -2.09
UBP1YDL122W CDC5P32562 705 aa1.97□□□□□ -2.09
UBP1YDL122W GYP6P32806 458 aa1.97□□□□□ -2.09
UBP1YDL122W LTV1P34078 463 aa1.97□□□□□ -2.09
UBP1YDL122W YKL187CP34231 750 aa1.97□□□□□ -2.09
UBP1YDL122W RPC37P36121 282 aa1.97□□□□□ -2.09
UBP1YDL122W HSM3P38348 480 aa1.97□□□□□ -2.09
UBP1YDL122W YHI9P38765 294 aa1.97□□□□□ -2.09
UBP1YDL122W RIX1P38883 763 aaPredicted RBP1.97□□□□□ -2.09
UBP1YDL122W ALG5P40350 334 aa1.97□□□□□ -2.09
UBP1YDL122W SNZ3P43545 298 aa1.97□□□□□ -2.09
UBP1YDL122W YDL186WP48568 277 aa1.97□□□□□ -2.09
UBP1YDL122W IMD4P50094 524 aaKnown RBP1.97□□□□□ -2.09
UBP1YDL122W DIA3P52290 468 aa1.97□□□□□ -2.09
UBP1YDL122W DCP2P53550 970 aaKnown RBP1.97□□□□□ -2.09
UBP1YDL122W SNZ2P53824 298 aa1.97□□□□□ -2.09
UBP1YDL122W CDC14Q00684 551 aa1.97□□□□□ -2.09
UBP1YDL122W RPM2Q02773 1202 aa1.97□□□□□ -2.09
UBP1YDL122W SWA2Q06677 668 aa1.97□□□□□ -2.09
UBP1YDL122W YDL086WQ07505 273 aa1.97□□□□□ -2.09
UBP1YDL122W YOL159CQ08300 171 aa1.97□□□□□ -2.09
UBP1YDL122W DCI1Q08558 271 aa1.97□□□□□ -2.09
UBP1YDL122W EMP46Q12396 444 aa1.97□□□□□ -2.09
UBP1YDL122W HEM4P06174 275 aa1.97□□□□□ -2.09
UBP1YDL122W TPK2P06245 380 aa1.97□□□□□ -2.09
UBP1YDL122W CBP6P07253 162 aaPredicted RBP1.97□□□□□ -2.09
UBP1YDL122W TRP4P07285 380 aaPredicted RBP1.97□□□□□ -2.09
UBP1YDL122W SEC66P33754 206 aa1.97□□□□□ -2.09
UBP1YDL122W HCS1P34243 683 aa1.97□□□□□ -2.09
UBP1YDL122W MNN2P38069 597 aa1.97□□□□□ -2.09
UBP1YDL122W RRT2P38332 387 aa1.97□□□□□ -2.09
UBP1YDL122W MUP3P38734 546 aa1.97□□□□□ -2.09
UBP1YDL122W YEL075CP39972 122 aa1.97□□□□□ -2.09
UBP1YDL122W YER189WP40104 122 aa1.97□□□□□ -2.09
UBP1YDL122W CCT7P42943 550 aaKnown RBP1.97□□□□□ -2.09
UBP1YDL122W SWP82P43554 623 aa1.97□□□□□ -2.09
UBP1YDL122W TOS3P43637 560 aa1.97□□□□□ -2.09
UBP1YDL122W PHO86P46956 311 aa1.97□□□□□ -2.09
UBP1YDL122W BUD17P53727 317 aa1.97□□□□□ -2.09
UBP1YDL122W GIS2P53849 153 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
UBP1YDL122W FIN1Q03898 291 aa1.97□□□□□ -2.09
UBP1YDL122W TGS1Q12052 315 aa1.97□□□□□ -2.09
UBP1YDL122W RLM1Q12224 676 aa1.97□□□□□ -2.09
UBP1YDL122W OCA6Q12454 224 aa1.97□□□□□ -2.09
UBP1YDL122W HXK2P04807 486 aaKnown RBP1.96□□□□□ -2.1
UBP1YDL122W RPL6BP05739 176 aaKnown RBP1.96□□□□□ -2.1
UBP1YDL122W SIR3P06701 978 aa1.96□□□□□ -2.1
UBP1YDL122W CNE1P27825 502 aa1.96□□□□□ -2.1
UBP1YDL122W MEI4P29467 408 aa1.96□□□□□ -2.1
UBP1YDL122W SSE2P32590 693 aaKnown RBP1.96□□□□□ -2.1
UBP1YDL122W YME2P32843 850 aa1.96□□□□□ -2.1
UBP1YDL122W PRP18P33411 251 aaPredicted RBP1.96□□□□□ -2.1
UBP1YDL122W NIP100P33420 868 aa1.96□□□□□ -2.1
UBP1YDL122W SOF1P33750 489 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms