RNA–Protein interactions for RNA: YNL006W

LST8, Transcript of Protein required for the transport of Gap1p, yeast

Gene LST8, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LST8	YNL006W	CUP9	P41817	306 aa		5.22	□□□□□ -1.57
LST8	YNL006W	YJL043W	P47053	257 aa		5.22	□□□□□ -1.57
LST8	YNL006W	MPS3	P47069	682 aa		5.22	□□□□□ -1.57
LST8	YNL006W	SPT20	P50875	604 aa		5.22	□□□□□ -1.57
LST8	YNL006W	OCA1	P50946	238 aa	Predicted RBP	5.22	□□□□□ -1.57
LST8	YNL006W	YGR067C	P53243	804 aa		5.22	□□□□□ -1.57
LST8	YNL006W	TPC1	P53257	314 aa		5.22	□□□□□ -1.57
LST8	YNL006W	TNA1	P53322	534 aa		5.22	□□□□□ -1.57
LST8	YNL006W	ARC35	P53731	342 aa	Known RBP	5.22	□□□□□ -1.57
LST8	YNL006W	SNP1	Q00916	300 aa	Predicted RBP	5.22	□□□□□ -1.57
LST8	YNL006W	IRC15	Q02733	499 aa		5.22	□□□□□ -1.57
LST8	YNL006W	YPL071C	Q02864	156 aa		5.22	□□□□□ -1.57
LST8	YNL006W	EFR3	Q03653	782 aa	Known RBP	5.22	□□□□□ -1.57
LST8	YNL006W	YLR036C	Q07986	203 aa		5.22	□□□□□ -1.57
LST8	YNL006W	YOL131W	Q08270	108 aa		5.22	□□□□□ -1.57
LST8	YNL006W	RAX1	Q08760	435 aa		5.22	□□□□□ -1.57
LST8	YNL006W	AKR2	Q12013	749 aa		5.22	□□□□□ -1.57
LST8	YNL006W	SKS1	Q12505	502 aa		5.22	□□□□□ -1.57
LST8	YNL006W	TMA7	Q3E764	64 aa	Known RBP	5.22	□□□□□ -1.57
LST8	YNL006W	YPT1	P01123	206 aa	Known RBP	5.21	□□□□□ -1.58
LST8	YNL006W	GLK1	P17709	500 aa	Known RBP	5.21	□□□□□ -1.58
LST8	YNL006W	GPI12	P23797	304 aa		5.21	□□□□□ -1.58
LST8	YNL006W	CDC10	P25342	322 aa	Known RBP	5.21	□□□□□ -1.58
LST8	YNL006W	PHO91	P27514	894 aa		5.21	□□□□□ -1.58
LST8	YNL006W	DGR2	P32330	852 aa		5.21	□□□□□ -1.58
LST8	YNL006W	YBR139W	P38109	508 aa		5.21	□□□□□ -1.58
LST8	YNL006W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.58	not detected
LST8	YNL006W	GDT1	P38301	280 aa	Predicted RBP	5.21	□□□□□ -1.58
LST8	YNL006W	CIN4	P39110	191 aa		5.21	□□□□□ -1.58
LST8	YNL006W	RGI1	P40043	161 aa	Predicted RBP	5.21	□□□□□ -1.58
LST8	YNL006W	YJR120W	P47157	116 aa		5.21	□□□□□ -1.58
LST8	YNL006W	MTR3	P48240	250 aa	Predicted RBP	5.21	□□□□□ -1.58
LST8	YNL006W	SUR7	P54003	302 aa		5.21	□□□□□ -1.58
LST8	YNL006W	MCH5	Q08777	521 aa		5.21	□□□□□ -1.58
LST8	YNL006W	YPR202W	Q08993	238 aa		5.21	□□□□□ -1.58
LST8	YNL006W	YRM1	Q12340	786 aa		5.21	□□□□□ -1.58
LST8	YNL006W	RAP1	P11938	827 aa		5.2	□□□□□ -1.58
LST8	YNL006W	MCK1	P21965	375 aa	Known RBP	5.2	□□□□□ -1.58
LST8	YNL006W	SAN1	P22470	610 aa		5.2	□□□□□ -1.58
LST8	YNL006W	YJU2	P28320	278 aa	Predicted RBP	5.2	□□□□□ -1.58
LST8	YNL006W	SSH4	P32343	579 aa		5.2	□□□□□ -1.58
LST8	YNL006W	DCG1	P32460	244 aa		5.2	□□□□□ -1.58
LST8	YNL006W	ORC2	P32833	620 aa		5.2	□□□□□ -1.58
LST8	YNL006W	REC104	P33323	182 aa		5.2	□□□□□ -1.58
LST8	YNL006W	SPC29	P33419	253 aa		5.2	□□□□□ -1.58
LST8	YNL006W	MSN2	P33748	704 aa		5.2	□□□□□ -1.58
LST8	YNL006W	KAE1	P36132	386 aa		5.2	□□□□□ -1.58
LST8	YNL006W	FES1	P38260	290 aa		5.2	□□□□□ -1.58
LST8	YNL006W	FRT2	P39734	528 aa		5.2	□□□□□ -1.58
LST8	YNL006W	VPS52	P39904	641 aa		5.2	□□□□□ -1.58
LST8	YNL006W	RIC1	P40395	1056 aa		5.2	□□□□□ -1.58
LST8	YNL006W	LYS12	P40495	371 aa	Known RBP	5.2	□□□□□ -1.58
LST8	YNL006W	GAB1	P41733	394 aa		5.2	□□□□□ -1.58
LST8	YNL006W	DAM1	P53267	343 aa		5.2	□□□□□ -1.58
LST8	YNL006W	MPA43	P53583	542 aa	Predicted RBP	5.2	□□□□□ -1.58
LST8	YNL006W	YMR210W	Q03649	449 aa		5.2	□□□□□ -1.58
LST8	YNL006W	NUP53	Q03790	475 aa		5.2	□□□□□ -1.58
LST8	YNL006W	YOR376W	Q08900	122 aa		5.2	□□□□□ -1.58
LST8	YNL006W	YTM1	Q12024	460 aa	Predicted RBP	5.2	□□□□□ -1.58
LST8	YNL006W	TMS1	Q12116	473 aa		5.2	□□□□□ -1.58
LST8	YNL006W	BSC1	Q12140	328 aa		5.2	□□□□□ -1.58
LST8	YNL006W	RPN6	Q12377	434 aa		5.2	□□□□□ -1.58
LST8	YNL006W	PRP46	Q12417	451 aa	Predicted RBP	5.2	□□□□□ -1.58
LST8	YNL006W	RRP36	Q12481	300 aa	Predicted RBP	5.2	□□□□□ -1.58
LST8	YNL006W	YSF3	P0C074	85 aa	Predicted RBP	5.19	□□□□□ -1.58
LST8	YNL006W	RVS161	P25343	265 aa	Known RBP	5.19	□□□□□ -1.58
LST8	YNL006W	ADH7	P25377	361 aa		5.19	□□□□□ -1.58
LST8	YNL006W	EMP70	P32802	667 aa		5.19	□□□□□ -1.58
LST8	YNL006W	LST4	P34239	828 aa		5.19	□□□□□ -1.58
LST8	YNL006W	CUE2	P36075	443 aa	Known RBP	5.19	□□□□□ -1.58
LST8	YNL006W	TUL1	P36096	758 aa		5.19	□□□□□ -1.58
LST8	YNL006W	ROT2	P38138	954 aa		5.19	□□□□□ -1.58
LST8	YNL006W	OM14	P38325	134 aa		5.19	□□□□□ -1.58
LST8	YNL006W	TSC10	P38342	320 aa		5.19	□□□□□ -1.58
LST8	YNL006W	TSL1	P38427	1098 aa	Known RBP	5.19	□□□□□ -1.58
LST8	YNL006W	TRR2	P38816	342 aa		5.19	□□□□□ -1.58
LST8	YNL006W	PTI1	P39927	425 aa	Predicted RBP	5.19	□□□□□ -1.58
LST8	YNL006W	SER3	P40054	469 aa		5.19	□□□□□ -1.58
LST8	YNL006W	TMA22	P47089	198 aa	Predicted RBP	5.19	□□□□□ -1.58
LST8	YNL006W	YJR141W	P47172	347 aa	Predicted RBP	5.19	□□□□□ -1.58
LST8	YNL006W	NIT3	P49954	291 aa		5.19	□□□□□ -1.58
LST8	YNL006W	ATP22	P50273	684 aa	Predicted RBP	5.19	□□□□□ -1.58
LST8	YNL006W	COG2	P53271	262 aa		5.19	□□□□□ -1.58
LST8	YNL006W	ATG21	Q02887	496 aa		5.19	□□□□□ -1.58
LST8	YNL006W	HFD1	Q04458	532 aa		5.19	□□□□□ -1.58
LST8	YNL006W	GMC2	Q06201	188 aa		5.19	□□□□□ -1.58
LST8	YNL006W	YOL024W	Q08172	172 aa		5.19	□□□□□ -1.58
LST8	YNL006W	YPL272C	Q08984	517 aa		5.19	□□□□□ -1.58
LST8	YNL006W	IPP1	P00817	287 aa	Known RBP	5.18	□□□□□ -1.58
LST8	YNL006W	ATP6	P00854	259 aa		5.18	□□□□□ -1.58
LST8	YNL006W	TPK2	P06245	380 aa		5.18	□□□□□ -1.58
LST8	YNL006W	RPL20A	P0CX23	172 aa	Known RBP	5.18	□□□□□ -1.58
LST8	YNL006W	RPL20B	P0CX24	172 aa	Predicted RBP	5.18	□□□□□ -1.58
LST8	YNL006W	RPB5	P20434	215 aa		5.18	□□□□□ -1.58
LST8	YNL006W	SEC62	P21825	274 aa		5.18	□□□□□ -1.58
LST8	YNL006W	MKK1	P32490	508 aa		5.18	□□□□□ -1.58
LST8	YNL006W	MTC2	P34246	357 aa		5.18	□□□□□ -1.58
LST8	YNL006W	TRM5	P38793	499 aa		5.18	□□□□□ -1.58
LST8	YNL006W	YHR177W	P38867	453 aa		5.18	□□□□□ -1.58
LST8	YNL006W	CCT7	P42943	550 aa	Known RBP	5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms