RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	RHO4	Q00246	291 aa		4.3	□□□□□ -1.72
RPC53	YDL150W	PIR3	Q03180	325 aa		4.3	□□□□□ -1.72
RPC53	YDL150W	RQC1	Q05468	723 aa	Known RBP	4.3	□□□□□ -1.72
RPC53	YDL150W	EFG1	Q3E705	233 aa	Known RBP	4.3	□□□□□ -1.72
RPC53	YDL150W	QCR6	P00127	147 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	RAD1	P06777	1100 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	CMD1	P06787	147 aa	Known RBP	4.29	□□□□□ -1.72
RPC53	YDL150W	YML002W	P0CF17	737 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	FUR1	P18562	216 aa	Known RBP	4.29	□□□□□ -1.72
RPC53	YDL150W	TYR1	P20049	452 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	MGR1	P25573	417 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	ERG3	P32353	365 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	RPN2	P32565	945 aa	Known RBP	4.29	□□□□□ -1.72
RPC53	YDL150W	RAD5	P32849	1169 aa	Predicted RBP	4.29	□□□□□ -1.72
RPC53	YDL150W	SGE1	P33335	543 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	RPC37	P36121	282 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	SPC34	P36131	295 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	YBP1	P38315	674 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	BZZ1	P38822	633 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	AIM18	P38884	321 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	YEL028W	P39989	153 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	EDC3	P39998	551 aa	Known RBP	4.29	□□□□□ -1.72
RPC53	YDL150W	SCC4	P40090	624 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	ATM1	P40416	690 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	FET5	P43561	622 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	YJL132W	P47014	750 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	YJR154W	P47181	346 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	PRP24	P49960	444 aa	Known RBP	4.29	□□□□□ -1.72
RPC53	YDL150W	TRM112	P53738	135 aa	Predicted RBP	4.29	□□□□□ -1.72
RPC53	YDL150W	AAD15	Q08361	143 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	YOR365C	Q08844	703 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	YOR387C	Q08910	206 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	NCE102	Q12207	173 aa	RIP-Chip data	4.29	□□□□□ -1.72	not detected
RPC53	YDL150W	GPM3	Q12326	303 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	YDL007C-A	Q2V2Q0	85 aa		4.29	□□□□□ -1.72
RPC53	YDL150W	PEP4	P07267	405 aa	Known RBP	4.28	□□□□□ -1.72
RPC53	YDL150W	CBF1	P17106	351 aa		4.28	□□□□□ -1.72
RPC53	YDL150W	FPR1	P20081	114 aa	Known RBP	4.28	□□□□□ -1.72
RPC53	YDL150W	PRP2	P20095	876 aa	Predicted RBP	4.28	□□□□□ -1.72
RPC53	YDL150W	TPS2	P31688	896 aa	Known RBP	4.28	□□□□□ -1.72
RPC53	YDL150W	LTV1	P34078	463 aa		4.28	□□□□□ -1.72
RPC53	YDL150W	CCT2	P39076	527 aa	Known RBP	4.28	□□□□□ -1.72
RPC53	YDL150W	HXT14	P42833	540 aa		4.28	□□□□□ -1.72
RPC53	YDL150W	TCB2	P48231	1178 aa		4.28	□□□□□ -1.72
RPC53	YDL150W	TRF5	P48561	642 aa	Known RBP	4.28	□□□□□ -1.72
RPC53	YDL150W	YPL014W	Q02606	381 aa		4.28	□□□□□ -1.72
RPC53	YDL150W	MSS11	Q03825	758 aa		4.28	□□□□□ -1.72
RPC53	YDL150W	YDR415C	Q04033	374 aa	Predicted RBP	4.28	□□□□□ -1.72
RPC53	YDL150W	RPC11	Q04307	110 aa	Predicted RBP	4.28	□□□□□ -1.72
RPC53	YDL150W	GRX8	Q05926	109 aa		4.28	□□□□□ -1.72
RPC53	YDL150W	THP1	Q08231	455 aa		4.28	□□□□□ -1.72
RPC53	YDL150W	ARG4	P04076	463 aa	Predicted RBP	4.27	□□□□□ -1.73
RPC53	YDL150W	CLB3	P24870	427 aa		4.27	□□□□□ -1.73
RPC53	YDL150W	TFB1	P32776	642 aa		4.27	□□□□□ -1.73
RPC53	YDL150W	YNK1	P36010	153 aa	Known RBP	4.27	□□□□□ -1.73
RPC53	YDL150W	KAP104	P38217	918 aa	Known RBP	4.27	□□□□□ -1.73
RPC53	YDL150W	ATG12	P38316	186 aa		4.27	□□□□□ -1.73
RPC53	YDL150W	OSW5	P40219	148 aa		4.27	□□□□□ -1.73
RPC53	YDL150W	AXL1	P40851	1208 aa		4.27	□□□□□ -1.73
RPC53	YDL150W	AIM22	P47051	409 aa		4.27	□□□□□ -1.73
RPC53	YDL150W	TIM13	P53299	105 aa		4.27	□□□□□ -1.73
RPC53	YDL150W	INP2	Q03824	705 aa		4.27	□□□□□ -1.73
RPC53	YDL150W	SWC7	Q06707	132 aa		4.27	□□□□□ -1.73
RPC53	YDL150W	YKL068W-A	Q3E826	78 aa		4.27	□□□□□ -1.73
RPC53	YDL150W	AFI1	Q99222	893 aa		4.27	□□□□□ -1.73
RPC53	YDL150W	RPL31B	P0C2H9	113 aa	Known RBP	4.26	□□□□□ -1.73
RPC53	YDL150W	IMA3	P0CW40	589 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	IMA4	P0CW41	589 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	ELO2	P25358	347 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	URA7	P28274	579 aa	Known RBP	4.26	□□□□□ -1.73
RPC53	YDL150W	NDI1	P32340	513 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	VPS17	P32913	551 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	UTH1	P36135	365 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	MRPL40	P36534	297 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	BNA4	P38169	460 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	SMF2	P38778	549 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	ERG10	P41338	398 aa	Known RBP	4.26	□□□□□ -1.73
RPC53	YDL150W	ATG27	P46989	271 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	ASN2	P49090	572 aa	Known RBP	4.26	□□□□□ -1.73
RPC53	YDL150W	KTR5	P53966	522 aa	Predicted RBP	4.26	□□□□□ -1.73
RPC53	YDL150W	ENT5	Q03769	411 aa	Known RBP	4.26	□□□□□ -1.73
RPC53	YDL150W	YMR027W	Q04371	470 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	RTN1	Q04947	295 aa	Known RBP	4.26	□□□□□ -1.73
RPC53	YDL150W	GLO2	Q05584	274 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	STE23	Q06010	1027 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	DIC1	Q06143	298 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	YEH2	Q07950	538 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	IMA2	Q08295	589 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	RUD3	Q12234	484 aa	Known RBP	4.26	□□□□□ -1.73
RPC53	YDL150W	LDB17	Q12342	491 aa		4.26	□□□□□ -1.73
RPC53	YDL150W	COX5A	P00424	153 aa		4.25	□□□□□ -1.73
RPC53	YDL150W	TEF1	P02994	458 aa	Known RBP	4.25	□□□□□ -1.73
RPC53	YDL150W	REV1	P12689	985 aa		4.25	□□□□□ -1.73
RPC53	YDL150W	HEM15	P16622	393 aa		4.25	□□□□□ -1.73
RPC53	YDL150W	HNM1	P19807	563 aa		4.25	□□□□□ -1.73
RPC53	YDL150W	MRPL25	P23369	157 aa		4.25	□□□□□ -1.73
RPC53	YDL150W	PMT1	P33775	817 aa		4.25	□□□□□ -1.73
RPC53	YDL150W	PEX5	P35056	612 aa		4.25	□□□□□ -1.73
RPC53	YDL150W	SRX1	P36077	127 aa		4.25	□□□□□ -1.73
RPC53	YDL150W	TCM62	P38228	572 aa	Known RBP	4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms