RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	YOR387C	Q08910	206 aa		6.56	□□□□□ -1.36
UBP13	YBL067C	YBR121C-A	P0C5L4	52 aa		6.55	□□□□□ -1.36
UBP13	YBL067C	YMR085W	P0CF18	432 aa		6.55	□□□□□ -1.36
UBP13	YBL067C	KGD2	P19262	463 aa	Predicted RBP	6.55	□□□□□ -1.36
UBP13	YBL067C	NAM9	P27929	486 aa		6.55	□□□□□ -1.36
UBP13	YBL067C	VPS21	P36017	210 aa	Known RBP	6.55	□□□□□ -1.36
UBP13	YBL067C	YJR154W	P47181	346 aa		6.55	□□□□□ -1.36
UBP13	YBL067C	CTH1	P47976	325 aa		6.55	□□□□□ -1.36
UBP13	YBL067C	SED5	Q01590	340 aa		6.55	□□□□□ -1.36
UBP13	YBL067C	NRG1	Q03125	231 aa		6.55	□□□□□ -1.36
UBP13	YBL067C	SMP3	Q04174	516 aa		6.55	□□□□□ -1.36
UBP13	YBL067C	PEX12	Q04370	399 aa		6.55	□□□□□ -1.36
UBP13	YBL067C	NAT4	Q04751	285 aa		6.55	□□□□□ -1.36
UBP13	YBL067C	MUM3	Q08750	479 aa		6.55	□□□□□ -1.36
UBP13	YBL067C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	6.54	□□□□□ -1.36	not detected
UBP13	YBL067C	GAL10	P04397	699 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	ISY1	P21374	235 aa	Predicted RBP	6.54	□□□□□ -1.36
UBP13	YBL067C	DAL82	P21705	255 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	UBC8	P28263	218 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	MTR2	P34232	184 aa	Known RBP	6.54	□□□□□ -1.36
UBP13	YBL067C	PRE3	P38624	215 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	YFL040W	P43562	540 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	JHD2	P47156	728 aa	Predicted RBP	6.54	□□□□□ -1.36
UBP13	YBL067C	UBP8	P50102	471 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	YGR168C	P53293	376 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	YPL068C	Q02749	293 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	ALE1	Q08548	619 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	DDC1	Q08949	612 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	TMS1	Q12116	473 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	IMA3	P0CW40	589 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	IMA4	P0CW41	589 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	VPS1	P21576	704 aa	Known RBP	6.54	□□□□□ -1.36
UBP13	YBL067C	IES6	P32617	166 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	SSO1	P32867	290 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	PRS2	P38620	318 aa	Known RBP	6.54	□□□□□ -1.36
UBP13	YBL067C	ATG7	P38862	630 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	SYG1	P40528	902 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	SNL1	P40548	159 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	BAP3	P41815	604 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	SSN8	P47821	323 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	NAS6	P50086	228 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	GET1	P53192	235 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	YPR003C	P53394	754 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	ATG4	P53867	494 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	UBX2	Q04228	584 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	ADH6	Q04894	360 aa	Known RBP	6.54	□□□□□ -1.36
UBP13	YBL067C	IMA2	Q08295	589 aa		6.54	□□□□□ -1.36
UBP13	YBL067C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	6.54	□□□□□ -1.36	not detected
UBP13	YBL067C	SNA3	P14359	133 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	FLO10	P36170	1169 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	OPY1	P38271	328 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	GIM4	P40005	111 aa	Known RBP	6.53	□□□□□ -1.36
UBP13	YBL067C	BTT1	P40314	149 aa	Predicted RBP	6.53	□□□□□ -1.36
UBP13	YBL067C	QRI1	P43123	477 aa	Known RBP	6.53	□□□□□ -1.36
UBP13	YBL067C	YJR111C	P47148	283 aa	Known RBP	6.53	□□□□□ -1.36
UBP13	YBL067C	NUP53	Q03790	475 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	DLT1	Q04216	342 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	KRE28	Q04431	385 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	PET20	Q99373	253 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	NAM2	P11325	894 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	CHS2	P14180	963 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	RAD57	P25301	460 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	PUT3	P25502	979 aa	Predicted RBP	6.53	□□□□□ -1.36
UBP13	YBL067C	CLG1	P35190	452 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	TCM62	P38228	572 aa	Known RBP	6.53	□□□□□ -1.36
UBP13	YBL067C	ICS2	P38284	255 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	RPP1	P38786	293 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	YMR134W	P40207	237 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	LSB3	P43603	459 aa	Known RBP	6.53	□□□□□ -1.36
UBP13	YBL067C	TIS11	P47977	285 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	YDR461C-A	Q2V2P7	80 aa		6.53	□□□□□ -1.36
UBP13	YBL067C	RHO2	P06781	192 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	HPR1	P17629	752 aa	Known RBP	6.52	□□□□□ -1.37
UBP13	YBL067C	TOA2	P32774	122 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	CDC13	P32797	924 aa	Known RBP	6.52	□□□□□ -1.37
UBP13	YBL067C	SSH1	P38353	490 aa	Known RBP	6.52	□□□□□ -1.37
UBP13	YBL067C	PEX7	P39108	375 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	APS3	P47064	194 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	COX16	P47081	118 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	YJR149W	P47177	404 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	BUD17	P53727	317 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	ALG11	P53954	548 aa	Known RBP	6.52	□□□□□ -1.37
UBP13	YBL067C	MRPL51	Q06090	140 aa	Predicted RBP	6.52	□□□□□ -1.37
UBP13	YBL067C	SLF1	Q12034	447 aa	Known RBP	6.52	□□□□□ -1.37
UBP13	YBL067C	DAP1	Q12091	152 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	SIA1	Q12212	622 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	SEC3	P33332	1336 aa	Known RBP	6.52	□□□□□ -1.37
UBP13	YBL067C	ECM5	Q03214	1411 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	SRP102	P36057	244 aa	Predicted RBP	6.52	□□□□□ -1.37
UBP13	YBL067C	CIN4	P39110	191 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	PHO90	P39535	881 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	IRC24	P40580	263 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	YNR066C	P53752	436 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	YDL057W	Q07379	328 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	SHS1	Q07657	551 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	AI5_BETA	Q9ZZX0	354 aa		6.52	□□□□□ -1.37
UBP13	YBL067C	QCR2	P07257	368 aa		6.51	□□□□□ -1.37
UBP13	YBL067C	EHD3	P28817	500 aa		6.51	□□□□□ -1.37
UBP13	YBL067C	YKL187C	P34231	750 aa		6.51	□□□□□ -1.37
UBP13	YBL067C	ELF1	P36053	145 aa		6.51	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms