RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W YIR035CP40579 254 aa0.89□□□□□ -2.27
SGF11YPL047W COQ5P49017 307 aa0.89□□□□□ -2.27
SGF11YPL047W SEH1P53011 349 aaKnown RBP0.89□□□□□ -2.27
SGF11YPL047W YGR117CP53270 476 aa0.89□□□□□ -2.27
SGF11YPL047W HST4P53688 370 aa0.89□□□□□ -2.27
SGF11YPL047W PRP3Q03338 469 aaPredicted RBP0.89□□□□□ -2.27
SGF11YPL047W VTI1Q04338 217 aa0.89□□□□□ -2.27
SGF11YPL047W FCY22Q12119 530 aa0.89□□□□□ -2.27
SGF11YPL047W MCT1Q12283 360 aa0.89□□□□□ -2.27
SGF11YPL047W SFM1Q12314 213 aa0.89□□□□□ -2.27
SGF11YPL047W YDL199CQ12407 687 aa0.89□□□□□ -2.27
SGF11YPL047W RTN2Q12443 393 aa0.89□□□□□ -2.27
SGF11YPL047W HTZ1Q12692 134 aaKnown RBP0.89□□□□□ -2.27
SGF11YPL047W PGA3Q12746 312 aaKnown RBP0.89□□□□□ -2.27
SGF11YPL047W YOL159C-AQ3E769 90 aa0.89□□□□□ -2.27
SGF11YPL047W YCR024C-BQ3E7Z8 88 aa0.89□□□□□ -2.27
SGF11YPL047W POM152P39685 1337 aa0.89□□□□□ -2.27
SGF11YPL047W MET17P06106 444 aa0.88□□□□□ -2.27
SGF11YPL047W SSC1P0CS90 654 aaKnown RBP0.88□□□□□ -2.27
SGF11YPL047W ALG1P16661 449 aa0.88□□□□□ -2.27
SGF11YPL047W MSP1P28737 362 aa0.88□□□□□ -2.27
SGF11YPL047W NFU1P32860 256 aa0.88□□□□□ -2.27
SGF11YPL047W SKN1P33336 771 aa0.88□□□□□ -2.27
SGF11YPL047W SKT5P34226 696 aa0.88□□□□□ -2.27
SGF11YPL047W FRM2P37261 193 aa0.88□□□□□ -2.27
SGF11YPL047W SOL2P37262 315 aa0.88□□□□□ -2.27
SGF11YPL047W NOC2P39744 710 aaKnown RBP0.88□□□□□ -2.27
SGF11YPL047W ASN2P49090 572 aaKnown RBP0.88□□□□□ -2.27
SGF11YPL047W ZRG17P53735 605 aa0.88□□□□□ -2.27
SGF11YPL047W ENT5Q03769 411 aaKnown RBP0.88□□□□□ -2.27
SGF11YPL047W DIS3Q08162 1001 aaKnown RBP0.88□□□□□ -2.27
SGF11YPL047W HRT1Q08273 121 aa0.88□□□□□ -2.27
SGF11YPL047W TIR4Q12218 487 aaPredicted RBP0.88□□□□□ -2.27
SGF11YPL047W LDB17Q12342 491 aa0.88□□□□□ -2.27
SGF11YPL047W SFI1Q12369 946 aa0.88□□□□□ -2.27
SGF11YPL047W ISN1Q99312 450 aa0.88□□□□□ -2.27
SGF11YPL047W ATP1P07251 545 aaKnown RBP0.87□□□□□ -2.27
SGF11YPL047W URA4P20051 364 aa0.87□□□□□ -2.27
SGF11YPL047W CMK2P22517 447 aa0.87□□□□□ -2.27
SGF11YPL047W CLB1P24868 471 aa0.87□□□□□ -2.27
SGF11YPL047W BRF1P29056 596 aa0.87□□□□□ -2.27
SGF11YPL047W TOA1P32773 286 aa0.87□□□□□ -2.27
SGF11YPL047W SPO23P33757 523 aa0.87□□□□□ -2.27
SGF11YPL047W SRB2P34162 210 aa0.87□□□□□ -2.27
SGF11YPL047W SAS3P34218 831 aa0.87□□□□□ -2.27
SGF11YPL047W MCR1P36060 302 aaKnown RBP0.87□□□□□ -2.27
SGF11YPL047W OLA1P38219 394 aaKnown RBP0.87□□□□□ -2.27
SGF11YPL047W ECM34P38728 170 aa0.87□□□□□ -2.27
SGF11YPL047W TRR2P38816 342 aa0.87□□□□□ -2.27
SGF11YPL047W FHL1P39521 936 aa0.87□□□□□ -2.27
SGF11YPL047W COS4P43542 379 aa0.87□□□□□ -2.27
SGF11YPL047W YJL144WP47009 104 aa0.87□□□□□ -2.27
SGF11YPL047W STE24P47154 453 aa0.87□□□□□ -2.27
SGF11YPL047W VAC7P53950 1165 aa0.87□□□□□ -2.27
SGF11YPL047W PRP38Q00723 242 aaPredicted RBP0.87□□□□□ -2.27
SGF11YPL047W ACL4Q03771 387 aa0.87□□□□□ -2.27
SGF11YPL047W ARX1Q03862 593 aaKnown RBP0.87□□□□□ -2.27
SGF11YPL047W YMR130WQ04223 302 aa0.87□□□□□ -2.27
SGF11YPL047W TAF11Q04226 346 aa0.87□□□□□ -2.27
SGF11YPL047W YHC1Q05900 231 aaKnown RBP0.87□□□□□ -2.27
SGF11YPL047W DCS1Q06151 350 aa0.87□□□□□ -2.27
SGF11YPL047W PCL9Q12477 304 aa0.87□□□□□ -2.27
SGF11YPL047W MEX67Q99257 599 aaKnown RBP0.87□□□□□ -2.27
SGF11YPL047W RPS18AP0CX55 146 aaKnown RBP0.86□□□□□ -2.27
SGF11YPL047W RPS18BP0CX56 146 aaPredicted RBP0.86□□□□□ -2.27
SGF11YPL047W ASP3-2P0CX77 362 aa0.86□□□□□ -2.27
SGF11YPL047W ASP3-3P0CX78 362 aa0.86□□□□□ -2.27
SGF11YPL047W ASP3-4P0CX79 362 aa0.86□□□□□ -2.27
SGF11YPL047W ASP3-1P0CZ17 362 aa0.86□□□□□ -2.27
SGF11YPL047W SRV2P17555 526 aaKnown RBP0.86□□□□□ -2.27
SGF11YPL047W CKA2P19454 339 aa0.86□□□□□ -2.27
SGF11YPL047W REC107P21651 314 aa0.86□□□□□ -2.27
SGF11YPL047W YCR051WP25631 222 aa0.86□□□□□ -2.27
SGF11YPL047W LDS1P31379 325 aa0.86□□□□□ -2.27
SGF11YPL047W HSP104P31539 908 aaKnown RBP0.86□□□□□ -2.27
SGF11YPL047W TOA2P32774 122 aa0.86□□□□□ -2.27
SGF11YPL047W CBF5P33322 483 aaKnown RBP RIP-Chip data0.86□□□□□ -2.27not detected
SGF11YPL047W ASC1P38011 319 aaKnown RBP0.86□□□□□ -2.27
SGF11YPL047W SMP1P38128 452 aa0.86□□□□□ -2.27
SGF11YPL047W GPX2P38143 162 aa0.86□□□□□ -2.27
SGF11YPL047W STN1P38960 494 aa0.86□□□□□ -2.27
SGF11YPL047W VHS2P40463 436 aa0.86□□□□□ -2.27
SGF11YPL047W RRP46P53256 223 aaPredicted RBP0.86□□□□□ -2.27
SGF11YPL047W RRN9P53437 365 aa0.86□□□□□ -2.27
SGF11YPL047W MRPL19P53875 158 aa0.86□□□□□ -2.27
SGF11YPL047W REX2P54964 269 aaKnown RBP0.86□□□□□ -2.27
SGF11YPL047W SPR6Q01684 191 aa0.86□□□□□ -2.27
SGF11YPL047W YDR341CQ05506 607 aaKnown RBP0.86□□□□□ -2.27
SGF11YPL047W MSC3Q05812 728 aa0.86□□□□□ -2.27
SGF11YPL047W YLR177WQ06251 628 aa0.86□□□□□ -2.27
SGF11YPL047W NSE1Q07913 336 aa0.86□□□□□ -2.27
SGF11YPL047W DDC1Q08949 612 aa0.86□□□□□ -2.27
SGF11YPL047W HMS1Q12398 434 aa0.86□□□□□ -2.27
SGF11YPL047W MTR10Q99189 972 aa0.86□□□□□ -2.27
SGF11YPL047W DST1P07273 309 aa0.85□□□□□ -2.27
SGF11YPL047W RED1P14291 827 aa0.85□□□□□ -2.27
SGF11YPL047W FUS3P16892 353 aaKnown RBP0.85□□□□□ -2.27
SGF11YPL047W CHA1P25379 360 aaKnown RBP0.85□□□□□ -2.27
SGF11YPL047W ZIP1P31111 875 aa0.85□□□□□ -2.27
SGF11YPL047W RAD23P32628 398 aaKnown RBP0.85□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms