Protein–RNA interactions for Protein: Q8K411

Pitrm1, Presequence protease, mitochondrial, mousemouse

Known RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pitrm1Q8K411 Gm25239-201ENSMUST00000174915 86 ntBASIC39.39■■■■□ 3.9
Pitrm1Q8K411 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
Pitrm1Q8K411 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Pitrm1Q8K411 Gm15042-201ENSMUST00000120212 883 ntBASIC34.46■■■■□ 3.11
Pitrm1Q8K411 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Pitrm1Q8K411 Gm24109-201ENSMUST00000175489 103 ntBASIC34.12■■■■□ 3.05
Pitrm1Q8K411 Gm15045-201ENSMUST00000117359 883 ntBASIC33.71■■■□□ 2.99
Pitrm1Q8K411 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Pitrm1Q8K411 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Pitrm1Q8K411 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.29■■■□□ 2.92
Pitrm1Q8K411 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
Pitrm1Q8K411 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Pitrm1Q8K411 Gm23366-201ENSMUST00000175022 89 ntBASIC32.9■■■□□ 2.86
Pitrm1Q8K411 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Pitrm1Q8K411 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Pitrm1Q8K411 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Pitrm1Q8K411 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.94■■■□□ 2.7
Pitrm1Q8K411 Psd-208ENSMUST00000224556 2034 ntBASIC31.86■■■□□ 2.69
Pitrm1Q8K411 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Pitrm1Q8K411 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.82■■■□□ 2.69
Pitrm1Q8K411 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.78■■■□□ 2.68
Pitrm1Q8K411 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Pitrm1Q8K411 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.59■■■□□ 2.65
Pitrm1Q8K411 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pitrm1Q8K411 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Pitrm1Q8K411 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Pitrm1Q8K411 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Pitrm1Q8K411 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.43■■■□□ 2.62
Pitrm1Q8K411 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pitrm1Q8K411 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Pitrm1Q8K411 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.29■■■□□ 2.6
Pitrm1Q8K411 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pitrm1Q8K411 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Pitrm1Q8K411 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Pitrm1Q8K411 Gm25238-201ENSMUST00000174914 89 ntBASIC31.08■■■□□ 2.57
Pitrm1Q8K411 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.06■■■□□ 2.56
Pitrm1Q8K411 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Pitrm1Q8K411 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Pitrm1Q8K411 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Pitrm1Q8K411 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.71■■■□□ 2.51
Pitrm1Q8K411 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Pitrm1Q8K411 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
Pitrm1Q8K411 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Pitrm1Q8K411 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Pitrm1Q8K411 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.36■■■□□ 2.45
Pitrm1Q8K411 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Pitrm1Q8K411 Gm27325-201ENSMUST00000175467 74 ntBASIC30.22■■■□□ 2.43
Pitrm1Q8K411 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Pitrm1Q8K411 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.15■■■□□ 2.42
Pitrm1Q8K411 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.15■■■□□ 2.42
Pitrm1Q8K411 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Pitrm1Q8K411 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Pitrm1Q8K411 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
Pitrm1Q8K411 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Pitrm1Q8K411 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Pitrm1Q8K411 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.98■■■□□ 2.39
Pitrm1Q8K411 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.91■■■□□ 2.38
Pitrm1Q8K411 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pitrm1Q8K411 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Pitrm1Q8K411 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.8■■■□□ 2.36
Pitrm1Q8K411 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Pitrm1Q8K411 Gm25262-201ENSMUST00000174934 133 ntBASIC29.75■■■□□ 2.35
Pitrm1Q8K411 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Pitrm1Q8K411 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Pitrm1Q8K411 Rab21-202ENSMUST00000218831 843 ntBASIC29.64■■■□□ 2.34
Pitrm1Q8K411 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Pitrm1Q8K411 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Pitrm1Q8K411 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.55■■■□□ 2.32
Pitrm1Q8K411 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.54■■■□□ 2.32
Pitrm1Q8K411 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Pitrm1Q8K411 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.53■■■□□ 2.32
Pitrm1Q8K411 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Pitrm1Q8K411 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Pitrm1Q8K411 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Pitrm1Q8K411 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
Pitrm1Q8K411 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Pitrm1Q8K411 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.36■■■□□ 2.29
Pitrm1Q8K411 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Pitrm1Q8K411 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Pitrm1Q8K411 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Pitrm1Q8K411 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.28■■■□□ 2.28
Pitrm1Q8K411 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.23■■■□□ 2.27
Pitrm1Q8K411 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Pitrm1Q8K411 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Pitrm1Q8K411 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
Pitrm1Q8K411 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Pitrm1Q8K411 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.14■■■□□ 2.26
Pitrm1Q8K411 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pitrm1Q8K411 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.1■■■□□ 2.25
Pitrm1Q8K411 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Pitrm1Q8K411 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Pitrm1Q8K411 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.01■■■□□ 2.23
Pitrm1Q8K411 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29■■■□□ 2.23
Pitrm1Q8K411 Gm26115-201ENSMUST00000175605 87 ntBASIC28.98■■■□□ 2.23
Pitrm1Q8K411 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Pitrm1Q8K411 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Pitrm1Q8K411 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Pitrm1Q8K411 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Pitrm1Q8K411 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Pitrm1Q8K411 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms