RNA–Protein interactions for RNA: YDR041W

RSM10, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM10, Length 612 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM10	YDR041W	KRE28	Q04431	385 aa		4.82	□□□□□ -1.64
RSM10	YDR041W	RTT103	Q05543	409 aa		4.82	□□□□□ -1.64
RSM10	YDR041W	CMS1	Q07897	291 aa	Known RBP	4.82	□□□□□ -1.64
RSM10	YDR041W	YRA1	Q12159	226 aa	Known RBP	4.82	□□□□□ -1.64
RSM10	YDR041W	AI5_BETA	Q9ZZX0	354 aa		4.82	□□□□□ -1.64
RSM10	YDR041W	Q0010	Q9ZZX9	128 aa		4.82	□□□□□ -1.64
RSM10	YDR041W	RAD9	P14737	1309 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	RHO1	P06780	209 aa	Known RBP	4.81	□□□□□ -1.64
RSM10	YDR041W	MRP1	P10662	321 aa	Known RBP	4.81	□□□□□ -1.64
RSM10	YDR041W	STE18	P18852	110 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	PMA2	P19657	947 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	PUT3	P25502	979 aa	Predicted RBP	4.81	□□□□□ -1.64
RSM10	YDR041W	RAD24	P32641	659 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	MNS1	P32906	549 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	DOA1	P36037	715 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	LDB7	P38210	180 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	PFS1	P38872	237 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	CCT2	P39076	527 aa	Known RBP	4.81	□□□□□ -1.64
RSM10	YDR041W	DSE1	P40077	573 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	BTT1	P40314	149 aa	Predicted RBP	4.81	□□□□□ -1.64
RSM10	YDR041W	DSN1	P40568	576 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	SAS2	P40963	338 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	PMT6	P42934	759 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	LSG1	P53145	640 aa	Known RBP	4.81	□□□□□ -1.64
RSM10	YDR041W	KTR5	P53966	522 aa	Predicted RBP	4.81	□□□□□ -1.64
RSM10	YDR041W	GIP3	Q03016	1276 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	SNU56	Q03782	492 aa	Known RBP	4.81	□□□□□ -1.64
RSM10	YDR041W	AIM33	Q04516	312 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	VPS74	Q06385	345 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	SDO1	Q07953	250 aa	Known RBP	4.81	□□□□□ -1.64
RSM10	YDR041W	YLL056C	Q12177	298 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	NCE102	Q12207	173 aa	RIP-Chip data	4.81	□□□□□ -1.64	not detected
RSM10	YDR041W	RNH203	Q12338	110 aa		4.81	□□□□□ -1.64
RSM10	YDR041W	CDC33	P07260	213 aa	Known RBP	4.8	□□□□□ -1.64
RSM10	YDR041W	RPL12A	P0CX53	165 aa	Known RBP	4.8	□□□□□ -1.64
RSM10	YDR041W	RPL12B	P0CX54	165 aa		4.8	□□□□□ -1.64
RSM10	YDR041W	MATALPHA2	P0CY08	210 aa		4.8	□□□□□ -1.64
RSM10	YDR041W	HMLALPHA2	P0CY09	210 aa		4.8	□□□□□ -1.64
RSM10	YDR041W	ARF1	P11076	181 aa	Known RBP	4.8	□□□□□ -1.64
RSM10	YDR041W	MAS2	P11914	482 aa		4.8	□□□□□ -1.64
RSM10	YDR041W	CKA2	P19454	339 aa		4.8	□□□□□ -1.64
RSM10	YDR041W	RPS5	P26783	225 aa	Known RBP	4.8	□□□□□ -1.64
RSM10	YDR041W	VMA6	P32366	345 aa	Known RBP	4.8	□□□□□ -1.64
RSM10	YDR041W	MSN2	P33748	704 aa		4.8	□□□□□ -1.64
RSM10	YDR041W	STP2	P38704	541 aa		4.8	□□□□□ -1.64
RSM10	YDR041W	UBA4	P38820	440 aa		4.8	□□□□□ -1.64
RSM10	YDR041W	SEC72	P39742	193 aa	Known RBP	4.8	□□□□□ -1.64
RSM10	YDR041W	MNN10	P50108	393 aa	Known RBP	4.8	□□□□□ -1.64
RSM10	YDR041W	PYK2	P52489	506 aa	Known RBP	4.8	□□□□□ -1.64
RSM10	YDR041W	YPL068C	Q02749	293 aa		4.8	□□□□□ -1.64
RSM10	YDR041W	FMP30	Q02883	468 aa		4.8	□□□□□ -1.64
RSM10	YDR041W	SMP3	Q04174	516 aa		4.8	□□□□□ -1.64
RSM10	YDR041W	BER1	Q06688	274 aa	Known RBP	4.8	□□□□□ -1.64
RSM10	YDR041W	YOR365C	Q08844	703 aa		4.8	□□□□□ -1.64
RSM10	YDR041W	SAM4	Q08985	325 aa	Known RBP	4.8	□□□□□ -1.64
RSM10	YDR041W	AHA1	Q12449	350 aa	Known RBP	4.8	□□□□□ -1.64
RSM10	YDR041W	RRI1	Q12468	440 aa		4.8	□□□□□ -1.64
RSM10	YDR041W	ADH2	P00331	348 aa	Known RBP	4.79	□□□□□ -1.64
RSM10	YDR041W	YAK1	P14680	807 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	CKI1	P20485	582 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	UTR1	P21373	530 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	APA2	P22108	325 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	TKL1	P23254	680 aa	Known RBP	4.79	□□□□□ -1.64
RSM10	YDR041W	CLB2	P24869	491 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	PRP18	P33411	251 aa	Predicted RBP	4.79	□□□□□ -1.64
RSM10	YDR041W	BIG1	P38813	335 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	MMF1	P40185	145 aa	Known RBP	4.79	□□□□□ -1.64
RSM10	YDR041W	SYG1	P40528	902 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	SAD1	P43589	448 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	TAF6	P53040	516 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	YGR067C	P53243	804 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	MMT1	Q03218	510 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	HRD3	Q05787	833 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	SPO77	Q06134	477 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	ATG26	Q06321	1198 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	BRX1	Q08235	291 aa	Known RBP	4.79	□□□□□ -1.64
RSM10	YDR041W	REX4	Q08237	289 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	ATG34	Q12292	412 aa		4.79	□□□□□ -1.64
RSM10	YDR041W	PPR1	P07272	904 aa	Predicted RBP	4.78	□□□□□ -1.64
RSM10	YDR041W	CHO1	P08456	276 aa		4.78	□□□□□ -1.64
RSM10	YDR041W	CMK2	P22517	447 aa		4.78	□□□□□ -1.64
RSM10	YDR041W	ERG9	P29704	444 aa		4.78	□□□□□ -1.64
RSM10	YDR041W	APE2	P32454	952 aa	Known RBP	4.78	□□□□□ -1.64
RSM10	YDR041W	MAK5	P38112	773 aa	Predicted RBP	4.78	□□□□□ -1.64
RSM10	YDR041W	SUL1	P38359	859 aa		4.78	□□□□□ -1.64
RSM10	YDR041W	YAL037W	P39728	267 aa		4.78	□□□□□ -1.64
RSM10	YDR041W	YEL020C	P39994	560 aa		4.78	□□□□□ -1.64
RSM10	YDR041W	YJR154W	P47181	346 aa		4.78	□□□□□ -1.64
RSM10	YDR041W	SSU72	P53538	206 aa	Predicted RBP	4.78	□□□□□ -1.64
RSM10	YDR041W	YIF1	P53845	314 aa	Known RBP	4.78	□□□□□ -1.64
RSM10	YDR041W	ALG11	P53954	548 aa	Known RBP	4.78	□□□□□ -1.64
RSM10	YDR041W	DIA1	P54005	336 aa		4.78	□□□□□ -1.64
RSM10	YDR041W	NUP116	Q02630	1113 aa		4.78	□□□□□ -1.64
RSM10	YDR041W	THI3	Q07471	609 aa		4.78	□□□□□ -1.64
RSM10	YDR041W	LDS2	Q08218	356 aa		4.78	□□□□□ -1.64
RSM10	YDR041W	MSH5	Q12175	901 aa		4.78	□□□□□ -1.64
RSM10	YDR041W	YLR108C	Q12259	485 aa		4.78	□□□□□ -1.64
RSM10	YDR041W	THP2	O13539	261 aa	Known RBP	4.77	□□□□□ -1.65
RSM10	YDR041W	YPT1	P01123	206 aa	Known RBP	4.77	□□□□□ -1.65
RSM10	YDR041W	OPI3	P05375	206 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms