RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C SMP3Q04174 516 aa3.74□□□□□ -1.81
SPB4YFL002C ARV1Q06541 321 aa3.74□□□□□ -1.81
SPB4YFL002C YLL007CQ07799 665 aa3.74□□□□□ -1.81
SPB4YFL002C TIM18Q08749 192 aa3.74□□□□□ -1.81
SPB4YFL002C TY3A-GQ12173 290 aa3.74□□□□□ -1.81
SPB4YFL002C FMP16Q12497 93 aa3.74□□□□□ -1.81
SPB4YFL002C TY3A-IQ99219 290 aa3.74□□□□□ -1.81
SPB4YFL002C YOR338WQ99326 363 aa3.74□□□□□ -1.81
SPB4YFL002C ITR1P30605 584 aa3.73□□□□□ -1.81
SPB4YFL002C NTG1P31378 399 aa3.73□□□□□ -1.81
SPB4YFL002C MNS1P32906 549 aa3.73□□□□□ -1.81
SPB4YFL002C VAM7P32912 316 aa3.73□□□□□ -1.81
SPB4YFL002C BTT1P40314 149 aaPredicted RBP3.73□□□□□ -1.81
SPB4YFL002C YGL242CP53066 181 aa3.73□□□□□ -1.81
SPB4YFL002C YGR117CP53270 476 aa3.73□□□□□ -1.81
SPB4YFL002C RRN9P53437 365 aa3.73□□□□□ -1.81
SPB4YFL002C YNL260CP53846 198 aa3.73□□□□□ -1.81
SPB4YFL002C ARK1P53974 638 aa3.73□□□□□ -1.81
SPB4YFL002C DNL4Q08387 944 aaPredicted RBP3.73□□□□□ -1.81
SPB4YFL002C RPL42AP0CX27 106 aaKnown RBP3.72□□□□□ -1.81
SPB4YFL002C RPL42BP0CX28 106 aaKnown RBP3.72□□□□□ -1.81
SPB4YFL002C YER190C-BP0CX94 160 aa3.72□□□□□ -1.81
SPB4YFL002C YEL077W-AP0CX95 160 aa3.72□□□□□ -1.81
SPB4YFL002C YGR296C-BP0CX96 160 aa3.72□□□□□ -1.81
SPB4YFL002C YPL283W-BP0CX97 160 aa3.72□□□□□ -1.81
SPB4YFL002C YPR204C-AP0CX98 160 aa3.72□□□□□ -1.81
SPB4YFL002C RSR1P13856 272 aa3.72□□□□□ -1.81
SPB4YFL002C MRPL8P22353 238 aa3.72□□□□□ -1.81
SPB4YFL002C HXT1P32465 570 aa3.72□□□□□ -1.81
SPB4YFL002C ERG1P32476 496 aaKnown RBP3.72□□□□□ -1.81
SPB4YFL002C MRP4P32902 394 aa3.72□□□□□ -1.81
SPB4YFL002C ECT1P33412 323 aa3.72□□□□□ -1.81
SPB4YFL002C LOS1P33418 1100 aaPredicted RBP3.72□□□□□ -1.81
SPB4YFL002C MRPS5P33759 307 aa3.72□□□□□ -1.81
SPB4YFL002C SIP2P34164 415 aaKnown RBP3.72□□□□□ -1.81
SPB4YFL002C RRP3P38712 501 aaKnown RBP3.72□□□□□ -1.81
SPB4YFL002C FET3P38993 636 aa3.72□□□□□ -1.81
SPB4YFL002C SHO1P40073 367 aa3.72□□□□□ -1.81
SPB4YFL002C SIM1P40472 476 aa3.72□□□□□ -1.81
SPB4YFL002C BET4Q00618 327 aa3.72□□□□□ -1.81
SPB4YFL002C BCP1Q06338 283 aa3.72□□□□□ -1.81
SPB4YFL002C YAP7Q08182 245 aa3.72□□□□□ -1.81
SPB4YFL002C APC5Q08683 685 aa3.72□□□□□ -1.81
SPB4YFL002C TPT1Q12272 230 aaKnown RBP3.72□□□□□ -1.81
SPB4YFL002C NCA2Q12374 616 aa3.72□□□□□ -1.81
SPB4YFL002C YOP1Q12402 180 aa3.72□□□□□ -1.81
SPB4YFL002C PGK1P00560 416 aaKnown RBP3.72□□□□□ -1.81
SPB4YFL002C RPL24AP04449 155 aaKnown RBP3.72□□□□□ -1.81
SPB4YFL002C GDH1P07262 454 aaKnown RBP3.72□□□□□ -1.81
SPB4YFL002C ZUO1P32527 433 aaKnown RBP3.72□□□□□ -1.81
SPB4YFL002C GLC7P32598 312 aaKnown RBP3.72□□□□□ -1.81
SPB4YFL002C PEX32P38292 413 aa3.72□□□□□ -1.81
SPB4YFL002C DHH1P39517 506 aaKnown RBP3.72□□□□□ -1.81
SPB4YFL002C SSN8P47821 323 aa3.72□□□□□ -1.81
SPB4YFL002C RPL15BP54780 204 aaPredicted RBP3.72□□□□□ -1.81
SPB4YFL002C SPR6Q01684 191 aa3.72□□□□□ -1.81
SPB4YFL002C NAT4Q04751 285 aa3.72□□□□□ -1.81
SPB4YFL002C YMR254CQ04838 102 aa3.72□□□□□ -1.81
SPB4YFL002C COQ11Q05892 277 aa3.72□□□□□ -1.81
SPB4YFL002C BUR2Q05949 395 aa3.72□□□□□ -1.81
SPB4YFL002C YLR173WQ06247 608 aa3.72□□□□□ -1.81
SPB4YFL002C MUM3Q08750 479 aa3.72□□□□□ -1.81
SPB4YFL002C BNR1P40450 1375 aa3.71□□□□□ -1.82
SPB4YFL002C AIM17P23180 465 aaKnown RBP3.71□□□□□ -1.82
SPB4YFL002C VMA5P31412 392 aaKnown RBP3.71□□□□□ -1.82
SPB4YFL002C SPR1P32603 445 aa3.71□□□□□ -1.82
SPB4YFL002C YMR262WP38430 313 aa3.71□□□□□ -1.82
SPB4YFL002C RCY1P39531 840 aa3.71□□□□□ -1.82
SPB4YFL002C MST28P39552 234 aa3.71□□□□□ -1.82
SPB4YFL002C HAT2P39984 401 aa3.71□□□□□ -1.82
SPB4YFL002C YNL050CP53952 270 aa3.71□□□□□ -1.82
SPB4YFL002C MCR1P36060 302 aaKnown RBP3.7□□□□□ -1.82
SPB4YFL002C SEC9P40357 651 aa3.7□□□□□ -1.82
SPB4YFL002C AZF1P41696 914 aa3.7□□□□□ -1.82
SPB4YFL002C GCN20P43535 752 aaKnown RBP3.7□□□□□ -1.82
SPB4YFL002C POP6P53218 158 aa3.7□□□□□ -1.82
SPB4YFL002C BOP2Q06150 570 aa3.7□□□□□ -1.82
SPB4YFL002C RBD2Q12270 262 aa3.7□□□□□ -1.82
SPB4YFL002C MED4Q12343 284 aa3.7□□□□□ -1.82
SPB4YFL002C YPR1Q12458 312 aa3.7□□□□□ -1.82
SPB4YFL002C PAB1P04147 577 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
SPB4YFL002C PET123P17558 318 aa3.7□□□□□ -1.82
SPB4YFL002C MDM10P18409 493 aa3.7□□□□□ -1.82
SPB4YFL002C UTR1P21373 530 aa3.7□□□□□ -1.82
SPB4YFL002C YCR022CP25620 114 aa3.7□□□□□ -1.82
SPB4YFL002C RPL5P26321 297 aaKnown RBP3.7□□□□□ -1.82
SPB4YFL002C ICL1P28240 557 aaPredicted RBP3.7□□□□□ -1.82
SPB4YFL002C YEF1P32622 495 aa3.7□□□□□ -1.82
SPB4YFL002C MYO3P36006 1272 aa3.7□□□□□ -1.82
SPB4YFL002C CCT4P39078 528 aaKnown RBP3.7□□□□□ -1.82
SPB4YFL002C FAA2P39518 744 aa3.7□□□□□ -1.82
SPB4YFL002C YIR014WP40570 242 aa3.7□□□□□ -1.82
SPB4YFL002C RRT5P43607 289 aa3.7□□□□□ -1.82
SPB4YFL002C AVT4P50944 713 aa3.7□□□□□ -1.82
SPB4YFL002C YGR168CP53293 376 aa3.7□□□□□ -1.82
SPB4YFL002C RVB1Q03940 463 aaKnown RBP3.7□□□□□ -1.82
SPB4YFL002C RRN11Q04712 507 aa3.7□□□□□ -1.82
SPB4YFL002C SHS1Q07657 551 aa3.7□□□□□ -1.82
SPB4YFL002C YOL107WQ12239 342 aa3.7□□□□□ -1.82
SPB4YFL002C POM152P39685 1337 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms