RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C STE24P47154 453 aa2.21□□□□□ -2.06
AFB1YLR040C YGR117CP53270 476 aa2.21□□□□□ -2.06
AFB1YLR040C RNY1Q02933 434 aaKnown RBP2.21□□□□□ -2.06
AFB1YLR040C ECM7Q06200 448 aa2.21□□□□□ -2.06
AFB1YLR040C YPR091CQ06833 770 aa2.21□□□□□ -2.06
AFB1YLR040C LOT6Q07923 191 aa2.21□□□□□ -2.06
AFB1YLR040C DNL4Q08387 944 aaPredicted RBP2.21□□□□□ -2.06
AFB1YLR040C RUP1Q12242 671 aa2.21□□□□□ -2.06
AFB1YLR040C RNH203Q12338 110 aa2.21□□□□□ -2.06
AFB1YLR040C YBL111CQ3E7Y5 667 aa2.21□□□□□ -2.06
AFB1YLR040C YCR024C-BQ3E7Z8 88 aa2.21□□□□□ -2.06
AFB1YLR040C PRB1P09232 635 aa2.2□□□□□ -2.06
AFB1YLR040C MDH1P17505 334 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
AFB1YLR040C HSP104P31539 908 aaKnown RBP2.2□□□□□ -2.06
AFB1YLR040C QDR3P38227 689 aa2.2□□□□□ -2.06
AFB1YLR040C TIM17P39515 158 aa2.2□□□□□ -2.06
AFB1YLR040C ALD5P40047 520 aaKnown RBP2.2□□□□□ -2.06
AFB1YLR040C PMT5P52867 743 aa2.2□□□□□ -2.06
AFB1YLR040C CLD1P53264 445 aa2.2□□□□□ -2.06
AFB1YLR040C RRN9P53437 365 aa2.2□□□□□ -2.06
AFB1YLR040C FCY22Q12119 530 aa2.2□□□□□ -2.06
AFB1YLR040C GPM3Q12326 303 aa2.2□□□□□ -2.06
AFB1YLR040C CEX1Q12453 761 aa2.2□□□□□ -2.06
AFB1YLR040C PSK1P31374 1356 aa2.2□□□□□ -2.06
AFB1YLR040C PAB1P04147 577 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
AFB1YLR040C PFS1P38872 237 aa2.19□□□□□ -2.06
AFB1YLR040C RRP46P53256 223 aaPredicted RBP2.19□□□□□ -2.06
AFB1YLR040C SKI8Q02793 397 aaPredicted RBP2.19□□□□□ -2.06
AFB1YLR040C VHS1Q03785 461 aa2.19□□□□□ -2.06
AFB1YLR040C NSE1Q07913 336 aa2.19□□□□□ -2.06
AFB1YLR040C DCI1Q08558 271 aa2.19□□□□□ -2.06
AFB1YLR040C RPL12AP0CX53 165 aaKnown RBP2.18□□□□□ -2.06
AFB1YLR040C RPL12BP0CX54 165 aa2.18□□□□□ -2.06
AFB1YLR040C ZRC1P20107 442 aa2.18□□□□□ -2.06
AFB1YLR040C NRP1P32770 719 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
AFB1YLR040C TOA2P32774 122 aa2.18□□□□□ -2.06
AFB1YLR040C YSC83P32792 385 aa2.18□□□□□ -2.06
AFB1YLR040C COX13P32799 129 aa2.18□□□□□ -2.06
AFB1YLR040C MCR1P36060 302 aaKnown RBP2.18□□□□□ -2.06
AFB1YLR040C GPI18P38211 433 aa2.18□□□□□ -2.06
AFB1YLR040C ECM8P38246 354 aa2.18□□□□□ -2.06
AFB1YLR040C ABM1P47146 123 aa2.18□□□□□ -2.06
AFB1YLR040C YPS5P53057 165 aa2.18□□□□□ -2.06
AFB1YLR040C ROG1P53118 685 aa2.18□□□□□ -2.06
AFB1YLR040C MKC7P53379 596 aa2.18□□□□□ -2.06
AFB1YLR040C PRM6Q04705 352 aa2.18□□□□□ -2.06
AFB1YLR040C YOP1Q12402 180 aa2.18□□□□□ -2.06
AFB1YLR040C YDL199CQ12407 687 aa2.18□□□□□ -2.06
AFB1YLR040C CBP6P07253 162 aaPredicted RBP2.17□□□□□ -2.06
AFB1YLR040C TIR2P33890 251 aa2.17□□□□□ -2.06
AFB1YLR040C LTV1P34078 463 aa2.17□□□□□ -2.06
AFB1YLR040C ATM1P40416 690 aa2.17□□□□□ -2.06
AFB1YLR040C KEG1P43614 200 aa2.17□□□□□ -2.06
AFB1YLR040C ALF1P53904 254 aa2.17□□□□□ -2.06
AFB1YLR040C URC2Q04411 772 aa2.17□□□□□ -2.06
AFB1YLR040C YHC1Q05900 231 aaKnown RBP2.17□□□□□ -2.06
AFB1YLR040C MCT1Q12283 360 aa2.17□□□□□ -2.06
AFB1YLR040C SMC6Q12749 1114 aa2.17□□□□□ -2.06
AFB1YLR040C TPK3P05986 398 aa2.16□□□□□ -2.06
AFB1YLR040C PHO91P27514 894 aa2.16□□□□□ -2.06
AFB1YLR040C FUN26P31381 517 aa2.16□□□□□ -2.06
AFB1YLR040C RAD5P32849 1169 aaPredicted RBP2.16□□□□□ -2.06
AFB1YLR040C SKT5P34226 696 aa2.16□□□□□ -2.06
AFB1YLR040C MPE1P35728 441 aaKnown RBP2.16□□□□□ -2.06
AFB1YLR040C MRPL27P36526 146 aaPredicted RBP2.16□□□□□ -2.06
AFB1YLR040C GEP4P38812 185 aa2.16□□□□□ -2.06
AFB1YLR040C IGD1P43598 195 aa2.16□□□□□ -2.06
AFB1YLR040C MEH1Q02205 184 aa2.16□□□□□ -2.06
AFB1YLR040C PRP3Q03338 469 aaPredicted RBP2.16□□□□□ -2.06
AFB1YLR040C ASA1Q06822 443 aa2.16□□□□□ -2.06
AFB1YLR040C YDL114WQ07530 308 aa2.16□□□□□ -2.06
AFB1YLR040C YPQ1Q12010 308 aa2.16□□□□□ -2.06
AFB1YLR040C PDE2P06776 526 aa2.15□□□□□ -2.07
AFB1YLR040C SLM5P25345 492 aaKnown RBP2.15□□□□□ -2.07
AFB1YLR040C MRPS9P38120 278 aa2.15□□□□□ -2.07
AFB1YLR040C YGL262WP53054 175 aa2.15□□□□□ -2.07
AFB1YLR040C TRM112P53738 135 aaPredicted RBP2.15□□□□□ -2.07
AFB1YLR040C GYL1Q04322 720 aa2.15□□□□□ -2.07
AFB1YLR040C NDL1Q06568 189 aa2.15□□□□□ -2.07
AFB1YLR040C SPE3Q12074 293 aaKnown RBP2.15□□□□□ -2.07
AFB1YLR040C RPL1AP0CX43 217 aaKnown RBP2.14□□□□□ -2.07
AFB1YLR040C RPL1BP0CX44 217 aaKnown RBP2.14□□□□□ -2.07
AFB1YLR040C ARF1P11076 181 aaKnown RBP2.14□□□□□ -2.07
AFB1YLR040C DEP1P31385 405 aa2.14□□□□□ -2.07
AFB1YLR040C VMA8P32610 256 aaKnown RBP2.14□□□□□ -2.07
AFB1YLR040C SPO23P33757 523 aa2.14□□□□□ -2.07
AFB1YLR040C DOA1P36037 715 aa2.14□□□□□ -2.07
AFB1YLR040C HEM14P40012 539 aa2.14□□□□□ -2.07
AFB1YLR040C BUD27P43573 796 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
AFB1YLR040C SEH1P53011 349 aaKnown RBP2.14□□□□□ -2.07
AFB1YLR040C TPS1Q00764 495 aaKnown RBP2.14□□□□□ -2.07
AFB1YLR040C ECM11Q04110 302 aa2.14□□□□□ -2.07
AFB1YLR040C FOL3Q12676 427 aaPredicted RBP2.14□□□□□ -2.07
AFB1YLR040C HTZ1Q12692 134 aaKnown RBP2.14□□□□□ -2.07
AFB1YLR040C GIT1P25346 518 aa2.13□□□□□ -2.07
AFB1YLR040C CHA1P25379 360 aaKnown RBP2.13□□□□□ -2.07
AFB1YLR040C ECT1P33412 323 aa2.13□□□□□ -2.07
AFB1YLR040C SRP72P38688 640 aaKnown RBP2.13□□□□□ -2.07
AFB1YLR040C YHR177WP38867 453 aa2.13□□□□□ -2.07
AFB1YLR040C EFM4P40516 257 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms