RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A ECM13P38195 257 aa3.21□□□□□ -1.9
YSF3YNL138W-A UTP9P38882 575 aaKnown RBP3.21□□□□□ -1.9
YSF3YNL138W-A CUE3P53137 624 aaKnown RBP3.21□□□□□ -1.9
YSF3YNL138W-A TAF11Q04226 346 aa3.21□□□□□ -1.9
YSF3YNL138W-A SCW10Q04951 389 aa3.21□□□□□ -1.9
YSF3YNL138W-A SRO7Q12038 1033 aa3.21□□□□□ -1.9
YSF3YNL138W-A SMC6Q12749 1114 aa3.21□□□□□ -1.9
YSF3YNL138W-A ATP10P18496 279 aa3.2□□□□□ -1.9
YSF3YNL138W-A VPS1P21576 704 aaKnown RBP3.2□□□□□ -1.9
YSF3YNL138W-A PUT3P25502 979 aaPredicted RBP3.2□□□□□ -1.9
YSF3YNL138W-A RAD14P28519 371 aa3.2□□□□□ -1.9
YSF3YNL138W-A VMA13P41807 478 aaKnown RBP3.2□□□□□ -1.9
YSF3YNL138W-A EPL1P43572 832 aa3.2□□□□□ -1.9
YSF3YNL138W-A YGR149WP48236 432 aa3.2□□□□□ -1.9
YSF3YNL138W-A TOF1P53840 1238 aa3.2□□□□□ -1.9
YSF3YNL138W-A GIS2P53849 153 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
YSF3YNL138W-A RQC1Q05468 723 aaKnown RBP3.2□□□□□ -1.9
YSF3YNL138W-A PER33Q12144 273 aa3.2□□□□□ -1.9
YSF3YNL138W-A RTN2Q12443 393 aa3.2□□□□□ -1.9
YSF3YNL138W-A YOL159C-AQ3E769 90 aa3.2□□□□□ -1.9
YSF3YNL138W-A LEU4P06208 619 aaKnown RBP3.19□□□□□ -1.9
YSF3YNL138W-A CDC31P06704 161 aaKnown RBP3.19□□□□□ -1.9
YSF3YNL138W-A RPL3P14126 387 aaKnown RBP3.19□□□□□ -1.9
YSF3YNL138W-A RED1P14291 827 aa3.19□□□□□ -1.9
YSF3YNL138W-A RNA14P25298 677 aaKnown RBP3.19□□□□□ -1.9
YSF3YNL138W-A IDH2P28241 369 aaKnown RBP3.19□□□□□ -1.9
YSF3YNL138W-A BMH2P34730 273 aaKnown RBP3.19□□□□□ -1.9
YSF3YNL138W-A KDX1P36005 433 aa3.19□□□□□ -1.9
YSF3YNL138W-A RSM22P36056 628 aa3.19□□□□□ -1.9
YSF3YNL138W-A TAE1P38340 232 aa3.19□□□□□ -1.9
YSF3YNL138W-A ISC1P40015 477 aaKnown RBP3.19□□□□□ -1.9
YSF3YNL138W-A GCD10P41814 478 aa3.19□□□□□ -1.9
YSF3YNL138W-A SPG5P42933 373 aa3.19□□□□□ -1.9
YSF3YNL138W-A AVT4P50944 713 aa3.19□□□□□ -1.9
YSF3YNL138W-A CLP1Q08685 445 aaPredicted RBP3.19□□□□□ -1.9
YSF3YNL138W-A DDC1Q08949 612 aa3.19□□□□□ -1.9
YSF3YNL138W-A YCL021W-AQ96VH3 125 aa3.19□□□□□ -1.9
YSF3YNL138W-A RHO2P06781 192 aa3.18□□□□□ -1.9
YSF3YNL138W-A FRS2P15625 503 aaKnown RBP3.18□□□□□ -1.9
YSF3YNL138W-A ERG3P32353 365 aa3.18□□□□□ -1.9
YSF3YNL138W-A HXT3P32466 567 aaKnown RBP3.18□□□□□ -1.9
YSF3YNL138W-A PXA2P34230 853 aa3.18□□□□□ -1.9
YSF3YNL138W-A IDP2P41939 412 aa3.18□□□□□ -1.9
YSF3YNL138W-A URB2P47108 1174 aa3.18□□□□□ -1.9
YSF3YNL138W-A HSH155P49955 971 aaKnown RBP3.18□□□□□ -1.9
YSF3YNL138W-A BOR1P53838 576 aa3.18□□□□□ -1.9
YSF3YNL138W-A YLL056CQ12177 298 aa3.18□□□□□ -1.9
YSF3YNL138W-A SPT15P13393 240 aaKnown RBP3.17□□□□□ -1.9
YSF3YNL138W-A CPR1P14832 162 aaKnown RBP3.17□□□□□ -1.9
YSF3YNL138W-A YIM1P28625 365 aa3.17□□□□□ -1.9
YSF3YNL138W-A NDI1P32340 513 aa3.17□□□□□ -1.9
YSF3YNL138W-A GLC7P32598 312 aaKnown RBP3.17□□□□□ -1.9
YSF3YNL138W-A CBP4P37267 147 aa3.17□□□□□ -1.9
YSF3YNL138W-A LSM4P40070 187 aaKnown RBP3.17□□□□□ -1.9
YSF3YNL138W-A DSE1P40077 573 aa3.17□□□□□ -1.9
YSF3YNL138W-A RRT5P43607 289 aa3.17□□□□□ -1.9
YSF3YNL138W-A ASG7P46993 209 aa3.17□□□□□ -1.9
YSF3YNL138W-A NBP35P52920 328 aa3.17□□□□□ -1.9
YSF3YNL138W-A EMC4P53073 190 aa3.17□□□□□ -1.9
YSF3YNL138W-A MSO1P53604 210 aaKnown RBP3.17□□□□□ -1.9
YSF3YNL138W-A TRM112P53738 135 aaPredicted RBP3.17□□□□□ -1.9
YSF3YNL138W-A RPA49Q01080 415 aaPredicted RBP3.17□□□□□ -1.9
YSF3YNL138W-A NUP116Q02630 1113 aa3.17□□□□□ -1.9
YSF3YNL138W-A YLR287CQ05881 355 aa3.17□□□□□ -1.9
YSF3YNL138W-A NKP2Q06162 153 aa3.17□□□□□ -1.9
YSF3YNL138W-A SIL1Q08199 421 aa3.17□□□□□ -1.9
YSF3YNL138W-A BSC6Q08280 497 aa3.17□□□□□ -1.9
YSF3YNL138W-A YCR100CP25606 316 aa3.16□□□□□ -1.9
YSF3YNL138W-A ATG15P25641 520 aa3.16□□□□□ -1.9
YSF3YNL138W-A AVT5P38176 459 aa3.16□□□□□ -1.9
YSF3YNL138W-A TFG2P41896 400 aaPredicted RBP3.16□□□□□ -1.9
YSF3YNL138W-A TRS85P46944 698 aa3.16□□□□□ -1.9
YSF3YNL138W-A YJL132WP47014 750 aa3.16□□□□□ -1.9
YSF3YNL138W-A YJR054WP47114 497 aa3.16□□□□□ -1.9
YSF3YNL138W-A SRB7P47822 140 aa3.16□□□□□ -1.9
YSF3YNL138W-A RMD9P53140 646 aaKnown RBP3.16□□□□□ -1.9
YSF3YNL138W-A COG7P53195 279 aa3.16□□□□□ -1.9
YSF3YNL138W-A SPC19Q03954 165 aa3.16□□□□□ -1.9
YSF3YNL138W-A SOV1Q04748 898 aa3.16□□□□□ -1.9
YSF3YNL138W-A CUR1Q06469 252 aa3.16□□□□□ -1.9
YSF3YNL138W-A TLG2Q08144 397 aa3.16□□□□□ -1.9
YSF3YNL138W-A HNT3Q08702 217 aa3.16□□□□□ -1.9
YSF3YNL138W-A CEX1Q12453 761 aa3.16□□□□□ -1.9
YSF3YNL138W-A UBR1P19812 1950 aa3.15□□□□□ -1.91
YSF3YNL138W-A SPS4P09937 338 aa3.15□□□□□ -1.91
YSF3YNL138W-A PMR1P13586 950 aa3.15□□□□□ -1.91
YSF3YNL138W-A MUD1P32605 298 aaKnown RBP3.15□□□□□ -1.91
YSF3YNL138W-A MRP4P32902 394 aa3.15□□□□□ -1.91
YSF3YNL138W-A NIP100P33420 868 aa3.15□□□□□ -1.91
YSF3YNL138W-A YCR041WP37265 110 aa3.15□□□□□ -1.91
YSF3YNL138W-A OTU2P38747 307 aaKnown RBP3.15□□□□□ -1.91
YSF3YNL138W-A CCT2P39076 527 aaKnown RBP3.15□□□□□ -1.91
YSF3YNL138W-A MKT1P40850 830 aaKnown RBP3.15□□□□□ -1.91
YSF3YNL138W-A POP6P53218 158 aa3.15□□□□□ -1.91
YSF3YNL138W-A PCP1P53259 346 aa3.15□□□□□ -1.91
YSF3YNL138W-A YNL040WP53960 456 aaPredicted RBP3.15□□□□□ -1.91
YSF3YNL138W-A MZM1Q03429 123 aaPredicted RBP3.15□□□□□ -1.91
YSF3YNL138W-A YMR155WQ03795 547 aa3.15□□□□□ -1.91
YSF3YNL138W-A SPG3Q04398 127 aaPredicted RBP3.15□□□□□ -1.91
YSF3YNL138W-A VTA1Q06263 330 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms