RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W AHA1Q12449 350 aaKnown RBP1.57□□□□□ -2.16
CTF4YPR135W MRPL23Q12487 163 aaPredicted RBP1.57□□□□□ -2.16
CTF4YPR135W TFB5Q3E7C1 72 aaPredicted RBP1.57□□□□□ -2.16
CTF4YPR135W VPS63O13549 108 aa1.56□□□□□ -2.16
CTF4YPR135W ARG80P07249 177 aa1.56□□□□□ -2.16
CTF4YPR135W PHO2P07269 559 aa1.56□□□□□ -2.16
CTF4YPR135W UNG1P12887 359 aa1.56□□□□□ -2.16
CTF4YPR135W SPS22P25380 463 aa1.56□□□□□ -2.16
CTF4YPR135W HES1P35843 434 aa1.56□□□□□ -2.16
CTF4YPR135W LHS1P36016 881 aa1.56□□□□□ -2.16
CTF4YPR135W TPO5P36029 618 aa1.56□□□□□ -2.16
CTF4YPR135W MRPL4P36517 319 aa1.56□□□□□ -2.16
CTF4YPR135W ASC1P38011 319 aaKnown RBP1.56□□□□□ -2.16
CTF4YPR135W PEX32P38292 413 aa1.56□□□□□ -2.16
CTF4YPR135W VHC1P38329 1120 aa1.56□□□□□ -2.16
CTF4YPR135W WSS1P38838 269 aa1.56□□□□□ -2.16
CTF4YPR135W LIN1P38852 340 aaPredicted RBP1.56□□□□□ -2.16
CTF4YPR135W SCC4P40090 624 aa1.56□□□□□ -2.16
CTF4YPR135W YJL107CP42947 387 aa1.56□□□□□ -2.16
CTF4YPR135W LOC1P43586 204 aaPredicted RBP1.56□□□□□ -2.16
CTF4YPR135W RPS10BP46784 105 aaKnown RBP1.56□□□□□ -2.16
CTF4YPR135W AIM22P47051 409 aa1.56□□□□□ -2.16
CTF4YPR135W YJL043WP47053 257 aa1.56□□□□□ -2.16
CTF4YPR135W YJR030CP47101 745 aa1.56□□□□□ -2.16
CTF4YPR135W PRP24P49960 444 aaKnown RBP1.56□□□□□ -2.16
CTF4YPR135W BIO3P50277 480 aa1.56□□□□□ -2.16
CTF4YPR135W EMC4P53073 190 aa1.56□□□□□ -2.16
CTF4YPR135W YGL185CP53100 379 aa1.56□□□□□ -2.16
CTF4YPR135W YGL117WP53133 265 aa1.56□□□□□ -2.16
CTF4YPR135W PNC1P53184 216 aaKnown RBP1.56□□□□□ -2.16
CTF4YPR135W DCP2P53550 970 aaKnown RBP1.56□□□□□ -2.16
CTF4YPR135W TRM112P53738 135 aaPredicted RBP1.56□□□□□ -2.16
CTF4YPR135W OCA2P53949 197 aa1.56□□□□□ -2.16
CTF4YPR135W ERG13P54839 491 aaKnown RBP1.56□□□□□ -2.16
CTF4YPR135W YDR541CQ03049 344 aa1.56□□□□□ -2.16
CTF4YPR135W RPN9Q04062 393 aaKnown RBP1.56□□□□□ -2.16
CTF4YPR135W BUD22Q04347 519 aaKnown RBP1.56□□□□□ -2.16
CTF4YPR135W MDM30Q05930 598 aa1.56□□□□□ -2.16
CTF4YPR135W CBP2P03874 630 aaPredicted RBP1.56□□□□□ -2.16
CTF4YPR135W GAL7P08431 366 aa1.56□□□□□ -2.16
CTF4YPR135W PET111P08468 800 aa1.56□□□□□ -2.16
CTF4YPR135W PUT4P15380 627 aa1.56□□□□□ -2.16
CTF4YPR135W FRS2P15625 503 aaKnown RBP1.56□□□□□ -2.16
CTF4YPR135W CLN1P20437 546 aa1.56□□□□□ -2.16
CTF4YPR135W SAG1P20840 650 aa1.56□□□□□ -2.16
CTF4YPR135W MRPL25P23369 157 aa1.56□□□□□ -2.16
CTF4YPR135W PSO2P30620 661 aa1.56□□□□□ -2.16
CTF4YPR135W YBR144CP34215 104 aa1.56□□□□□ -2.16
CTF4YPR135W HCS1P34243 683 aa1.56□□□□□ -2.16
CTF4YPR135W ZTA1P38230 334 aaKnown RBP1.56□□□□□ -2.16
CTF4YPR135W SMC2P38989 1170 aaKnown RBP1.56□□□□□ -2.16
CTF4YPR135W SAP1P39955 897 aaKnown RBP1.56□□□□□ -2.16
CTF4YPR135W BUR6P40096 142 aa1.56□□□□□ -2.16
CTF4YPR135W SEC9P40357 651 aa1.56□□□□□ -2.16
CTF4YPR135W RTT101P47050 842 aa1.56□□□□□ -2.16
CTF4YPR135W MPS2P53159 387 aa1.56□□□□□ -2.16
CTF4YPR135W DRN1P53255 507 aaKnown RBP1.56□□□□□ -2.16
CTF4YPR135W LSC1P53598 329 aaKnown RBP1.56□□□□□ -2.16
CTF4YPR135W RSM28Q03430 361 aa1.56□□□□□ -2.16
CTF4YPR135W RPS10AQ08745 105 aaPredicted RBP1.56□□□□□ -2.16
CTF4YPR135W NCE102Q12207 173 aaRIP-Chip data1.56□□□□□ -2.16not detected
CTF4YPR135W UBR1P19812 1950 aa1.55□□□□□ -2.16
CTF4YPR135W TDH1P00360 332 aaKnown RBP1.55□□□□□ -2.16
CTF4YPR135W MF(ALPHA)1P01149 165 aa1.55□□□□□ -2.16
CTF4YPR135W RPL6BP05739 176 aaKnown RBP1.55□□□□□ -2.16
CTF4YPR135W PRB1P09232 635 aa1.55□□□□□ -2.16
CTF4YPR135W CKA2P19454 339 aa1.55□□□□□ -2.16
CTF4YPR135W VMA16P23968 213 aa1.55□□□□□ -2.16
CTF4YPR135W CDC13P32797 924 aaKnown RBP1.55□□□□□ -2.16
CTF4YPR135W MRP4P32902 394 aa1.55□□□□□ -2.16
CTF4YPR135W SNU114P36048 1008 aaKnown RBP1.55□□□□□ -2.16
CTF4YPR135W DED81P38707 554 aaKnown RBP1.55□□□□□ -2.16
CTF4YPR135W SPT8P38915 602 aa1.55□□□□□ -2.16
CTF4YPR135W MNN9P39107 395 aaKnown RBP1.55□□□□□ -2.16
CTF4YPR135W VHS2P40463 436 aa1.55□□□□□ -2.16
CTF4YPR135W IAH1P41734 238 aa1.55□□□□□ -2.16
CTF4YPR135W COS5P47187 383 aa1.55□□□□□ -2.16
CTF4YPR135W HSH155P49955 971 aaKnown RBP1.55□□□□□ -2.16
CTF4YPR135W YNL144CP53907 740 aa1.55□□□□□ -2.16
CTF4YPR135W RPL6AQ02326 176 aaKnown RBP1.55□□□□□ -2.16
CTF4YPR135W STD1Q02794 444 aa1.55□□□□□ -2.16
CTF4YPR135W RRN11Q04712 507 aa1.55□□□□□ -2.16
CTF4YPR135W YLR413WQ06689 675 aa1.55□□□□□ -2.16
CTF4YPR135W COS7Q07788 383 aa1.55□□□□□ -2.16
CTF4YPR135W BAG7Q12128 409 aa1.55□□□□□ -2.16
CTF4YPR135W GIS3Q12418 502 aa1.55□□□□□ -2.16
CTF4YPR135W PFK27Q12471 397 aaPredicted RBP1.55□□□□□ -2.16
CTF4YPR135W CAR2P07991 424 aaKnown RBP1.55□□□□□ -2.16
CTF4YPR135W YKR104WP0CE69 306 aa1.55□□□□□ -2.16
CTF4YPR135W ART10P18634 518 aaKnown RBP1.55□□□□□ -2.16
CTF4YPR135W PRP2P20095 876 aaPredicted RBP1.55□□□□□ -2.16
CTF4YPR135W IMG1P25626 169 aa1.55□□□□□ -2.16
CTF4YPR135W NAM9P27929 486 aa1.55□□□□□ -2.16
CTF4YPR135W SPR1P32603 445 aa1.55□□□□□ -2.16
CTF4YPR135W GDA1P32621 518 aa1.55□□□□□ -2.16
CTF4YPR135W SOF1P33750 489 aaKnown RBP1.55□□□□□ -2.16
CTF4YPR135W DIA4P38705 446 aaPredicted RBP1.55□□□□□ -2.16
CTF4YPR135W MSR1P38714 643 aa1.55□□□□□ -2.16
CTF4YPR135W SSO2P39926 295 aa1.55□□□□□ -2.16
CTF4YPR135W ECM10P39987 644 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms