RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W RPB5P20434 215 aa10.53□□□□□ -0.72
SIM1YIL123W RNQ1P25367 405 aa10.53□□□□□ -0.72
SIM1YIL123W ARE1P25628 610 aa10.53□□□□□ -0.72
SIM1YIL123W ASF2P32448 525 aaPredicted RBP10.53□□□□□ -0.72
SIM1YIL123W TPO5P36029 618 aa10.53□□□□□ -0.72
SIM1YIL123W ARN2P38724 620 aa10.53□□□□□ -0.72
SIM1YIL123W ALR2P43553 858 aa10.53□□□□□ -0.72
SIM1YIL123W RET2P43621 546 aa10.53□□□□□ -0.72
SIM1YIL123W EFM3P47163 339 aa10.53□□□□□ -0.72
SIM1YIL123W ATF2P53296 535 aa10.53□□□□□ -0.72
SIM1YIL123W RRP12Q12754 1228 aaKnown RBP10.53□□□□□ -0.72
SIM1YIL123W SAM35P14693 329 aa10.52□□□□□ -0.73
SIM1YIL123W PRP2P20095 876 aaPredicted RBP10.52□□□□□ -0.73
SIM1YIL123W BUD5P25300 642 aaPredicted RBP10.52□□□□□ -0.73
SIM1YIL123W YJU2P28320 278 aaPredicted RBP10.52□□□□□ -0.73
SIM1YIL123W PRO1P32264 428 aa10.52□□□□□ -0.73
SIM1YIL123W SRB5P32585 307 aa10.52□□□□□ -0.73
SIM1YIL123W TED1P40533 473 aa10.52□□□□□ -0.73
SIM1YIL123W RPL10P41805 221 aaKnown RBP10.52□□□□□ -0.73
SIM1YIL123W NEJ1Q06148 342 aa10.52□□□□□ -0.73
SIM1YIL123W FDH1Q08911 376 aa10.52□□□□□ -0.73
SIM1YIL123W LEU9Q12166 604 aaKnown RBP10.52□□□□□ -0.73
SIM1YIL123W PNS1Q12412 539 aa10.52□□□□□ -0.73
SIM1YIL123W HCM1P25364 564 aa10.51□□□□□ -0.73
SIM1YIL123W PRP19P32523 503 aaKnown RBP10.51□□□□□ -0.73
SIM1YIL123W YRO2P38079 344 aa10.51□□□□□ -0.73
SIM1YIL123W BAP2P38084 609 aa10.51□□□□□ -0.73
SIM1YIL123W YBR139WP38109 508 aa10.51□□□□□ -0.73
SIM1YIL123W MNL1P38888 796 aa10.51□□□□□ -0.73
SIM1YIL123W TAT2P38967 592 aa10.51□□□□□ -0.73
SIM1YIL123W DDI1P40087 428 aa10.51□□□□□ -0.73
SIM1YIL123W CIS3P47001 227 aa10.51□□□□□ -0.73
SIM1YIL123W IMD4P50094 524 aaKnown RBP10.51□□□□□ -0.73
SIM1YIL123W NQM1P53228 333 aaPredicted RBP10.51□□□□□ -0.73
SIM1YIL123W MTQ1P53944 314 aa10.51□□□□□ -0.73
SIM1YIL123W GSH2Q08220 491 aa10.51□□□□□ -0.73
SIM1YIL123W SIA1Q12212 622 aa10.51□□□□□ -0.73
SIM1YIL123W BMT6Q12291 365 aa10.51□□□□□ -0.73
SIM1YIL123W THR1P17423 357 aaKnown RBP10.5□□□□□ -0.73
SIM1YIL123W IDP1P21954 428 aaKnown RBP10.5□□□□□ -0.73
SIM1YIL123W TAH1P25638 111 aaPredicted RBP10.5□□□□□ -0.73
SIM1YIL123W HIR2P32480 875 aa10.5□□□□□ -0.73
SIM1YIL123W SBE22P38814 852 aa10.5□□□□□ -0.73
SIM1YIL123W HMS2P47175 358 aa10.5□□□□□ -0.73
SIM1YIL123W NUP57P48837 541 aa10.5□□□□□ -0.73
SIM1YIL123W MPC1P53157 130 aaKnown RBP10.5□□□□□ -0.73
SIM1YIL123W REC102Q02721 264 aa10.5□□□□□ -0.73
SIM1YIL123W ELP4Q02884 456 aaKnown RBP10.5□□□□□ -0.73
SIM1YIL123W YLR446WQ06204 433 aa10.5□□□□□ -0.73
SIM1YIL123W VPS36Q06696 566 aa10.5□□□□□ -0.73
SIM1YIL123W YDR262WQ12331 272 aa10.5□□□□□ -0.73
SIM1YIL123W YOL163WP0CF20 169 aa10.5□□□□□ -0.73
SIM1YIL123W YMC1P32331 307 aa10.5□□□□□ -0.73
SIM1YIL123W OAC1P32332 324 aa10.5□□□□□ -0.73
SIM1YIL123W NPL6P32832 435 aa10.5□□□□□ -0.73
SIM1YIL123W FES1P38260 290 aa10.5□□□□□ -0.73
SIM1YIL123W NTA1P40354 457 aa10.5□□□□□ -0.73
SIM1YIL123W CHA4P43634 648 aa10.5□□□□□ -0.73
SIM1YIL123W RPS12P48589 143 aaKnown RBP10.5□□□□□ -0.73
SIM1YIL123W NUP49Q02199 472 aa10.5□□□□□ -0.73
SIM1YIL123W ABZ2Q03266 374 aa10.5□□□□□ -0.73
SIM1YIL123W GPI17Q04080 534 aa10.5□□□□□ -0.73
SIM1YIL123W RRN11Q04712 507 aa10.5□□□□□ -0.73
SIM1YIL123W YOR019WQ99248 730 aa10.5□□□□□ -0.73
SIM1YIL123W CBS1P14066 229 aa10.49□□□□□ -0.73
SIM1YIL123W TRM1P15565 570 aaKnown RBP10.49□□□□□ -0.73
SIM1YIL123W MSN2P33748 704 aa10.49□□□□□ -0.73
SIM1YIL123W FMP23P38231 175 aa10.49□□□□□ -0.73
SIM1YIL123W HOC1P47124 396 aa10.49□□□□□ -0.73
SIM1YIL123W JHD2P47156 728 aaPredicted RBP10.49□□□□□ -0.73
SIM1YIL123W AAD10P47182 288 aa10.49□□□□□ -0.73
SIM1YIL123W EXG2P52911 562 aa10.49□□□□□ -0.73
SIM1YIL123W MEP3P53390 489 aa10.49□□□□□ -0.73
SIM1YIL123W YNR014WP53719 212 aa10.49□□□□□ -0.73
SIM1YIL123W MDM36Q06820 579 aa10.49□□□□□ -0.73
SIM1YIL123W YEH1Q07804 573 aa10.49□□□□□ -0.73
SIM1YIL123W RBD2Q12270 262 aa10.49□□□□□ -0.73
SIM1YIL123W YMR084WA2P2R3 262 aa10.48□□□□□ -0.73
SIM1YIL123W DHR2P36009 735 aaPredicted RBP10.48□□□□□ -0.73
SIM1YIL123W PRP39P39682 629 aaKnown RBP10.48□□□□□ -0.73
SIM1YIL123W JLP2P40206 208 aa10.48□□□□□ -0.73
SIM1YIL123W ART5P53244 586 aaKnown RBP10.48□□□□□ -0.73
SIM1YIL123W SYF2P53277 215 aaPredicted RBP10.48□□□□□ -0.73
SIM1YIL123W MRX10Q05648 414 aa10.48□□□□□ -0.73
SIM1YIL123W YPL191CQ08930 360 aa10.48□□□□□ -0.73
SIM1YIL123W MOD5P07884 428 aa10.47□□□□□ -0.73
SIM1YIL123W KGD1P20967 1014 aaKnown RBP10.47□□□□□ -0.73
SIM1YIL123W NRP1P32770 719 aaKnown RBP RIP-Chip data10.47□□□□□ -0.73not detected
SIM1YIL123W SEA4P38164 1038 aa10.47□□□□□ -0.73
SIM1YIL123W PEX18P38855 283 aa10.47□□□□□ -0.73
SIM1YIL123W SSY5P47002 699 aa10.47□□□□□ -0.73
SIM1YIL123W SUN4P53616 420 aa10.47□□□□□ -0.73
SIM1YIL123W CTL1Q03220 320 aaKnown RBP10.47□□□□□ -0.73
SIM1YIL123W GRX3Q03835 250 aa10.47□□□□□ -0.73
SIM1YIL123W NAT4Q04751 285 aa10.47□□□□□ -0.73
SIM1YIL123W SOG2Q08817 791 aa10.47□□□□□ -0.73
SIM1YIL123W MDH1P17505 334 aaKnown RBP RIP-Chip data10.46□□□□□ -0.74not detected
SIM1YIL123W AAC3P18238 307 aa10.46□□□□□ -0.74
SIM1YIL123W YCK1P23291 538 aa10.46□□□□□ -0.74
SIM1YIL123W CDC12P32468 407 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms