RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W ARE2P53629 642 aaKnown RBP5.53□□□□□ -1.52
RPN7YPR108W YNL181WP53878 407 aa5.53□□□□□ -1.52
RPN7YPR108W TDA7P53882 636 aaPredicted RBP5.53□□□□□ -1.52
RPN7YPR108W GIM3P53900 129 aa5.53□□□□□ -1.52
RPN7YPR108W RHO3Q00245 231 aaKnown RBP5.53□□□□□ -1.52
RPN7YPR108W NAM8Q00539 523 aaKnown RBP5.53□□□□□ -1.52
RPN7YPR108W NOG1Q02892 647 aaKnown RBP5.53□□□□□ -1.52
RPN7YPR108W ABZ2Q03266 374 aa5.53□□□□□ -1.52
RPN7YPR108W PLM2Q04383 521 aa5.53□□□□□ -1.52
RPN7YPR108W ERB1Q04660 807 aaKnown RBP5.53□□□□□ -1.52
RPN7YPR108W RGC1Q06108 1083 aaKnown RBP5.53□□□□□ -1.52
RPN7YPR108W ARO10Q06408 635 aa5.53□□□□□ -1.52
RPN7YPR108W GPN3Q06543 272 aa5.53□□□□□ -1.52
RPN7YPR108W YPR172WQ06608 200 aa5.53□□□□□ -1.52
RPN7YPR108W UPC2Q12151 913 aa5.53□□□□□ -1.52
RPN7YPR108W PCL9Q12477 304 aa5.53□□□□□ -1.52
RPN7YPR108W DCP1Q12517 231 aaPredicted RBP5.53□□□□□ -1.52
RPN7YPR108W TIM9O74700 87 aa5.52□□□□□ -1.53
RPN7YPR108W PHO5P00635 467 aa5.52□□□□□ -1.53
RPN7YPR108W FUR4P05316 633 aaKnown RBP5.52□□□□□ -1.53
RPN7YPR108W HIP1P06775 603 aa5.52□□□□□ -1.53
RPN7YPR108W PDE2P06776 526 aa5.52□□□□□ -1.53
RPN7YPR108W YOL163WP0CF20 169 aa5.52□□□□□ -1.53
RPN7YPR108W SEC12P11655 471 aa5.52□□□□□ -1.53
RPN7YPR108W KIN2P13186 1147 aaKnown RBP5.52□□□□□ -1.53
RPN7YPR108W HOM2P13663 365 aaKnown RBP5.52□□□□□ -1.53
RPN7YPR108W RPB5P20434 215 aa5.52□□□□□ -1.53
RPN7YPR108W MCK1P21965 375 aaKnown RBP5.52□□□□□ -1.53
RPN7YPR108W GIT1P25346 518 aa5.52□□□□□ -1.53
RPN7YPR108W RAD51P25454 400 aa5.52□□□□□ -1.53
RPN7YPR108W MGR1P25573 417 aa5.52□□□□□ -1.53
RPN7YPR108W KAP122P32767 1081 aa5.52□□□□□ -1.53
RPN7YPR108W SUR1P33300 382 aa5.52□□□□□ -1.53
RPN7YPR108W MAE1P36013 669 aaKnown RBP5.52□□□□□ -1.53
RPN7YPR108W CBP4P37267 147 aa5.52□□□□□ -1.53
RPN7YPR108W EXO84P38261 753 aa5.52□□□□□ -1.53
RPN7YPR108W EHT1P38295 451 aa5.52□□□□□ -1.53
RPN7YPR108W SBE22P38814 852 aa5.52□□□□□ -1.53
RPN7YPR108W YHR177WP38867 453 aa5.52□□□□□ -1.53
RPN7YPR108W AST2P39945 430 aaKnown RBP5.52□□□□□ -1.53
RPN7YPR108W FCY21P40039 528 aa5.52□□□□□ -1.53
RPN7YPR108W COG3P40094 801 aa5.52□□□□□ -1.53
RPN7YPR108W SSU1P41930 458 aa5.52□□□□□ -1.53
RPN7YPR108W GUS1P46655 708 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
RPN7YPR108W FAA4P47912 694 aaKnown RBP5.52□□□□□ -1.53
RPN7YPR108W RAD17P48581 401 aa5.52□□□□□ -1.53
RPN7YPR108W NUP57P48837 541 aa5.52□□□□□ -1.53
RPN7YPR108W IMD3P50095 523 aaKnown RBP5.52□□□□□ -1.53
RPN7YPR108W UBC9P50623 157 aaPredicted RBP5.52□□□□□ -1.53
RPN7YPR108W EXG2P52911 562 aa5.52□□□□□ -1.53
RPN7YPR108W NUP49Q02199 472 aa5.52□□□□□ -1.53
RPN7YPR108W MTQ2Q03920 221 aaPredicted RBP5.52□□□□□ -1.53
RPN7YPR108W TY1A-MR1Q04215 440 aa5.52□□□□□ -1.53
RPN7YPR108W IRC13Q08630 104 aa5.52□□□□□ -1.53
RPN7YPR108W RBD2Q12270 262 aa5.52□□□□□ -1.53
RPN7YPR108W PNO1Q99216 274 aaKnown RBP5.52□□□□□ -1.53
RPN7YPR108W Q0182Q9ZZW1 134 aa5.52□□□□□ -1.53
RPN7YPR108W CAP2P13517 287 aa5.51□□□□□ -1.53
RPN7YPR108W CDC34P14682 295 aa5.51□□□□□ -1.53
RPN7YPR108W MDH1P17505 334 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
RPN7YPR108W FUR1P18562 216 aaKnown RBP5.51□□□□□ -1.53
RPN7YPR108W HOP1P20050 605 aa5.51□□□□□ -1.53
RPN7YPR108W KGD1P20967 1014 aaKnown RBP5.51□□□□□ -1.53
RPN7YPR108W AHC2P25649 128 aa5.51□□□□□ -1.53
RPN7YPR108W ERG1P32476 496 aaKnown RBP5.51□□□□□ -1.53
RPN7YPR108W YOR062CP36025 268 aa5.51□□□□□ -1.53
RPN7YPR108W EMC3P36039 253 aa5.51□□□□□ -1.53
RPN7YPR108W BET3P36149 193 aa5.51□□□□□ -1.53
RPN7YPR108W HXT5P38695 592 aa5.51□□□□□ -1.53
RPN7YPR108W NAB3P38996 802 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
RPN7YPR108W ELO1P39540 310 aa5.51□□□□□ -1.53
RPN7YPR108W RRG9P40156 214 aa5.51□□□□□ -1.53
RPN7YPR108W SWM2P40342 146 aa5.51□□□□□ -1.53
RPN7YPR108W YIL166CP40445 542 aa5.51□□□□□ -1.53
RPN7YPR108W NEO1P40527 1151 aa5.51□□□□□ -1.53
RPN7YPR108W PRM10P42946 383 aa5.51□□□□□ -1.53
RPN7YPR108W PTR3P43606 678 aa5.51□□□□□ -1.53
RPN7YPR108W RPS0BP46654 252 aaKnown RBP5.51□□□□□ -1.53
RPN7YPR108W SSY5P47002 699 aa5.51□□□□□ -1.53
RPN7YPR108W BUD17P53727 317 aa5.51□□□□□ -1.53
RPN7YPR108W YNR061CP53747 219 aa5.51□□□□□ -1.53
RPN7YPR108W AQR1P53943 586 aa5.51□□□□□ -1.53
RPN7YPR108W SNZ1Q03148 297 aa5.51□□□□□ -1.53
RPN7YPR108W YMR315WQ04869 349 aaKnown RBP5.51□□□□□ -1.53
RPN7YPR108W PEX10Q05568 337 aa5.51□□□□□ -1.53
RPN7YPR108W LUC7Q07508 261 aaPredicted RBP5.51□□□□□ -1.53
RPN7YPR108W YLR040CQ07988 224 aa5.51□□□□□ -1.53
RPN7YPR108W YPL199CQ08954 240 aa5.51□□□□□ -1.53
RPN7YPR108W RKM1Q08961 583 aaPredicted RBP5.51□□□□□ -1.53
RPN7YPR108W SAM4Q08985 325 aaKnown RBP5.51□□□□□ -1.53
RPN7YPR108W YLR125WQ12138 136 aa5.51□□□□□ -1.53
RPN7YPR108W YPL066WQ12194 479 aa5.51□□□□□ -1.53
RPN7YPR108W PST2Q12335 198 aaKnown RBP5.51□□□□□ -1.53
RPN7YPR108W YKL018C-AQ3E7A7 99 aa5.51□□□□□ -1.53
RPN7YPR108W RPN13O13563 156 aa5.5□□□□□ -1.53
RPN7YPR108W RPS14AP06367 137 aaKnown RBP5.5□□□□□ -1.53
RPN7YPR108W ENA1P13587 1091 aa5.5□□□□□ -1.53
RPN7YPR108W SAM35P14693 329 aa5.5□□□□□ -1.53
RPN7YPR108W SNF6P18888 332 aa5.5□□□□□ -1.53
RPN7YPR108W HSP30P25619 332 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms