RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeast

Gene SWD2, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWD2	YKL018W	AAD15	Q08361	143 aa		3.19	□□□□□ -1.9
SWD2	YKL018W	PEX27	Q08580	376 aa		3.19	□□□□□ -1.9
SWD2	YKL018W	TIM18	Q08749	192 aa		3.19	□□□□□ -1.9
SWD2	YKL018W	PKH2	Q12236	1081 aa	Known RBP	3.19	□□□□□ -1.9
SWD2	YKL018W	REV3	P14284	1504 aa		3.19	□□□□□ -1.9
SWD2	YKL018W	OPI3	P05375	206 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	SAM1	P10659	382 aa	Known RBP	3.18	□□□□□ -1.9
SWD2	YKL018W	ATR1	P13090	542 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	SPO12	P17123	173 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	SAM2	P19358	384 aa	Known RBP	3.18	□□□□□ -1.9
SWD2	YKL018W	TIP1	P27654	210 aa	Predicted RBP	3.18	□□□□□ -1.9
SWD2	YKL018W	PSO2	P30620	661 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	GLC7	P32598	312 aa	Known RBP	3.18	□□□□□ -1.9
SWD2	YKL018W	SKN1	P33336	771 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	PTK1	P36002	662 aa	Predicted RBP	3.18	□□□□□ -1.9
SWD2	YKL018W	ATP3	P38077	311 aa	Known RBP	3.18	□□□□□ -1.9
SWD2	YKL018W	HAT2	P39984	401 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	SPG5	P42933	373 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	EFM3	P47163	339 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	YNR048W	P53740	393 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	PIR3	Q03180	325 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	ECM7	Q06200	448 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	YPL199C	Q08954	240 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	SRL2	Q12020	392 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	RNH203	Q12338	110 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	APC2	Q12440	853 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	SFG1	Q12507	346 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	HSL1	P34244	1518 aa		3.18	□□□□□ -1.9
SWD2	YKL018W	HEM2	P05373	342 aa		3.17	□□□□□ -1.9
SWD2	YKL018W	SUP35	P05453	685 aa	Known RBP	3.17	□□□□□ -1.9
SWD2	YKL018W	YCR022C	P25620	114 aa		3.17	□□□□□ -1.9
SWD2	YKL018W	RME1	P32338	300 aa	Known RBP	3.17	□□□□□ -1.9
SWD2	YKL018W	SSE1	P32589	693 aa	Known RBP	3.17	□□□□□ -1.9
SWD2	YKL018W	COX13	P32799	129 aa		3.17	□□□□□ -1.9
SWD2	YKL018W	COY1	P34237	679 aa		3.17	□□□□□ -1.9
SWD2	YKL018W	SPT10	P35208	640 aa		3.17	□□□□□ -1.9
SWD2	YKL018W	KKQ8	P36004	724 aa		3.17	□□□□□ -1.9
SWD2	YKL018W	DOA1	P36037	715 aa		3.17	□□□□□ -1.9
SWD2	YKL018W	DED81	P38707	554 aa	Known RBP	3.17	□□□□□ -1.9
SWD2	YKL018W	YHR177W	P38867	453 aa		3.17	□□□□□ -1.9
SWD2	YKL018W	VPS45	P38932	577 aa		3.17	□□□□□ -1.9
SWD2	YKL018W	ALD5	P40047	520 aa	Known RBP	3.17	□□□□□ -1.9
SWD2	YKL018W	SNL1	P40548	159 aa		3.17	□□□□□ -1.9
SWD2	YKL018W	WSC2	P53832	503 aa		3.17	□□□□□ -1.9
SWD2	YKL018W	ARK1	P53974	638 aa		3.17	□□□□□ -1.9
SWD2	YKL018W	URC2	Q04411	772 aa		3.17	□□□□□ -1.9
SWD2	YKL018W	GGA1	Q06336	557 aa		3.17	□□□□□ -1.9
SWD2	YKL018W	RMD5	Q12508	421 aa		3.17	□□□□□ -1.9
SWD2	YKL018W	MDS3	P53094	1487 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	RPL12A	P0CX53	165 aa	Known RBP	3.16	□□□□□ -1.9
SWD2	YKL018W	RPL12B	P0CX54	165 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	MAS1	P10507	462 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	PUT4	P15380	627 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	OM45	P16547	393 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	YKL097C	P34245	136 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	PCH2	P38126	564 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	YDR089W	P38966	869 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	MST28	P39552	234 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	ATM1	P40416	690 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	LSB1	P53281	241 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	YGR266W	P53326	701 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	PRO2	P54885	456 aa	Known RBP	3.16	□□□□□ -1.9
SWD2	YKL018W	ADD37	Q03233	198 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	INP2	Q03824	705 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	YMR310C	Q04867	317 aa	Predicted RBP	3.16	□□□□□ -1.9
SWD2	YKL018W	ASA1	Q06822	443 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	GLE1	Q12315	538 aa		3.16	□□□□□ -1.9
SWD2	YKL018W	TPK3	P05986	398 aa		3.15	□□□□□ -1.91
SWD2	YKL018W	ATP1	P07251	545 aa	Known RBP	3.15	□□□□□ -1.91
SWD2	YKL018W	ARF1	P11076	181 aa	Known RBP	3.15	□□□□□ -1.91
SWD2	YKL018W	THR4	P16120	514 aa	Known RBP	3.15	□□□□□ -1.91
SWD2	YKL018W	SAG1	P20840	650 aa		3.15	□□□□□ -1.91
SWD2	YKL018W	GRR1	P24814	1151 aa		3.15	□□□□□ -1.91
SWD2	YKL018W	EFB1	P32471	206 aa	Known RBP	3.15	□□□□□ -1.91
SWD2	YKL018W	YKT6	P36015	200 aa	Known RBP	3.15	□□□□□ -1.91
SWD2	YKL018W	SMC2	P38989	1170 aa	Known RBP	3.15	□□□□□ -1.91
SWD2	YKL018W	AIM10	P39965	576 aa	Known RBP	3.15	□□□□□ -1.91
SWD2	YKL018W	UTP18	P40362	594 aa	Predicted RBP	3.15	□□□□□ -1.91
SWD2	YKL018W	RRT5	P43607	289 aa		3.15	□□□□□ -1.91
SWD2	YKL018W	PMT5	P52867	743 aa		3.15	□□□□□ -1.91
SWD2	YKL018W	EFM5	P53200	248 aa	Known RBP	3.15	□□□□□ -1.91
SWD2	YKL018W	CAF40	P53829	373 aa		3.15	□□□□□ -1.91
SWD2	YKL018W	GIM3	P53900	129 aa		3.15	□□□□□ -1.91
SWD2	YKL018W	YOR012W	Q12351	137 aa		3.15	□□□□□ -1.91
SWD2	YKL018W	NCA2	Q12374	616 aa		3.15	□□□□□ -1.91
SWD2	YKL018W	ADF1	Q2V2Q1	113 aa		3.15	□□□□□ -1.91
SWD2	YKL018W	CPR1	P14832	162 aa	Known RBP	3.14	□□□□□ -1.91
SWD2	YKL018W	SLY1	P22213	666 aa		3.14	□□□□□ -1.91
SWD2	YKL018W	PUT3	P25502	979 aa	Predicted RBP	3.14	□□□□□ -1.91
SWD2	YKL018W	LDB16	P25587	256 aa		3.14	□□□□□ -1.91
SWD2	YKL018W	ITR1	P30605	584 aa		3.14	□□□□□ -1.91
SWD2	YKL018W	MSK1	P32048	576 aa		3.14	□□□□□ -1.91
SWD2	YKL018W	HMX1	P32339	317 aa		3.14	□□□□□ -1.91
SWD2	YKL018W	ASF2	P32448	525 aa	Predicted RBP	3.14	□□□□□ -1.91
SWD2	YKL018W	KRE6	P32486	720 aa		3.14	□□□□□ -1.91
SWD2	YKL018W	MRP4	P32902	394 aa		3.14	□□□□□ -1.91
SWD2	YKL018W	RIB5	P38145	238 aa		3.14	□□□□□ -1.91
SWD2	YKL018W	STE24	P47154	453 aa		3.14	□□□□□ -1.91
SWD2	YKL018W	TRF5	P48561	642 aa	Known RBP	3.14	□□□□□ -1.91
SWD2	YKL018W	AZR1	P50080	613 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms