RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C RSA3Q05942 220 aaKnown RBP8.59□□□□□ -1.03
SEC61YLR378C BSC1Q12140 328 aa8.59□□□□□ -1.03
SEC61YLR378C NFI1Q12216 726 aa8.59□□□□□ -1.03
SEC61YLR378C SNF5P18480 905 aa8.58□□□□□ -1.04
SEC61YLR378C DPB2P24482 689 aaPredicted RBP8.58□□□□□ -1.04
SEC61YLR378C CWP1P28319 239 aa8.58□□□□□ -1.04
SEC61YLR378C NRP1P32770 719 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
SEC61YLR378C CTF8P38877 133 aa8.58□□□□□ -1.04
SEC61YLR378C IPT1P38954 527 aa8.58□□□□□ -1.04
SEC61YLR378C KRE29P40026 464 aa8.58□□□□□ -1.04
SEC61YLR378C PRE6P40303 254 aaKnown RBP8.58□□□□□ -1.04
SEC61YLR378C TED1P40533 473 aa8.58□□□□□ -1.04
SEC61YLR378C IRC5P43610 853 aa8.58□□□□□ -1.04
SEC61YLR378C SHE4P51534 789 aa8.58□□□□□ -1.04
SEC61YLR378C SNF12P53628 566 aa8.58□□□□□ -1.04
SEC61YLR378C MTQ1P53944 314 aa8.58□□□□□ -1.04
SEC61YLR378C SRL4Q03085 281 aa8.58□□□□□ -1.04
SEC61YLR378C YMD8Q03697 442 aa8.58□□□□□ -1.04
SEC61YLR378C RNH202Q05635 350 aa8.58□□□□□ -1.04
SEC61YLR378C STP3Q05937 343 aa8.58□□□□□ -1.04
SEC61YLR378C YLR030WQ07967 263 aa8.58□□□□□ -1.04
SEC61YLR378C HER1Q12276 1246 aa8.58□□□□□ -1.04
SEC61YLR378C PST2Q12335 198 aaKnown RBP8.58□□□□□ -1.04
SEC61YLR378C TRM10Q12400 293 aa8.58□□□□□ -1.04
SEC61YLR378C YPL119C-AQ3E751 87 aa8.58□□□□□ -1.04
SEC61YLR378C TFS1P14306 219 aa8.57□□□□□ -1.04
SEC61YLR378C PRP2P20095 876 aaPredicted RBP8.57□□□□□ -1.04
SEC61YLR378C CHA1P25379 360 aaKnown RBP8.57□□□□□ -1.04
SEC61YLR378C VPS51P36116 164 aa8.57□□□□□ -1.04
SEC61YLR378C AST2P39945 430 aaKnown RBP8.57□□□□□ -1.04
SEC61YLR378C GCN20P43535 752 aaKnown RBP8.57□□□□□ -1.04
SEC61YLR378C NUP57P48837 541 aa8.57□□□□□ -1.04
SEC61YLR378C YSA1Q01976 231 aa8.57□□□□□ -1.04
SEC61YLR378C NAT4Q04751 285 aa8.57□□□□□ -1.04
SEC61YLR378C VPS36Q06696 566 aa8.57□□□□□ -1.04
SEC61YLR378C RKM5Q12367 367 aa8.57□□□□□ -1.04
SEC61YLR378C THR1P17423 357 aaKnown RBP8.56□□□□□ -1.04
SEC61YLR378C AHP1P38013 176 aaKnown RBP8.56□□□□□ -1.04
SEC61YLR378C YTA6P40328 754 aa8.56□□□□□ -1.04
SEC61YLR378C RIM21P48565 533 aa8.56□□□□□ -1.04
SEC61YLR378C ASI1P54074 624 aa8.56□□□□□ -1.04
SEC61YLR378C YLR345WQ06137 509 aa8.56□□□□□ -1.04
SEC61YLR378C DIC1Q06143 298 aa8.56□□□□□ -1.04
SEC61YLR378C YOL163WP0CF20 169 aa8.55□□□□□ -1.04
SEC61YLR378C RPL1AP0CX43 217 aaKnown RBP8.55□□□□□ -1.04
SEC61YLR378C RPL1BP0CX44 217 aaKnown RBP8.55□□□□□ -1.04
SEC61YLR378C CBS1P14066 229 aa8.55□□□□□ -1.04
SEC61YLR378C AAC3P18238 307 aa8.55□□□□□ -1.04
SEC61YLR378C CLB2P24869 491 aa8.55□□□□□ -1.04
SEC61YLR378C IMG1P25626 169 aa8.55□□□□□ -1.04
SEC61YLR378C UTP11P34247 250 aaPredicted RBP8.55□□□□□ -1.04
SEC61YLR378C YOR062CP36025 268 aa8.55□□□□□ -1.04
SEC61YLR378C AUR1P36107 401 aaPredicted RBP8.55□□□□□ -1.04
SEC61YLR378C SBE22P38814 852 aa8.55□□□□□ -1.04
SEC61YLR378C RRG9P40156 214 aa8.55□□□□□ -1.04
SEC61YLR378C RET2P43621 546 aa8.55□□□□□ -1.04
SEC61YLR378C TIM54P47045 478 aa8.55□□□□□ -1.04
SEC61YLR378C MPC1P53157 130 aaKnown RBP8.55□□□□□ -1.04
SEC61YLR378C NQM1P53228 333 aaPredicted RBP8.55□□□□□ -1.04
SEC61YLR378C SIZ1Q04195 904 aa8.55□□□□□ -1.04
SEC61YLR378C YPR172WQ06608 200 aa8.55□□□□□ -1.04
SEC61YLR378C RPC40P07703 335 aaKnown RBP8.54□□□□□ -1.04
SEC61YLR378C SAM35P14693 329 aa8.54□□□□□ -1.04
SEC61YLR378C IDP1P21954 428 aaKnown RBP8.54□□□□□ -1.04
SEC61YLR378C APN1P22936 367 aa8.54□□□□□ -1.04
SEC61YLR378C HIR2P32480 875 aa8.54□□□□□ -1.04
SEC61YLR378C MAE1P36013 669 aaKnown RBP8.54□□□□□ -1.04
SEC61YLR378C BET3P36149 193 aa8.54□□□□□ -1.04
SEC61YLR378C TRR2P38816 342 aa8.54□□□□□ -1.04
SEC61YLR378C YGR012WP53206 393 aa8.54□□□□□ -1.04
SEC61YLR378C RNH70P53331 553 aa8.54□□□□□ -1.04
SEC61YLR378C ABZ2Q03266 374 aa8.54□□□□□ -1.04
SEC61YLR378C NEJ1Q06148 342 aa8.54□□□□□ -1.04
SEC61YLR378C YPR091CQ06833 770 aa8.54□□□□□ -1.04
SEC61YLR378C YOR214CQ12282 236 aa8.54□□□□□ -1.04
SEC61YLR378C PRP19P32523 503 aaKnown RBP8.54□□□□□ -1.04
SEC61YLR378C HBS1P32769 611 aaKnown RBP8.54□□□□□ -1.04
SEC61YLR378C TAT2P38967 592 aa8.54□□□□□ -1.04
SEC61YLR378C TFB3Q03290 321 aa8.54□□□□□ -1.04
SEC61YLR378C FMP42Q04991 504 aa8.54□□□□□ -1.04
SEC61YLR378C RPS21BQ3E754 87 aaKnown RBP8.54□□□□□ -1.04
SEC61YLR378C SIR3P06701 978 aa8.53□□□□□ -1.04
SEC61YLR378C MOD5P07884 428 aa8.53□□□□□ -1.04
SEC61YLR378C ENA1P13587 1091 aa8.53□□□□□ -1.04
SEC61YLR378C YCK1P23291 538 aa8.53□□□□□ -1.04
SEC61YLR378C TOD6P34219 525 aa8.53□□□□□ -1.04
SEC61YLR378C FMP52P40008 231 aa8.53□□□□□ -1.04
SEC61YLR378C GIP2P40036 548 aa8.53□□□□□ -1.04
SEC61YLR378C CHA4P43634 648 aa8.53□□□□□ -1.04
SEC61YLR378C HMS2P47175 358 aa8.53□□□□□ -1.04
SEC61YLR378C IMD4P50094 524 aaKnown RBP8.53□□□□□ -1.04
SEC61YLR378C MEP3P53390 489 aa8.53□□□□□ -1.04
SEC61YLR378C ENA2Q01896 1091 aa8.53□□□□□ -1.04
SEC61YLR378C YPL068CQ02749 293 aa8.53□□□□□ -1.04
SEC61YLR378C GRX5Q02784 150 aa8.53□□□□□ -1.04
SEC61YLR378C OPT2Q06593 877 aa8.53□□□□□ -1.04
SEC61YLR378C MCM21Q06675 368 aa8.53□□□□□ -1.04
SEC61YLR378C FMP45Q07651 309 aa8.53□□□□□ -1.04
SEC61YLR378C NOP12Q08208 459 aaKnown RBP8.53□□□□□ -1.04
SEC61YLR378C YPL191CQ08930 360 aa8.53□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms