RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Gm6351K9J7D1 481 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Serpinb6bO08804 377 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Man1a2P39098 641 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Pcif1P59114 706 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Lrrc36Q3V0M2 755 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Dnajc11Q5U458 559 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Fastkd1Q6DI86 829 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Mrps7Q80X85 242 aaKnown RBP9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Krt222Q8CCX5 294 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 SdsQ8VBT2 327 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 4930550L24RikQ99PA7 320 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Syf2Q9D198 242 aaKnown RBP9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Moap1Q9ERH6 352 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Dab1P97318 588 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 SpdyaQ5IBH7 310 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 DpydQ8CHR6 1025 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Il1rapl2Q9ERS6 686 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Pin1Q9QUR7 165 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Tcp11x2A2AEI7 503 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Klc1O88447 541 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Vbp1P61759 196 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Uap1l1Q3TW96 507 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Tekt3Q6X6Z7 490 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Mei4Q8BRM6 389 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 E330017A01RikQ8BU47 192 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 DymQ8CHY3 669 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Olfr818Q8VG46 318 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Glipr1l2Q9CQ35 332 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Sertad1Q9JL10 236 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Zkscan7E9PVW1 718 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm7942L7N277 499 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Dpysl4O35098 572 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 PuraP42669 321 aaKnown RBP9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Stt3aP46978 705 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Tuba4aP68368 448 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Grxcr2Q3TYR5 254 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Dnajc1Q61712 552 aaKnown RBP9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Zbtb41Q811F1 908 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Rusc1Q8BG26 893 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Stac3Q8BZ71 360 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Syn3Q8JZP2 579 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Atp6v1c1Q9Z1G3 382 aa9.62□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Atp8b5A3FIN4 1183 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm1993A6X8I0 212 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ildr2B5TVM2 661 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Rgs7O54829 469 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 E2f6O54917 272 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Epb41l4aP52963 686 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm5935Q497S0 212 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm10488Q4KL05 212 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Klri2Q5DT36 248 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm14819Q62478 212 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 XpaQ64267 272 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Tbc1d30Q69ZT9 766 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 CapslQ6P8Y1 208 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm2163Q6PCY5 473 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 CntrobQ8CB62 887 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Trim31Q8R0K2 507 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Cacnb4Q8R0S4 519 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Klhl25Q8R2P1 589 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Atp2a1Q8R429 994 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Eif3mQ99JX4 374 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Cul4bA2A432 970 aaKnown RBP9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ccna2P51943 422 aaKnown RBP9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Cyp2c67Q569X9 491 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 CpQ61147 1061 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Q8K207 121 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Irf2bplQ8K3X4 775 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Rab11fip1Q9D620 645 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ddx21Q9JIK5 851 aaKnown RBP9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Rab33aP97950 237 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Olfr857Q7TRF7 309 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Olr1Q9EQ09 363 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ehd4Q9EQP2 541 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Rsc1a1Q9ER99 582 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Slc30a10Q3UVU3 470 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 GnptabQ69ZN6 1235 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ttc39bQ8BYY4 617 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Slc35f4Q8BZK4 485 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Stx5Q8K1E0 355 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Mrps5Q99N87 432 aaKnown RBP9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Dppa2Q9CWH0 301 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Mrpl19Q9D338 292 aaKnown RBP9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Igbp1bQ9QZ29 343 aa9.61□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Zfp213E9QAW0 468 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Bnc1O35914 961 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Syt1P46096 421 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Apoa1Q00623 264 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Pla2g4eQ50L42 875 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Srrm1Q52KI8 946 aaKnown RBP9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ppp1r14dQ7TT52 146 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Adcy2Q80TL1 1090 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Hspbap1Q8BK58 483 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Pitrm1Q8K411 1036 aaKnown RBP9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 PlgrktQ9D3P8 147 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Polr2dQ9D7M8 142 aaKnown RBP9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Erbb3Q61526 1339 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Sos1Q62245 1319 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f16A0A087WSN2 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f23A0A0R4J2B9 498 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms