RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C STE7P06784 515 aa1.88□□□□□ -2.11
SWT1YOR166C SEC63P14906 663 aa1.88□□□□□ -2.11
SWT1YOR166C COS9P36034 407 aa1.88□□□□□ -2.11
SWT1YOR166C GPI18P38211 433 aa1.88□□□□□ -2.11
SWT1YOR166C MSG5P38590 489 aa1.88□□□□□ -2.11
SWT1YOR166C GEP4P38812 185 aa1.88□□□□□ -2.11
SWT1YOR166C YHR182WP38870 785 aa1.88□□□□□ -2.11
SWT1YOR166C MNL1P38888 796 aa1.88□□□□□ -2.11
SWT1YOR166C LCB2P40970 561 aa1.88□□□□□ -2.11
SWT1YOR166C TCB2P48231 1178 aa1.88□□□□□ -2.11
SWT1YOR166C ASN2P49090 572 aaKnown RBP1.88□□□□□ -2.11
SWT1YOR166C VHS1Q03785 461 aa1.88□□□□□ -2.11
SWT1YOR166C SMF3Q12078 473 aaPredicted RBP1.88□□□□□ -2.11
SWT1YOR166C RBD2Q12270 262 aa1.88□□□□□ -2.11
SWT1YOR166C FAB1P34756 2278 aa1.88□□□□□ -2.11
SWT1YOR166C ILV5P06168 395 aaKnown RBP1.87□□□□□ -2.11
SWT1YOR166C IMA3P0CW40 589 aa1.87□□□□□ -2.11
SWT1YOR166C IMA4P0CW41 589 aa1.87□□□□□ -2.11
SWT1YOR166C CAP2P13517 287 aa1.87□□□□□ -2.11
SWT1YOR166C EXG1P23776 448 aaKnown RBP1.87□□□□□ -2.11
SWT1YOR166C NUP2P32499 720 aa1.87□□□□□ -2.11
SWT1YOR166C SOL2P37262 315 aa1.87□□□□□ -2.11
SWT1YOR166C OXA1P39952 402 aa1.87□□□□□ -2.11
SWT1YOR166C SEC9P40357 651 aa1.87□□□□□ -2.11
SWT1YOR166C UTP18P40362 594 aaPredicted RBP1.87□□□□□ -2.11
SWT1YOR166C TRF5P48561 642 aaKnown RBP1.87□□□□□ -2.11
SWT1YOR166C MST27P53176 234 aa1.87□□□□□ -2.11
SWT1YOR166C MTM1P53320 366 aa1.87□□□□□ -2.11
SWT1YOR166C ECM11Q04110 302 aa1.87□□□□□ -2.11
SWT1YOR166C YLR456WQ06199 204 aa1.87□□□□□ -2.11
SWT1YOR166C LDS2Q08218 356 aa1.87□□□□□ -2.11
SWT1YOR166C IMA2Q08295 589 aa1.87□□□□□ -2.11
SWT1YOR166C RPN5Q12250 445 aaKnown RBP1.87□□□□□ -2.11
SWT1YOR166C APC2Q12440 853 aa1.87□□□□□ -2.11
SWT1YOR166C PAR32Q12515 295 aaKnown RBP1.87□□□□□ -2.11
SWT1YOR166C NAG1Q8TGN9 163 aa1.87□□□□□ -2.11
SWT1YOR166C ADH2P00331 348 aaKnown RBP1.86□□□□□ -2.11
SWT1YOR166C CDC50P25656 391 aa1.86□□□□□ -2.11
SWT1YOR166C RPL16AP26784 199 aaKnown RBP1.86□□□□□ -2.11
SWT1YOR166C ITR1P30605 584 aa1.86□□□□□ -2.11
SWT1YOR166C DEP1P31385 405 aa1.86□□□□□ -2.11
SWT1YOR166C CSE2P33308 149 aa1.86□□□□□ -2.11
SWT1YOR166C MCR1P36060 302 aaKnown RBP1.86□□□□□ -2.11
SWT1YOR166C BMT2P38278 337 aa1.86□□□□□ -2.11
SWT1YOR166C WSC4P38739 605 aa1.86□□□□□ -2.11
SWT1YOR166C PEX22P39718 180 aa1.86□□□□□ -2.11
SWT1YOR166C SEC28P40509 296 aaKnown RBP1.86□□□□□ -2.11
SWT1YOR166C YPS6P40583 537 aa1.86□□□□□ -2.11
SWT1YOR166C RSC1P53236 928 aa1.86□□□□□ -2.11
SWT1YOR166C RTT102P53330 157 aa1.86□□□□□ -2.11
SWT1YOR166C TSA2Q04120 196 aa1.86□□□□□ -2.11
SWT1YOR166C YDR341CQ05506 607 aaKnown RBP1.86□□□□□ -2.11
SWT1YOR166C MRPL35Q06678 367 aa1.86□□□□□ -2.11
SWT1YOR166C YPR091CQ06833 770 aa1.86□□□□□ -2.11
SWT1YOR166C FCY22Q12119 530 aa1.86□□□□□ -2.11
SWT1YOR166C TFB5Q3E7C1 72 aaPredicted RBP1.86□□□□□ -2.11
SWT1YOR166C HSP82P02829 709 aaKnown RBP1.85□□□□□ -2.11
SWT1YOR166C PAB1P04147 577 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
SWT1YOR166C PCL1P24867 279 aa1.85□□□□□ -2.11
SWT1YOR166C LDS1P31379 325 aa1.85□□□□□ -2.11
SWT1YOR166C YSC83P32792 385 aa1.85□□□□□ -2.11
SWT1YOR166C BLI1P35727 113 aa1.85□□□□□ -2.11
SWT1YOR166C MRPS9P38120 278 aa1.85□□□□□ -2.11
SWT1YOR166C QDR3P38227 689 aa1.85□□□□□ -2.11
SWT1YOR166C PFF1P38244 976 aa1.85□□□□□ -2.11
SWT1YOR166C SBE22P38814 852 aa1.85□□□□□ -2.11
SWT1YOR166C STN1P38960 494 aa1.85□□□□□ -2.11
SWT1YOR166C SEC27P41811 889 aaKnown RBP1.85□□□□□ -2.11
SWT1YOR166C HIT1P46973 164 aa1.85□□□□□ -2.11
SWT1YOR166C CRH1P53301 507 aa1.85□□□□□ -2.11
SWT1YOR166C RNY1Q02933 434 aaKnown RBP1.85□□□□□ -2.11
SWT1YOR166C PRP3Q03338 469 aaPredicted RBP1.85□□□□□ -2.11
SWT1YOR166C YDL114WQ07530 308 aa1.85□□□□□ -2.11
SWT1YOR166C YFH1Q07540 174 aa1.85□□□□□ -2.11
SWT1YOR166C YPQ1Q12010 308 aa1.85□□□□□ -2.11
SWT1YOR166C HIF1Q12373 385 aa1.85□□□□□ -2.11
SWT1YOR166C RRD2Q12461 358 aa1.85□□□□□ -2.11
SWT1YOR166C YCR024C-BQ3E7Z8 88 aa1.85□□□□□ -2.11
SWT1YOR166C CYC3P06182 269 aa1.85□□□□□ -2.11
SWT1YOR166C RPS8AP0CX39 200 aaKnown RBP1.85□□□□□ -2.11
SWT1YOR166C RPS8BP0CX40 200 aaKnown RBP1.85□□□□□ -2.11
SWT1YOR166C ZIP1P31111 875 aa1.85□□□□□ -2.11
SWT1YOR166C KAR9P32526 644 aa1.85□□□□□ -2.11
SWT1YOR166C UTH1P36135 365 aa1.85□□□□□ -2.11
SWT1YOR166C LSM12P38828 187 aaKnown RBP1.85□□□□□ -2.11
SWT1YOR166C MIG3P39943 394 aa1.85□□□□□ -2.11
SWT1YOR166C GAB1P41733 394 aa1.85□□□□□ -2.11
SWT1YOR166C YJR085CP47131 105 aaKnown RBP1.85□□□□□ -2.11
SWT1YOR166C TOM22P49334 152 aa1.85□□□□□ -2.11
SWT1YOR166C REX2P54964 269 aaKnown RBP1.85□□□□□ -2.11
SWT1YOR166C GAS2Q06135 555 aa1.85□□□□□ -2.11
SWT1YOR166C ASA1Q06822 443 aa1.85□□□□□ -2.11
SWT1YOR166C SHS1Q07657 551 aa1.85□□□□□ -2.11
SWT1YOR166C PEX27Q08580 376 aa1.85□□□□□ -2.11
SWT1YOR166C SPT7P35177 1332 aa1.84□□□□□ -2.12
SWT1YOR166C PHO84P25297 587 aaKnown RBP1.84□□□□□ -2.12
SWT1YOR166C EFB1P32471 206 aaKnown RBP1.84□□□□□ -2.12
SWT1YOR166C GPI16P38875 610 aa1.84□□□□□ -2.12
SWT1YOR166C YER184CP39961 794 aa1.84□□□□□ -2.12
SWT1YOR166C SER3P40054 469 aa1.84□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms