RNA–Protein interactions for RNA: YPL054W

LEE1, Transcript of Zinc-finger protein of unknown function, yeast

Gene LEE1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEE1	YPL054W	VEL1	P53058	206 aa		1.64	□□□□□ -2.15
LEE1	YPL054W	RTS3	P53289	263 aa		1.64	□□□□□ -2.15
LEE1	YPL054W	SNT309	Q06091	175 aa	Predicted RBP	1.64	□□□□□ -2.15
LEE1	YPL054W	DIS3	Q08162	1001 aa	Known RBP	1.64	□□□□□ -2.15
LEE1	YPL054W	POM152	P39685	1337 aa		1.64	□□□□□ -2.15
LEE1	YPL054W	ATP1	P07251	545 aa	Known RBP	1.63	□□□□□ -2.15
LEE1	YPL054W	PDC2	P32896	925 aa		1.63	□□□□□ -2.15
LEE1	YPL054W	ECM8	P38246	354 aa		1.63	□□□□□ -2.15
LEE1	YPL054W	TRR2	P38816	342 aa		1.63	□□□□□ -2.15
LEE1	YPL054W	STB1	P42845	420 aa		1.63	□□□□□ -2.15
LEE1	YPL054W	ZRG17	P53735	605 aa		1.63	□□□□□ -2.15
LEE1	YPL054W	SKO1	Q02100	647 aa		1.63	□□□□□ -2.15
LEE1	YPL054W	DDC1	Q08949	612 aa		1.63	□□□□□ -2.15
LEE1	YPL054W	BEM2	P39960	2167 aa	Known RBP	1.63	□□□□□ -2.15
LEE1	YPL054W	ADE4	P04046	510 aa	Known RBP	1.62	□□□□□ -2.15
LEE1	YPL054W	EPT1	P22140	391 aa		1.62	□□□□□ -2.15
LEE1	YPL054W	YDR115W	Q04598	105 aa		1.62	□□□□□ -2.15
LEE1	YPL054W	MRX8	Q05473	314 aa		1.62	□□□□□ -2.15
LEE1	YPL054W	HMS1	Q12398	434 aa		1.62	□□□□□ -2.15
LEE1	YPL054W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	1.61	□□□□□ -2.15	not detected
LEE1	YPL054W	CLB3	P24870	427 aa		1.61	□□□□□ -2.15
LEE1	YPL054W	SEH1	P53011	349 aa	Known RBP	1.61	□□□□□ -2.15
LEE1	YPL054W	SPR6	Q01684	191 aa		1.61	□□□□□ -2.15
LEE1	YPL054W	FAR10	Q06001	478 aa		1.61	□□□□□ -2.15
LEE1	YPL054W	PCL9	Q12477	304 aa		1.61	□□□□□ -2.15
LEE1	YPL054W	YOL085C	Q99345	113 aa		1.61	□□□□□ -2.15
LEE1	YPL054W	MET17	P06106	444 aa		1.6	□□□□□ -2.15
LEE1	YPL054W	CKA1	P15790	372 aa		1.6	□□□□□ -2.15
LEE1	YPL054W	ROX1	P25042	368 aa		1.6	□□□□□ -2.15
LEE1	YPL054W	SMP1	P38128	452 aa		1.6	□□□□□ -2.15
LEE1	YPL054W	YGP1	P38616	354 aa	Known RBP	1.6	□□□□□ -2.15
LEE1	YPL054W	YGR117C	P53270	476 aa		1.6	□□□□□ -2.15
LEE1	YPL054W	PRP38	Q00723	242 aa	Predicted RBP	1.6	□□□□□ -2.15
LEE1	YPL054W	KAP120	Q02932	1032 aa		1.6	□□□□□ -2.15
LEE1	YPL054W	MSC3	Q05812	728 aa		1.6	□□□□□ -2.15
LEE1	YPL054W	YHC1	Q05900	231 aa	Known RBP	1.6	□□□□□ -2.15
LEE1	YPL054W	YLR177W	Q06251	628 aa		1.6	□□□□□ -2.15
LEE1	YPL054W	SRO7	Q12038	1033 aa		1.6	□□□□□ -2.15
LEE1	YPL054W	SSC1	P0CS90	654 aa	Known RBP	1.59	□□□□□ -2.15
LEE1	YPL054W	ALG1	P16661	449 aa		1.59	□□□□□ -2.15
LEE1	YPL054W	FUS3	P16892	353 aa	Known RBP	1.59	□□□□□ -2.15
LEE1	YPL054W	UTR5	P32630	166 aa		1.59	□□□□□ -2.15
LEE1	YPL054W	TOA1	P32773	286 aa		1.59	□□□□□ -2.15
LEE1	YPL054W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	1.59	□□□□□ -2.15	not detected
LEE1	YPL054W	SRB2	P34162	210 aa		1.59	□□□□□ -2.15
LEE1	YPL054W	TRM112	P53738	135 aa	Predicted RBP	1.59	□□□□□ -2.15
LEE1	YPL054W	REX2	P54964	269 aa	Known RBP	1.59	□□□□□ -2.15
LEE1	YPL054W	INP2	Q03824	705 aa		1.59	□□□□□ -2.15
LEE1	YPL054W	MCT1	Q12283	360 aa		1.59	□□□□□ -2.15
LEE1	YPL054W	AUS1	Q08409	1394 aa		1.59	□□□□□ -2.16
LEE1	YPL054W	RPS18A	P0CX55	146 aa	Known RBP	1.58	□□□□□ -2.16
LEE1	YPL054W	RPS18B	P0CX56	146 aa	Predicted RBP	1.58	□□□□□ -2.16
LEE1	YPL054W	SAS3	P34218	831 aa		1.58	□□□□□ -2.16
LEE1	YPL054W	FRM2	P37261	193 aa		1.58	□□□□□ -2.16
LEE1	YPL054W	YER079W	P40052	210 aa	Known RBP	1.58	□□□□□ -2.16
LEE1	YPL054W	MMF1	P40185	145 aa	Known RBP	1.58	□□□□□ -2.16
LEE1	YPL054W	TRF5	P48561	642 aa	Known RBP	1.58	□□□□□ -2.16
LEE1	YPL054W	YMR130W	Q04223	302 aa		1.58	□□□□□ -2.16
LEE1	YPL054W	DCS1	Q06151	350 aa		1.58	□□□□□ -2.16
LEE1	YPL054W	ECM7	Q06200	448 aa		1.58	□□□□□ -2.16
LEE1	YPL054W	SFM1	Q12314	213 aa		1.58	□□□□□ -2.16
LEE1	YPL054W	DST1	P07273	309 aa		1.57	□□□□□ -2.16
LEE1	YPL054W	MRP7	P12687	371 aa		1.57	□□□□□ -2.16
LEE1	YPL054W	CKA2	P19454	339 aa		1.57	□□□□□ -2.16
LEE1	YPL054W	URA4	P20051	364 aa		1.57	□□□□□ -2.16
LEE1	YPL054W	BRF1	P29056	596 aa		1.57	□□□□□ -2.16
LEE1	YPL054W	SPO23	P33757	523 aa		1.57	□□□□□ -2.16
LEE1	YPL054W	SKT5	P34226	696 aa		1.57	□□□□□ -2.16
LEE1	YPL054W	YIL059C	P40520	121 aa		1.57	□□□□□ -2.16
LEE1	YPL054W	COS4	P43542	379 aa		1.57	□□□□□ -2.16
LEE1	YPL054W	VAC7	P53950	1165 aa		1.57	□□□□□ -2.16
LEE1	YPL054W	YMR010W	Q03687	405 aa		1.57	□□□□□ -2.16
LEE1	YPL054W	RPN9	Q04062	393 aa	Known RBP	1.57	□□□□□ -2.16
LEE1	YPL054W	DON1	Q05610	365 aa		1.57	□□□□□ -2.16
LEE1	YPL054W	MED2	Q12124	431 aa		1.57	□□□□□ -2.16
LEE1	YPL054W	RUP1	Q12242	671 aa		1.57	□□□□□ -2.16
LEE1	YPL054W	HIF1	Q12373	385 aa		1.57	□□□□□ -2.16
LEE1	YPL054W	SCH9	P11792	824 aa	Known RBP	1.56	□□□□□ -2.16
LEE1	YPL054W	SPS19	P32573	292 aa	Known RBP	1.56	□□□□□ -2.16
LEE1	YPL054W	RRT13	P40042	185 aa		1.56	□□□□□ -2.16
LEE1	YPL054W	KEG1	P43614	200 aa		1.56	□□□□□ -2.16
LEE1	YPL054W	IRC6	P43615	237 aa		1.56	□□□□□ -2.16
LEE1	YPL054W	RNH201	P53942	307 aa		1.56	□□□□□ -2.16
LEE1	YPL054W	OCA2	P53949	197 aa		1.56	□□□□□ -2.16
LEE1	YPL054W	RTN2	Q12443	393 aa		1.56	□□□□□ -2.16
LEE1	YPL054W	MSP1	P28737	362 aa		1.55	□□□□□ -2.16
LEE1	YPL054W	LDS1	P31379	325 aa		1.55	□□□□□ -2.16
LEE1	YPL054W	MCR1	P36060	302 aa	Known RBP	1.55	□□□□□ -2.16
LEE1	YPL054W	YBR241C	P38142	488 aa		1.55	□□□□□ -2.16
LEE1	YPL054W	GPX2	P38143	162 aa		1.55	□□□□□ -2.16
LEE1	YPL054W	SHE3	P38272	425 aa	Known RBP	1.55	□□□□□ -2.16
LEE1	YPL054W	GPI16	P38875	610 aa		1.55	□□□□□ -2.16
LEE1	YPL054W	VTI1	Q04338	217 aa		1.55	□□□□□ -2.16
LEE1	YPL054W	MED1	Q12321	566 aa		1.55	□□□□□ -2.16
LEE1	YPL054W	YOL159C-A	Q3E769	90 aa		1.55	□□□□□ -2.16
LEE1	YPL054W	MEX67	Q99257	599 aa	Known RBP	1.55	□□□□□ -2.16
LEE1	YPL054W	YOR338W	Q99326	363 aa		1.55	□□□□□ -2.16
LEE1	YPL054W	COX3	P00420	269 aa		1.54	□□□□□ -2.16
LEE1	YPL054W	REC107	P21651	314 aa		1.54	□□□□□ -2.16
LEE1	YPL054W	SKG6	P32900	734 aa	Predicted RBP	1.54	□□□□□ -2.16

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms