Protein–RNA interactions for Protein: Q9ER99

Rsc1a1, Regulatory solute carrier protein family 1 member 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsc1a1Q9ER99 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Rsc1a1Q9ER99 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
Rsc1a1Q9ER99 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Rsc1a1Q9ER99 Gm25239-201ENSMUST00000174915 86 ntBASIC32.76■■■□□ 2.83
Rsc1a1Q9ER99 Psd-208ENSMUST00000224556 2034 ntBASIC32.54■■■□□ 2.8
Rsc1a1Q9ER99 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Rsc1a1Q9ER99 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Rsc1a1Q9ER99 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Rsc1a1Q9ER99 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rsc1a1Q9ER99 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rsc1a1Q9ER99 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Rsc1a1Q9ER99 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Rsc1a1Q9ER99 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rsc1a1Q9ER99 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Rsc1a1Q9ER99 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Rsc1a1Q9ER99 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Rsc1a1Q9ER99 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Rsc1a1Q9ER99 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
Rsc1a1Q9ER99 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.18■■■□□ 2.42
Rsc1a1Q9ER99 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Rsc1a1Q9ER99 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rsc1a1Q9ER99 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
Rsc1a1Q9ER99 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Rsc1a1Q9ER99 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Rsc1a1Q9ER99 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rsc1a1Q9ER99 Gm15042-201ENSMUST00000120212 883 ntBASIC29.62■■■□□ 2.33
Rsc1a1Q9ER99 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rsc1a1Q9ER99 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.51■■■□□ 2.31
Rsc1a1Q9ER99 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Rsc1a1Q9ER99 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.29■■■□□ 2.28
Rsc1a1Q9ER99 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rsc1a1Q9ER99 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.28■■■□□ 2.28
Rsc1a1Q9ER99 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Rsc1a1Q9ER99 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Rsc1a1Q9ER99 Gm15045-201ENSMUST00000117359 883 ntBASIC29.23■■■□□ 2.27
Rsc1a1Q9ER99 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Rsc1a1Q9ER99 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.17■■■□□ 2.26
Rsc1a1Q9ER99 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.12■■■□□ 2.25
Rsc1a1Q9ER99 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Rsc1a1Q9ER99 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.04■■■□□ 2.24
Rsc1a1Q9ER99 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.03■■■□□ 2.24
Rsc1a1Q9ER99 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Rsc1a1Q9ER99 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Rsc1a1Q9ER99 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rsc1a1Q9ER99 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rsc1a1Q9ER99 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Rsc1a1Q9ER99 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rsc1a1Q9ER99 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Rsc1a1Q9ER99 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Rsc1a1Q9ER99 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
Rsc1a1Q9ER99 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.59■■■□□ 2.17
Rsc1a1Q9ER99 Gm24109-201ENSMUST00000175489 103 ntBASIC28.55■■■□□ 2.16
Rsc1a1Q9ER99 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rsc1a1Q9ER99 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rsc1a1Q9ER99 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Rsc1a1Q9ER99 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rsc1a1Q9ER99 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Rsc1a1Q9ER99 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rsc1a1Q9ER99 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rsc1a1Q9ER99 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rsc1a1Q9ER99 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rsc1a1Q9ER99 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rsc1a1Q9ER99 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.09
Rsc1a1Q9ER99 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Rsc1a1Q9ER99 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Rsc1a1Q9ER99 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rsc1a1Q9ER99 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Rsc1a1Q9ER99 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Rsc1a1Q9ER99 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.04■■■□□ 2.08
Rsc1a1Q9ER99 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Rsc1a1Q9ER99 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Rsc1a1Q9ER99 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Rsc1a1Q9ER99 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Rsc1a1Q9ER99 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Rsc1a1Q9ER99 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.72■■■□□ 2.03
Rsc1a1Q9ER99 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
Rsc1a1Q9ER99 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Rsc1a1Q9ER99 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rsc1a1Q9ER99 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Rsc1a1Q9ER99 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Rsc1a1Q9ER99 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
Rsc1a1Q9ER99 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Rsc1a1Q9ER99 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Rsc1a1Q9ER99 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
Rsc1a1Q9ER99 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rsc1a1Q9ER99 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Rsc1a1Q9ER99 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Rsc1a1Q9ER99 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rsc1a1Q9ER99 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.44■■□□□ 1.98
Rsc1a1Q9ER99 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rsc1a1Q9ER99 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rsc1a1Q9ER99 Gm23366-201ENSMUST00000175022 89 ntBASIC27.42■■□□□ 1.98
Rsc1a1Q9ER99 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
Rsc1a1Q9ER99 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rsc1a1Q9ER99 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rsc1a1Q9ER99 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Rsc1a1Q9ER99 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.33■■□□□ 1.97
Rsc1a1Q9ER99 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rsc1a1Q9ER99 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rsc1a1Q9ER99 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms