RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C ECM8P38246 354 aa7.29□□□□□ -1.24
PUP3YER094C FES1P38260 290 aa7.29□□□□□ -1.24
PUP3YER094C RPS27BP38711 82 aa7.29□□□□□ -1.24
PUP3YER094C FAA3P39002 694 aa7.29□□□□□ -1.24
PUP3YER094C RCY1P39531 840 aa7.29□□□□□ -1.24
PUP3YER094C SPO73P40031 143 aa7.29□□□□□ -1.24
PUP3YER094C GIP2P40036 548 aa7.29□□□□□ -1.24
PUP3YER094C ROM1P53046 1155 aa7.29□□□□□ -1.24
PUP3YER094C DAM1P53267 343 aa7.29□□□□□ -1.24
PUP3YER094C YGR168CP53293 376 aa7.29□□□□□ -1.24
PUP3YER094C MTQ1P53944 314 aa7.29□□□□□ -1.24
PUP3YER094C TMA20P89886 181 aaPredicted RBP7.29□□□□□ -1.24
PUP3YER094C RSF1Q05043 376 aa7.29□□□□□ -1.24
PUP3YER094C VPS36Q06696 566 aa7.29□□□□□ -1.24
PUP3YER094C MMP1Q12372 583 aa7.29□□□□□ -1.24
PUP3YER094C CBS1P14066 229 aa7.28□□□□□ -1.24
PUP3YER094C THR1P17423 357 aaKnown RBP7.28□□□□□ -1.24
PUP3YER094C MRPS28P21771 286 aa7.28□□□□□ -1.24
PUP3YER094C MCK1P21965 375 aaKnown RBP7.28□□□□□ -1.24
PUP3YER094C VPH2P32341 215 aa7.28□□□□□ -1.24
PUP3YER094C KAP122P32767 1081 aa7.28□□□□□ -1.24
PUP3YER094C SSZ1P38788 538 aaKnown RBP7.28□□□□□ -1.24
PUP3YER094C SNM1P40993 198 aa7.28□□□□□ -1.24
PUP3YER094C SYF2P53277 215 aaPredicted RBP7.28□□□□□ -1.24
PUP3YER094C NAM8Q00539 523 aaKnown RBP7.28□□□□□ -1.24
PUP3YER094C SWP1Q02795 286 aa7.28□□□□□ -1.24
PUP3YER094C SMP3Q04174 516 aa7.28□□□□□ -1.24
PUP3YER094C ATG17Q06410 417 aa7.28□□□□□ -1.24
PUP3YER094C NFI1Q12216 726 aa7.28□□□□□ -1.24
PUP3YER094C RPS21BQ3E754 87 aaKnown RBP7.28□□□□□ -1.24
PUP3YER094C SIR3P06701 978 aa7.27□□□□□ -1.25
PUP3YER094C MOD5P07884 428 aa7.27□□□□□ -1.25
PUP3YER094C DAL82P21705 255 aa7.27□□□□□ -1.25
PUP3YER094C YCK1P23291 538 aa7.27□□□□□ -1.25
PUP3YER094C DCG1P32460 244 aa7.27□□□□□ -1.25
PUP3YER094C YOR062CP36025 268 aa7.27□□□□□ -1.25
PUP3YER094C YBR138CP38277 524 aa7.27□□□□□ -1.25
PUP3YER094C SIC1P38634 284 aa7.27□□□□□ -1.25
PUP3YER094C EGD2P38879 174 aaKnown RBP7.27□□□□□ -1.25
PUP3YER094C MSS2P40990 351 aa7.27□□□□□ -1.25
PUP3YER094C ALR2P43553 858 aa7.27□□□□□ -1.25
PUP3YER094C JHD2P47156 728 aaPredicted RBP7.27□□□□□ -1.25
PUP3YER094C TPC1P53257 314 aa7.27□□□□□ -1.25
PUP3YER094C COG5P53951 403 aa7.27□□□□□ -1.25
PUP3YER094C SNP1Q00916 300 aaPredicted RBP7.27□□□□□ -1.25
PUP3YER094C CTL1Q03220 320 aaKnown RBP7.27□□□□□ -1.25
PUP3YER094C YPR172WQ06608 200 aa7.27□□□□□ -1.25
PUP3YER094C YPR174CQ06616 221 aaPredicted RBP7.27□□□□□ -1.25
PUP3YER094C AI4P03878 556 aa7.26□□□□□ -1.25
PUP3YER094C GAL4P04386 881 aa7.26□□□□□ -1.25
PUP3YER094C TPK3P05986 398 aa7.26□□□□□ -1.25
PUP3YER094C URE2P23202 354 aaKnown RBP7.26□□□□□ -1.25
PUP3YER094C CNA1P23287 553 aa7.26□□□□□ -1.25
PUP3YER094C BUD5P25300 642 aaPredicted RBP7.26□□□□□ -1.25
PUP3YER094C RRP7P25368 297 aaPredicted RBP7.26□□□□□ -1.25
PUP3YER094C ASF2P32448 525 aaPredicted RBP7.26□□□□□ -1.25
PUP3YER094C PRP21P32524 280 aaPredicted RBP7.26□□□□□ -1.25
PUP3YER094C TOD6P34219 525 aa7.26□□□□□ -1.25
PUP3YER094C AHP1P38013 176 aaKnown RBP7.26□□□□□ -1.25
PUP3YER094C APE4P38821 490 aa7.26□□□□□ -1.25
PUP3YER094C YIL152WP40455 235 aa7.26□□□□□ -1.25
PUP3YER094C SPG5P42933 373 aa7.26□□□□□ -1.25
PUP3YER094C ALB1P47019 175 aaPredicted RBP7.26□□□□□ -1.25
PUP3YER094C BIT61P47041 543 aa7.26□□□□□ -1.25
PUP3YER094C APS3P47064 194 aa7.26□□□□□ -1.25
PUP3YER094C YJR141WP47172 347 aaPredicted RBP7.26□□□□□ -1.25
PUP3YER094C NUP57P48837 541 aa7.26□□□□□ -1.25
PUP3YER094C YGR266WP53326 701 aa7.26□□□□□ -1.25
PUP3YER094C RNH70P53331 553 aa7.26□□□□□ -1.25
PUP3YER094C YPL068CQ02749 293 aa7.26□□□□□ -1.25
PUP3YER094C RSN1Q03516 953 aa7.26□□□□□ -1.25
PUP3YER094C TPP1Q03796 238 aa7.26□□□□□ -1.25
PUP3YER094C SMA2Q04658 369 aa7.26□□□□□ -1.25
PUP3YER094C RNH202Q05635 350 aa7.26□□□□□ -1.25
PUP3YER094C YOR365CQ08844 703 aa7.26□□□□□ -1.25
PUP3YER094C GUP2Q08929 609 aa7.26□□□□□ -1.25
PUP3YER094C PIN2Q12057 282 aa7.26□□□□□ -1.25
PUP3YER094C YPL066WQ12194 479 aa7.26□□□□□ -1.25
PUP3YER094C YOR214CQ12282 236 aa7.26□□□□□ -1.25
PUP3YER094C IRA2P19158 3079 aa7.25□□□□□ -1.25
PUP3YER094C RPC40P07703 335 aaKnown RBP7.25□□□□□ -1.25
PUP3YER094C EXO84P38261 753 aa7.25□□□□□ -1.25
PUP3YER094C ECM34P38728 170 aa7.25□□□□□ -1.25
PUP3YER094C OCA5P38738 679 aa7.25□□□□□ -1.25
PUP3YER094C CTF8P38877 133 aa7.25□□□□□ -1.25
PUP3YER094C YHR210CP38893 341 aa7.25□□□□□ -1.25
PUP3YER094C TAT2P38967 592 aa7.25□□□□□ -1.25
PUP3YER094C VPS52P39904 641 aa7.25□□□□□ -1.25
PUP3YER094C PRE6P40303 254 aaKnown RBP7.25□□□□□ -1.25
PUP3YER094C UTP25P40498 721 aaKnown RBP7.25□□□□□ -1.25
PUP3YER094C ICE2P40499 491 aa7.25□□□□□ -1.25
PUP3YER094C TOS2P50078 622 aa7.25□□□□□ -1.25
PUP3YER094C MPC1P53157 130 aaKnown RBP7.25□□□□□ -1.25
PUP3YER094C MEP3P53390 489 aa7.25□□□□□ -1.25
PUP3YER094C SNF12P53628 566 aa7.25□□□□□ -1.25
PUP3YER094C TLG1Q03322 224 aa7.25□□□□□ -1.25
PUP3YER094C YSF3P0C074 85 aaPredicted RBP7.24□□□□□ -1.25
PUP3YER094C YOL163WP0CF20 169 aa7.24□□□□□ -1.25
PUP3YER094C GPI12P23797 304 aa7.24□□□□□ -1.25
PUP3YER094C HBS1P32769 611 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms