Protein–RNA interactions for Protein: Q8R0S4

Cacnb4, Voltage-dependent L-type calcium channel subunit beta-4, mousemouse

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb4Q8R0S4 Gm25239-201ENSMUST00000174915 86 ntBASIC31.19■■■□□ 2.58
Cacnb4Q8R0S4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Cacnb4Q8R0S4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Cacnb4Q8R0S4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
Cacnb4Q8R0S4 Psd-208ENSMUST00000224556 2034 ntBASIC28.82■■■□□ 2.2
Cacnb4Q8R0S4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Cacnb4Q8R0S4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cacnb4Q8R0S4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cacnb4Q8R0S4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Cacnb4Q8R0S4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Cacnb4Q8R0S4 Gm15042-201ENSMUST00000120212 883 ntBASIC27.91■■■□□ 2.06
Cacnb4Q8R0S4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Cacnb4Q8R0S4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Cacnb4Q8R0S4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Cacnb4Q8R0S4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Cacnb4Q8R0S4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Cacnb4Q8R0S4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.5■■□□□ 1.99
Cacnb4Q8R0S4 Gm15045-201ENSMUST00000117359 883 ntBASIC27.37■■□□□ 1.97
Cacnb4Q8R0S4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cacnb4Q8R0S4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cacnb4Q8R0S4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Cacnb4Q8R0S4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Cacnb4Q8R0S4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cacnb4Q8R0S4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cacnb4Q8R0S4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.72■■□□□ 1.87
Cacnb4Q8R0S4 Gm24109-201ENSMUST00000175489 103 ntBASIC26.7■■□□□ 1.86
Cacnb4Q8R0S4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cacnb4Q8R0S4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cacnb4Q8R0S4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cacnb4Q8R0S4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cacnb4Q8R0S4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Cacnb4Q8R0S4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.59■■□□□ 1.85
Cacnb4Q8R0S4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cacnb4Q8R0S4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cacnb4Q8R0S4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Cacnb4Q8R0S4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.39■■□□□ 1.82
Cacnb4Q8R0S4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cacnb4Q8R0S4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cacnb4Q8R0S4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cacnb4Q8R0S4 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.23■■□□□ 1.79
Cacnb4Q8R0S4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cacnb4Q8R0S4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.18■■□□□ 1.78
Cacnb4Q8R0S4 Gm23366-201ENSMUST00000175022 89 ntBASIC26.15■■□□□ 1.78
Cacnb4Q8R0S4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Cacnb4Q8R0S4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Cacnb4Q8R0S4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Cacnb4Q8R0S4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Cacnb4Q8R0S4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Cacnb4Q8R0S4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cacnb4Q8R0S4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.68■■□□□ 1.7
Cacnb4Q8R0S4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.67■■□□□ 1.7
Cacnb4Q8R0S4 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.66■■□□□ 1.7
Cacnb4Q8R0S4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cacnb4Q8R0S4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Cacnb4Q8R0S4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Cacnb4Q8R0S4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
Cacnb4Q8R0S4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cacnb4Q8R0S4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cacnb4Q8R0S4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Cacnb4Q8R0S4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cacnb4Q8R0S4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.43■■□□□ 1.66
Cacnb4Q8R0S4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cacnb4Q8R0S4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cacnb4Q8R0S4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cacnb4Q8R0S4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cacnb4Q8R0S4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cacnb4Q8R0S4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cacnb4Q8R0S4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cacnb4Q8R0S4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cacnb4Q8R0S4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cacnb4Q8R0S4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cacnb4Q8R0S4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
Cacnb4Q8R0S4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Cacnb4Q8R0S4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cacnb4Q8R0S4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
Cacnb4Q8R0S4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Cacnb4Q8R0S4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Cacnb4Q8R0S4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Cacnb4Q8R0S4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cacnb4Q8R0S4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Cacnb4Q8R0S4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Cacnb4Q8R0S4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Cacnb4Q8R0S4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Cacnb4Q8R0S4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
Cacnb4Q8R0S4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cacnb4Q8R0S4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.7■■□□□ 1.54
Cacnb4Q8R0S4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Cacnb4Q8R0S4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.68■■□□□ 1.54
Cacnb4Q8R0S4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cacnb4Q8R0S4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cacnb4Q8R0S4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cacnb4Q8R0S4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cacnb4Q8R0S4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
Cacnb4Q8R0S4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Cacnb4Q8R0S4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cacnb4Q8R0S4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cacnb4Q8R0S4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cacnb4Q8R0S4 Gm27325-201ENSMUST00000175467 74 ntBASIC24.56■■□□□ 1.52
Cacnb4Q8R0S4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cacnb4Q8R0S4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms