RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN12, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN12	YFR052W	RIC1	P40395	1056 aa		4.69	□□□□□ -1.66
RPN12	YFR052W	GAB1	P41733	394 aa		4.69	□□□□□ -1.66
RPN12	YFR052W	CUP9	P41817	306 aa		4.69	□□□□□ -1.66
RPN12	YFR052W	PSA1	P41940	361 aa	Known RBP	4.69	□□□□□ -1.66
RPN12	YFR052W	YGR067C	P53243	804 aa		4.69	□□□□□ -1.66
RPN12	YFR052W	GOR1	P53839	350 aa		4.69	□□□□□ -1.66
RPN12	YFR052W	SNP1	Q00916	300 aa	Predicted RBP	4.69	□□□□□ -1.66
RPN12	YFR052W	YML119W	Q03208	357 aa		4.69	□□□□□ -1.66
RPN12	YFR052W	GMC2	Q06201	188 aa		4.69	□□□□□ -1.66
RPN12	YFR052W	MCH5	Q08777	521 aa		4.69	□□□□□ -1.66
RPN12	YFR052W	TPK2	P06245	380 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	RAP1	P11938	827 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	CBS2	P14905	389 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	YAP1	P19880	650 aa	Known RBP	4.68	□□□□□ -1.66
RPN12	YFR052W	SAN1	P22470	610 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	GPI12	P23797	304 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	CMK1	P27466	446 aa	Known RBP	4.68	□□□□□ -1.66
RPN12	YFR052W	PMT2	P31382	759 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	SSH4	P32343	579 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	NUP2	P32499	720 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	ORC2	P32833	620 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	MSN2	P33748	704 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	YBR139W	P38109	508 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	ROT2	P38138	954 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	FES1	P38260	290 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	ATG14	P38270	344 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	PZF1	P39933	429 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	PHB1	P40961	287 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	TMA22	P47089	198 aa	Predicted RBP	4.68	□□□□□ -1.66
RPN12	YFR052W	OCA1	P50946	238 aa	Predicted RBP	4.68	□□□□□ -1.66
RPN12	YFR052W	TPC1	P53257	314 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	SUR7	P54003	302 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	YDR476C	Q03362	224 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	NUP53	Q03790	475 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	RAD33	Q04231	177 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	MRL1	Q06815	381 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	YLL007C	Q07799	665 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	RAX1	Q08760	435 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	YTM1	Q12024	460 aa	Predicted RBP	4.68	□□□□□ -1.66
RPN12	YFR052W	YRM1	Q12340	786 aa		4.68	□□□□□ -1.66
RPN12	YFR052W	PRP46	Q12417	451 aa	Predicted RBP	4.68	□□□□□ -1.66
RPN12	YFR052W	ATP6	P00854	259 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	CDC9	P04819	755 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	YSF3	P0C074	85 aa	Predicted RBP	4.67	□□□□□ -1.66
RPN12	YFR052W	CDC34	P14682	295 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	RPB5	P20434	215 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	MCK1	P21965	375 aa	Known RBP	4.67	□□□□□ -1.66
RPN12	YFR052W	CTS1	P29029	562 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	LST4	P34239	828 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	OM14	P38325	134 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	TRR2	P38816	342 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	FAD1	P38913	306 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	MTW1	P39731	289 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	JEM1	P40358	645 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	IMA5	P40884	581 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	ALB1	P47019	175 aa	Predicted RBP	4.67	□□□□□ -1.66
RPN12	YFR052W	YJR141W	P47172	347 aa	Predicted RBP	4.67	□□□□□ -1.66
RPN12	YFR052W	ATP22	P50273	684 aa	Predicted RBP	4.67	□□□□□ -1.66
RPN12	YFR052W	SPT20	P50875	604 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	RPM2	Q02773	1202 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	YMR310C	Q04867	317 aa	Predicted RBP	4.67	□□□□□ -1.66
RPN12	YFR052W	DYN3	Q04949	312 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	OSW1	Q08692	278 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	YOR376W	Q08900	122 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	BSC1	Q12140	328 aa		4.67	□□□□□ -1.66
RPN12	YFR052W	THP2	O13539	261 aa	Known RBP	4.66	□□□□□ -1.66
RPN12	YFR052W	RPS13	P05756	151 aa	Known RBP	4.66	□□□□□ -1.66
RPN12	YFR052W	RPL20A	P0CX23	172 aa	Known RBP	4.66	□□□□□ -1.66
RPN12	YFR052W	RPL20B	P0CX24	172 aa	Predicted RBP	4.66	□□□□□ -1.66
RPN12	YFR052W	MKK1	P32490	508 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	LHP1	P33399	275 aa	Known RBP	4.66	□□□□□ -1.66
RPN12	YFR052W	TUL1	P36096	758 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	VPS51	P36116	164 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	BET3	P36149	193 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	SCO2	P38072	301 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	ALG3	P38179	458 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	IST2	P38250	946 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	RCK1	P38622	512 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	YHR177W	P38867	453 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	PTI1	P39927	425 aa	Predicted RBP	4.66	□□□□□ -1.66
RPN12	YFR052W	SER3	P40054	469 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	ARF3	P40994	183 aa	RIP-Chip data	4.66	□□□□□ -1.66	not detected
RPN12	YFR052W	PAC10	P48363	199 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	KEL2	P50090	882 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	VPS73	P53142	486 aa	Known RBP	4.66	□□□□□ -1.66
RPN12	YFR052W	NNF2	P53253	936 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	MPA43	P53583	542 aa	Predicted RBP	4.66	□□□□□ -1.66
RPN12	YFR052W	YMR210W	Q03649	449 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	HSP31	Q04432	237 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	YOL024W	Q08172	172 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	DCI1	Q08558	271 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	FDH1	Q08911	376 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	TMS1	Q12116	473 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	NSL1	Q12143	216 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	YKL033W-A	Q86ZR7	236 aa		4.66	□□□□□ -1.66
RPN12	YFR052W	IPP1	P00817	287 aa	Known RBP	4.65	□□□□□ -1.67
RPN12	YFR052W	AAC3	P18238	307 aa		4.65	□□□□□ -1.67
RPN12	YFR052W	SEC62	P21825	274 aa		4.65	□□□□□ -1.67
RPN12	YFR052W	CSM1	P25651	190 aa		4.65	□□□□□ -1.67
RPN12	YFR052W	NGG1	P32494	702 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms