RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W HIT1P46973 164 aa1.95□□□□□ -2.1
RTT107YHR154W RET3P53600 189 aa1.95□□□□□ -2.1
RTT107YHR154W YNL260CP53846 198 aa1.95□□□□□ -2.1
RTT107YHR154W PGA2P53903 129 aa1.95□□□□□ -2.1
RTT107YHR154W IMP4P53941 290 aaKnown RBP1.95□□□□□ -2.1
RTT107YHR154W GCN5Q03330 439 aa1.95□□□□□ -2.1
RTT107YHR154W URC2Q04411 772 aa1.95□□□□□ -2.1
RTT107YHR154W COQ11Q05892 277 aa1.95□□□□□ -2.1
RTT107YHR154W SYO1Q07395 620 aa1.95□□□□□ -2.1
RTT107YHR154W YPL272CQ08984 517 aa1.95□□□□□ -2.1
RTT107YHR154W SAM4Q08985 325 aaKnown RBP1.95□□□□□ -2.1
RTT107YHR154W YRA1Q12159 226 aaKnown RBP1.95□□□□□ -2.1
RTT107YHR154W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
RTT107YHR154W LCB4Q12246 624 aa1.95□□□□□ -2.1
RTT107YHR154W HAP2P06774 265 aa1.94□□□□□ -2.1
RTT107YHR154W RPS16AP0CX51 143 aaKnown RBP1.94□□□□□ -2.1
RTT107YHR154W RPS16BP0CX52 143 aaKnown RBP1.94□□□□□ -2.1
RTT107YHR154W PEP5P12868 1029 aa1.94□□□□□ -2.1
RTT107YHR154W STE4P18851 423 aa1.94□□□□□ -2.1
RTT107YHR154W DAL81P21657 970 aa1.94□□□□□ -2.1
RTT107YHR154W YCR006CP25350 157 aa1.94□□□□□ -2.1
RTT107YHR154W YCL068CP25593 260 aa1.94□□□□□ -2.1
RTT107YHR154W ASF2P32448 525 aaPredicted RBP1.94□□□□□ -2.1
RTT107YHR154W MSS1P32559 526 aaPredicted RBP1.94□□□□□ -2.1
RTT107YHR154W CYM1P32898 989 aa1.94□□□□□ -2.1
RTT107YHR154W RPC34P32910 317 aa1.94□□□□□ -2.1
RTT107YHR154W RPT5P33297 434 aaKnown RBP1.94□□□□□ -2.1
RTT107YHR154W YBR053CP38235 358 aa1.94□□□□□ -2.1
RTT107YHR154W PCA1P38360 1216 aa1.94□□□□□ -2.1
RTT107YHR154W ISC1P40015 477 aaKnown RBP1.94□□□□□ -2.1
RTT107YHR154W BAP3P41815 604 aa1.94□□□□□ -2.1
RTT107YHR154W YJL163CP46996 555 aa1.94□□□□□ -2.1
RTT107YHR154W KTR5P53966 522 aaPredicted RBP1.94□□□□□ -2.1
RTT107YHR154W SHR3Q02774 210 aa1.94□□□□□ -2.1
RTT107YHR154W YMR206WQ03695 313 aa1.94□□□□□ -2.1
RTT107YHR154W ERV41Q04651 352 aa1.94□□□□□ -2.1
RTT107YHR154W STE23Q06010 1027 aa1.94□□□□□ -2.1
RTT107YHR154W CTS2Q06350 511 aa1.94□□□□□ -2.1
RTT107YHR154W SHS1Q07657 551 aa1.94□□□□□ -2.1
RTT107YHR154W ETT1Q08421 412 aaKnown RBP1.94□□□□□ -2.1
RTT107YHR154W YLL056CQ12177 298 aa1.94□□□□□ -2.1
RTT107YHR154W NCB2Q92317 146 aa1.94□□□□□ -2.1
RTT107YHR154W MRP1P10662 321 aaKnown RBP1.94□□□□□ -2.1
RTT107YHR154W NHP6BP11633 99 aaKnown RBP1.94□□□□□ -2.1
RTT107YHR154W SEN2P16658 377 aa1.94□□□□□ -2.1
RTT107YHR154W KGD2P19262 463 aaPredicted RBP1.94□□□□□ -2.1
RTT107YHR154W SRP54P20424 541 aaKnown RBP1.94□□□□□ -2.1
RTT107YHR154W MEK1P24719 497 aaPredicted RBP1.94□□□□□ -2.1
RTT107YHR154W PTC6P25646 442 aa1.94□□□□□ -2.1
RTT107YHR154W RPL5P26321 297 aaKnown RBP1.94□□□□□ -2.1
RTT107YHR154W PPA2P28239 310 aa1.94□□□□□ -2.1
RTT107YHR154W ARO4P32449 370 aaKnown RBP1.94□□□□□ -2.1
RTT107YHR154W HXT1P32465 570 aa1.94□□□□□ -2.1
RTT107YHR154W YKR015CP36111 568 aa1.94□□□□□ -2.1
RTT107YHR154W PIM1P36775 1133 aa1.94□□□□□ -2.1
RTT107YHR154W YBR056WP38081 501 aa1.94□□□□□ -2.1
RTT107YHR154W YBR139WP38109 508 aa1.94□□□□□ -2.1
RTT107YHR154W EFM2P38347 419 aa1.94□□□□□ -2.1
RTT107YHR154W INM1P38710 295 aa1.94□□□□□ -2.1
RTT107YHR154W TDA11P38854 504 aa1.94□□□□□ -2.1
RTT107YHR154W SCC4P40090 624 aa1.94□□□□□ -2.1
RTT107YHR154W PAC11P40960 533 aa1.94□□□□□ -2.1
RTT107YHR154W YJL043WP47053 257 aa1.94□□□□□ -2.1
RTT107YHR154W MRPL50P53724 139 aa1.94□□□□□ -2.1
RTT107YHR154W STD1Q02794 444 aa1.94□□□□□ -2.1
RTT107YHR154W MSS11Q03825 758 aa1.94□□□□□ -2.1
RTT107YHR154W APC4Q04601 652 aa1.94□□□□□ -2.1
RTT107YHR154W BOP2Q06150 570 aa1.94□□□□□ -2.1
RTT107YHR154W GGA1Q06336 557 aa1.94□□□□□ -2.1
RTT107YHR154W DNL4Q08387 944 aaPredicted RBP1.94□□□□□ -2.1
RTT107YHR154W ZPS1Q12512 249 aa1.94□□□□□ -2.1
RTT107YHR154W PRP8P33334 2413 aaKnown RBP1.94□□□□□ -2.1
RTT107YHR154W BRR2P32639 2163 aaKnown RBP1.94□□□□□ -2.1
RTT107YHR154W YER145C-AA0A023PYF4 145 aa1.93□□□□□ -2.1
RTT107YHR154W BI2P03873 423 aa1.93□□□□□ -2.1
RTT107YHR154W GPI12P23797 304 aa1.93□□□□□ -2.1
RTT107YHR154W PEX34P25584 144 aa1.93□□□□□ -2.1
RTT107YHR154W PEX2P32800 271 aa1.93□□□□□ -2.1
RTT107YHR154W IMP3P32899 183 aaPredicted RBP1.93□□□□□ -2.1
RTT107YHR154W LST4P34239 828 aa1.93□□□□□ -2.1
RTT107YHR154W KDX1P36005 433 aa1.93□□□□□ -2.1
RTT107YHR154W YKL023WP36103 277 aaKnown RBP1.93□□□□□ -2.1
RTT107YHR154W PPS1P38148 807 aa1.93□□□□□ -2.1
RTT107YHR154W PCL5P38794 229 aa1.93□□□□□ -2.1
RTT107YHR154W CHS7P38843 316 aa1.93□□□□□ -2.1
RTT107YHR154W YHR177WP38867 453 aa1.93□□□□□ -2.1
RTT107YHR154W YHR182WP38870 785 aa1.93□□□□□ -2.1
RTT107YHR154W RAD17P48581 401 aa1.93□□□□□ -2.1
RTT107YHR154W VAC7P53950 1165 aa1.93□□□□□ -2.1
RTT107YHR154W YDR387CQ04162 555 aa1.93□□□□□ -2.1
RTT107YHR154W AIM33Q04516 312 aa1.93□□□□□ -2.1
RTT107YHR154W COX20Q04935 205 aa1.93□□□□□ -2.1
RTT107YHR154W TRM13Q12383 476 aa1.93□□□□□ -2.1
RTT107YHR154W FSH3Q99369 266 aa1.93□□□□□ -2.1
RTT107YHR154W RAD50P12753 1312 aa1.93□□□□□ -2.1
RTT107YHR154W SEC63P14906 663 aa1.93□□□□□ -2.1
RTT107YHR154W RPB8P20436 146 aa1.93□□□□□ -2.1
RTT107YHR154W COX13P32799 129 aa1.93□□□□□ -2.1
RTT107YHR154W SPT10P35208 640 aa1.93□□□□□ -2.1
RTT107YHR154W DOA1P36037 715 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms