RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C BMT2P38278 337 aa1.19□□□□□ -2.22
NIP100YPL174C GEP4P38812 185 aa1.19□□□□□ -2.22
NIP100YPL174C ZIM17P42844 174 aa1.19□□□□□ -2.22
NIP100YPL174C CDC31P06704 161 aaKnown RBP1.19□□□□□ -2.22
NIP100YPL174C RPS19AP07280 144 aaKnown RBP1.19□□□□□ -2.22
NIP100YPL174C RPS19BP07281 144 aaPredicted RBP1.19□□□□□ -2.22
NIP100YPL174C ERV1P27882 189 aa1.19□□□□□ -2.22
NIP100YPL174C ZIP1P31111 875 aa1.19□□□□□ -2.22
NIP100YPL174C DEP1P31385 405 aa1.19□□□□□ -2.22
NIP100YPL174C HST1P53685 503 aa1.19□□□□□ -2.22
NIP100YPL174C REX2P54964 269 aaKnown RBP1.19□□□□□ -2.22
NIP100YPL174C RMT2Q03305 412 aa1.19□□□□□ -2.22
NIP100YPL174C TAF11Q04226 346 aa1.19□□□□□ -2.22
NIP100YPL174C MMR1Q06324 491 aa1.19□□□□□ -2.22
NIP100YPL174C YPS3Q12303 508 aa1.19□□□□□ -2.22
NIP100YPL174C STE7P06784 515 aa1.19□□□□□ -2.22
NIP100YPL174C CBP6P07253 162 aaPredicted RBP1.19□□□□□ -2.22
NIP100YPL174C PHA2P32452 334 aa1.19□□□□□ -2.22
NIP100YPL174C YEF1P32622 495 aa1.19□□□□□ -2.22
NIP100YPL174C FMT1P32785 401 aa1.19□□□□□ -2.22
NIP100YPL174C STP2P38704 541 aa1.19□□□□□ -2.22
NIP100YPL174C INM1P38710 295 aa1.19□□□□□ -2.22
NIP100YPL174C FAD1P38913 306 aa1.19□□□□□ -2.22
NIP100YPL174C YGR117CP53270 476 aa1.19□□□□□ -2.22
NIP100YPL174C BNI5P53890 448 aaKnown RBP1.19□□□□□ -2.22
NIP100YPL174C ENT5Q03769 411 aaKnown RBP1.19□□□□□ -2.22
NIP100YPL174C URH1Q04179 340 aa1.19□□□□□ -2.22
NIP100YPL174C FCY22Q12119 530 aa1.19□□□□□ -2.22
NIP100YPL174C ADE4P04046 510 aaKnown RBP1.18□□□□□ -2.22
NIP100YPL174C EPT1P22140 391 aa1.18□□□□□ -2.22
NIP100YPL174C CLB1P24868 471 aa1.18□□□□□ -2.22
NIP100YPL174C COS9P36034 407 aa1.18□□□□□ -2.22
NIP100YPL174C YBR241CP38142 488 aa1.18□□□□□ -2.22
NIP100YPL174C PFF1P38244 976 aa1.18□□□□□ -2.22
NIP100YPL174C ECM34P38728 170 aa1.18□□□□□ -2.22
NIP100YPL174C GAT2P40209 560 aa1.18□□□□□ -2.22
NIP100YPL174C SRB7P47822 140 aa1.18□□□□□ -2.22
NIP100YPL174C RNH201P53942 307 aa1.18□□□□□ -2.22
NIP100YPL174C SKI8Q02793 397 aaPredicted RBP1.18□□□□□ -2.22
NIP100YPL174C VPS72Q03388 795 aa1.18□□□□□ -2.22
NIP100YPL174C ERB1Q04660 807 aaKnown RBP1.18□□□□□ -2.22
NIP100YPL174C RUP1Q12242 671 aa1.18□□□□□ -2.22
NIP100YPL174C PUT4P15380 627 aa1.18□□□□□ -2.22
NIP100YPL174C PHO91P27514 894 aa1.18□□□□□ -2.22
NIP100YPL174C SKT5P34226 696 aa1.18□□□□□ -2.22
NIP100YPL174C KAP104P38217 918 aaKnown RBP1.18□□□□□ -2.22
NIP100YPL174C YHK8P38776 514 aa1.18□□□□□ -2.22
NIP100YPL174C BNS1P50084 137 aa1.18□□□□□ -2.22
NIP100YPL174C DCI1Q08558 271 aa1.18□□□□□ -2.22
NIP100YPL174C CHS6P40955 746 aa1.17□□□□□ -2.22
NIP100YPL174C FSH2Q05015 223 aa1.17□□□□□ -2.22
NIP100YPL174C SCM3Q12334 223 aa1.17□□□□□ -2.22
NIP100YPL174C ALG1P16661 449 aa1.17□□□□□ -2.22
NIP100YPL174C NFU1P32860 256 aa1.17□□□□□ -2.22
NIP100YPL174C ZTA1P38230 334 aaKnown RBP1.17□□□□□ -2.22
NIP100YPL174C GPI16P38875 610 aa1.17□□□□□ -2.22
NIP100YPL174C YIR035CP40579 254 aa1.17□□□□□ -2.22
NIP100YPL174C ROG1P53118 685 aa1.17□□□□□ -2.22
NIP100YPL174C RPL21AQ02753 160 aaKnown RBP1.17□□□□□ -2.22
NIP100YPL174C GYL1Q04322 720 aa1.17□□□□□ -2.22
NIP100YPL174C MFG1Q07684 458 aa1.17□□□□□ -2.22
NIP100YPL174C SRO7Q12038 1033 aa1.17□□□□□ -2.22
NIP100YPL174C YOP1Q12402 180 aa1.17□□□□□ -2.22
NIP100YPL174C YDL199CQ12407 687 aa1.17□□□□□ -2.22
NIP100YPL174C RPL21BQ12672 160 aaKnown RBP1.17□□□□□ -2.22
NIP100YPL174C MEX67Q99257 599 aaKnown RBP1.17□□□□□ -2.22
NIP100YPL174C ADH1P00330 348 aaKnown RBP1.16□□□□□ -2.22
NIP100YPL174C OPI3P05375 206 aa1.16□□□□□ -2.22
NIP100YPL174C ARF1P11076 181 aaKnown RBP1.16□□□□□ -2.22
NIP100YPL174C NRP1P32770 719 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
NIP100YPL174C WSS1P38838 269 aa1.16□□□□□ -2.22
NIP100YPL174C YGR111WP53265 400 aa1.16□□□□□ -2.22
NIP100YPL174C RPT4P53549 437 aaKnown RBP1.16□□□□□ -2.22
NIP100YPL174C ASA1Q06822 443 aa1.16□□□□□ -2.22
NIP100YPL174C MDH1P17505 334 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
NIP100YPL174C GIT1P25346 518 aa1.16□□□□□ -2.22
NIP100YPL174C VHS2P40463 436 aa1.16□□□□□ -2.22
NIP100YPL174C PFS2P42841 465 aaKnown RBP1.16□□□□□ -2.22
NIP100YPL174C ATP22P50273 684 aaPredicted RBP1.16□□□□□ -2.22
NIP100YPL174C LDB17Q12342 491 aa1.16□□□□□ -2.22
NIP100YPL174C PAB1P04147 577 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
NIP100YPL174C SSC1P0CS90 654 aaKnown RBP1.15□□□□□ -2.23
NIP100YPL174C ADK2P26364 225 aa1.15□□□□□ -2.23
NIP100YPL174C TIR2P33890 251 aa1.15□□□□□ -2.23
NIP100YPL174C HIT1P46973 164 aa1.15□□□□□ -2.23
NIP100YPL174C MRX8Q05473 314 aa1.15□□□□□ -2.23
NIP100YPL174C MSC3Q05812 728 aa1.15□□□□□ -2.23
NIP100YPL174C RAX2Q12465 1220 aa1.15□□□□□ -2.23
NIP100YPL174C CCH1P50077 2039 aa1.15□□□□□ -2.23
NIP100YPL174C PTI1P39927 425 aaPredicted RBP1.15□□□□□ -2.23
NIP100YPL174C YDL114WQ07530 308 aa1.15□□□□□ -2.23
NIP100YPL174C RPS18AP0CX55 146 aaKnown RBP1.14□□□□□ -2.23
NIP100YPL174C RPS18BP0CX56 146 aaPredicted RBP1.14□□□□□ -2.23
NIP100YPL174C PDX1P16451 410 aa1.14□□□□□ -2.23
NIP100YPL174C MNL1P38888 796 aa1.14□□□□□ -2.23
NIP100YPL174C YPS6P40583 537 aa1.14□□□□□ -2.23
NIP100YPL174C YJL055WP47044 245 aa1.14□□□□□ -2.23
NIP100YPL174C PRP42Q03776 544 aaKnown RBP1.14□□□□□ -2.23
NIP100YPL174C SXM1Q04175 944 aaKnown RBP1.14□□□□□ -2.23
NIP100YPL174C SNT309Q06091 175 aaPredicted RBP1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms