RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C FOL2P51601 243 aaKnown RBP3.32□□□□□ -1.88
SHH3YMR118C UBC12P52491 188 aa3.32□□□□□ -1.88
SHH3YMR118C NBP35P52920 328 aa3.32□□□□□ -1.88
SHH3YMR118C SCS3P53012 380 aa3.32□□□□□ -1.88
SHH3YMR118C MPC1P53157 130 aaKnown RBP3.32□□□□□ -1.88
SHH3YMR118C RRN9P53437 365 aa3.32□□□□□ -1.88
SHH3YMR118C LSM7P53905 115 aaKnown RBP3.32□□□□□ -1.88
SHH3YMR118C MTD1Q02046 320 aaKnown RBP3.32□□□□□ -1.88
SHH3YMR118C YPL068CQ02749 293 aa3.32□□□□□ -1.88
SHH3YMR118C FDC1Q03034 503 aa3.32□□□□□ -1.88
SHH3YMR118C RCR2Q03446 210 aaKnown RBP3.32□□□□□ -1.88
SHH3YMR118C SCS7Q03529 384 aa3.32□□□□□ -1.88
SHH3YMR118C VHS1Q03785 461 aa3.32□□□□□ -1.88
SHH3YMR118C YMR087WQ04299 284 aa3.32□□□□□ -1.88
SHH3YMR118C GSF2Q04697 403 aaKnown RBP3.32□□□□□ -1.88
SHH3YMR118C MFB1Q04922 465 aa3.32□□□□□ -1.88
SHH3YMR118C YLR446WQ06204 433 aa3.32□□□□□ -1.88
SHH3YMR118C NUT2Q06213 157 aa3.32□□□□□ -1.88
SHH3YMR118C DXO1Q06349 442 aa3.32□□□□□ -1.88
SHH3YMR118C MLC2Q06580 163 aa3.32□□□□□ -1.88
SHH3YMR118C RRT8Q08219 342 aa3.32□□□□□ -1.88
SHH3YMR118C SYC1Q08553 188 aaPredicted RBP3.32□□□□□ -1.88
SHH3YMR118C ENV7Q12003 364 aa3.32□□□□□ -1.88
SHH3YMR118C YDR056CQ12025 205 aa3.32□□□□□ -1.88
SHH3YMR118C SVS1Q12254 260 aa3.32□□□□□ -1.88
SHH3YMR118C ATP14Q12349 124 aa3.32□□□□□ -1.88
SHH3YMR118C SNU23Q12368 194 aaPredicted RBP3.32□□□□□ -1.88
SHH3YMR118C WHI5Q12416 295 aa3.32□□□□□ -1.88
SHH3YMR118C SKM1Q12469 655 aa3.32□□□□□ -1.88
SHH3YMR118C LSO2Q3E772 92 aaKnown RBP3.32□□□□□ -1.88
SHH3YMR118C YHR213W-AQ8TGT4 77 aa3.32□□□□□ -1.88
SHH3YMR118C MTR10Q99189 972 aa3.32□□□□□ -1.88
SHH3YMR118C MOT1P32333 1867 aa3.31□□□□□ -1.88
SHH3YMR118C YBR085C-AO43137 85 aa3.31□□□□□ -1.88
SHH3YMR118C CYC1P00044 109 aaPredicted RBP3.31□□□□□ -1.88
SHH3YMR118C GCN4P03069 281 aa3.31□□□□□ -1.88
SHH3YMR118C RPC40P07703 335 aaKnown RBP3.31□□□□□ -1.88
SHH3YMR118C SPS2P08459 502 aa3.31□□□□□ -1.88
SHH3YMR118C POX1P13711 748 aa3.31□□□□□ -1.88
SHH3YMR118C BUD5P25300 642 aaPredicted RBP3.31□□□□□ -1.88
SHH3YMR118C RBK1P25332 333 aa3.31□□□□□ -1.88
SHH3YMR118C RRP7P25368 297 aaPredicted RBP3.31□□□□□ -1.88
SHH3YMR118C SYP1P25623 870 aaKnown RBP3.31□□□□□ -1.88
SHH3YMR118C SNC1P31109 117 aa3.31□□□□□ -1.88
SHH3YMR118C GSH1P32477 678 aa3.31□□□□□ -1.88
SHH3YMR118C NDC1P32500 655 aa3.31□□□□□ -1.88
SHH3YMR118C PET309P32522 965 aaPredicted RBP3.31□□□□□ -1.88
SHH3YMR118C SSO1P32867 290 aa3.31□□□□□ -1.88
SHH3YMR118C PDR3P33200 976 aa3.31□□□□□ -1.88
SHH3YMR118C DHR2P36009 735 aaPredicted RBP3.31□□□□□ -1.88
SHH3YMR118C APT2P36973 181 aa3.31□□□□□ -1.88
SHH3YMR118C YBR063CP38083 404 aa3.31□□□□□ -1.88
SHH3YMR118C ECM31P38122 312 aa3.31□□□□□ -1.88
SHH3YMR118C MCM7P38132 845 aa3.31□□□□□ -1.88
SHH3YMR118C BMT2P38278 337 aa3.31□□□□□ -1.88
SHH3YMR118C GND1P38720 489 aaKnown RBP3.31□□□□□ -1.88
SHH3YMR118C YHR035WP38769 630 aa3.31□□□□□ -1.88
SHH3YMR118C RRP4P38792 359 aaKnown RBP3.31□□□□□ -1.88
SHH3YMR118C BIG1P38813 335 aa3.31□□□□□ -1.88
SHH3YMR118C PTI1P39927 425 aaPredicted RBP3.31□□□□□ -1.88
SHH3YMR118C VAC8P39968 578 aa3.31□□□□□ -1.88
SHH3YMR118C HPA3P39979 161 aa3.31□□□□□ -1.88
SHH3YMR118C ZRG8P40021 1076 aa3.31□□□□□ -1.88
SHH3YMR118C EMP65P40085 556 aa3.31□□□□□ -1.88
SHH3YMR118C MEP1P40260 492 aa3.31□□□□□ -1.88
SHH3YMR118C LAS21P40367 830 aa3.31□□□□□ -1.88
SHH3YMR118C PHB1P40961 287 aa3.31□□□□□ -1.88
SHH3YMR118C GDS1P41913 522 aa3.31□□□□□ -1.88
SHH3YMR118C SLS1P42900 643 aa3.31□□□□□ -1.88
SHH3YMR118C YFL052WP43551 465 aa3.31□□□□□ -1.88
SHH3YMR118C IRC7P43623 340 aa3.31□□□□□ -1.88
SHH3YMR118C AIM22P47051 409 aa3.31□□□□□ -1.88
SHH3YMR118C MRX6P48564 524 aa3.31□□□□□ -1.88
SHH3YMR118C JAC1P53193 184 aa3.31□□□□□ -1.88
SHH3YMR118C GTF1P53260 183 aaPredicted RBP3.31□□□□□ -1.88
SHH3YMR118C IPI3P53877 555 aa3.31□□□□□ -1.88
SHH3YMR118C MET31Q03081 177 aa3.31□□□□□ -1.88
SHH3YMR118C SNZ1Q03148 297 aa3.31□□□□□ -1.88
SHH3YMR118C GCN5Q03330 439 aa3.31□□□□□ -1.88
SHH3YMR118C TDA1Q03533 586 aa3.31□□□□□ -1.88
SHH3YMR118C NSE5Q03718 556 aa3.31□□□□□ -1.88
SHH3YMR118C TRM82Q03774 444 aa3.31□□□□□ -1.88
SHH3YMR118C YDR249CQ03787 373 aa3.31□□□□□ -1.88
SHH3YMR118C ARX1Q03862 593 aaKnown RBP3.31□□□□□ -1.88
SHH3YMR118C SIZ1Q04195 904 aa3.31□□□□□ -1.88
SHH3YMR118C SSL1Q04673 461 aaPredicted RBP3.31□□□□□ -1.88
SHH3YMR118C ATG38Q05789 226 aaKnown RBP3.31□□□□□ -1.88
SHH3YMR118C YLR224WQ05947 369 aa3.31□□□□□ -1.88
SHH3YMR118C DCS1Q06151 350 aa3.31□□□□□ -1.88
SHH3YMR118C HBT1Q07653 1046 aaKnown RBP3.31□□□□□ -1.88
SHH3YMR118C CLP1Q08685 445 aaPredicted RBP3.31□□□□□ -1.88
SHH3YMR118C YTM1Q12024 460 aaPredicted RBP3.31□□□□□ -1.88
SHH3YMR118C YOL107WQ12239 342 aa3.31□□□□□ -1.88
SHH3YMR118C SFG1Q12507 346 aa3.31□□□□□ -1.88
SHH3YMR118C YCL012CQ8J0M4 134 aa3.31□□□□□ -1.88
SHH3YMR118C GSC2P40989 1895 aa3.3□□□□□ -1.88
SHH3YMR118C SOD2P00447 233 aa3.3□□□□□ -1.88
SHH3YMR118C RPS13P05756 151 aaKnown RBP3.3□□□□□ -1.88
SHH3YMR118C PEP4P07267 405 aaKnown RBP3.3□□□□□ -1.88
SHH3YMR118C PET494P07390 489 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms