RNA–Protein interactions for RNA: YBR293W

VBA2, Transcript of Permease of basic amino acids in the vacuolar membrane, yeast

Gene VBA2, Length 1,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VBA2	YBR293W	YER010C	P40011	234 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	MGS1	P40151	587 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	YIL024C	P40543	189 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	LCB2	P40970	561 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	ALY2	P47029	1046 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	VPS62	P53285	467 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	MAL12	P53341	584 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	HCH1	P53834	153 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	PEX13	P80667	386 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	REG1	Q00816	1014 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	AIM33	Q04516	312 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	SMA2	Q04658	369 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	YLR225C	Q05948	407 aa	Known RBP	4.27	□□□□□ -1.73
VBA2	YBR293W	IRC3	Q06683	689 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	SCP1	Q08873	200 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	GUP2	Q08929	609 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	HFI1	Q12060	488 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	SPC3	Q12133	184 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	LCB4	Q12246	624 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	PNS1	Q12412	539 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	TMA17	Q12513	150 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	ECM3	Q99252	613 aa		4.27	□□□□□ -1.73
VBA2	YBR293W	CYC1	P00044	109 aa	Predicted RBP	4.26	□□□□□ -1.73
VBA2	YBR293W	PHO5	P00635	467 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	PMA1	P05030	918 aa	Known RBP	4.26	□□□□□ -1.73
VBA2	YBR293W	TCP1	P12612	559 aa	Known RBP	4.26	□□□□□ -1.73
VBA2	YBR293W	RNA15	P25299	296 aa	Predicted RBP	4.26	□□□□□ -1.73
VBA2	YBR293W	DAL2	P25335	343 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	BEM1	P29366	551 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	URA10	P30402	227 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	ACB1	P31787	87 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	BCS1	P32839	456 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	LHP1	P33399	275 aa	Known RBP	4.26	□□□□□ -1.73
VBA2	YBR293W	SSS1	P35179	80 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	OAR1	P35731	278 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	YKR051W	P36142	418 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	BET3	P36149	193 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	ROT2	P38138	954 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	YBL029W	P38201	376 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	PRS3	P38689	320 aa	Known RBP	4.26	□□□□□ -1.73
VBA2	YBR293W	RRP3	P38712	501 aa	Known RBP	4.26	□□□□□ -1.73
VBA2	YBR293W	VPS45	P38932	577 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	ERV46	P39727	415 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	TOK1	P40310	691 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	ALG8	P40351	577 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	YIL166C	P40445	542 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	IRC24	P40580	263 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	NSE4	P43124	402 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	GYP8	P43570	497 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	PHO86	P46956	311 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	ADO1	P47143	340 aa	Known RBP	4.26	□□□□□ -1.73
VBA2	YBR293W	AAD10	P47182	288 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	PAC10	P48363	199 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	HSV2	P50079	448 aa	Predicted RBP	4.26	□□□□□ -1.73
VBA2	YBR293W	RRN9	P53437	365 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	SLM2	P53955	656 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	ERV25	P54837	211 aa	Known RBP	4.26	□□□□□ -1.73
VBA2	YBR293W	TOF2	Q02208	771 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	CAC2	Q04199	468 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	YDR109C	Q04585	715 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	HOF1	Q05080	669 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	YLR345W	Q06137	509 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	ECM30	Q06673	1274 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	RRP40	Q08285	240 aa	Known RBP	4.26	□□□□□ -1.73
VBA2	YBR293W	ATX2	Q12067	313 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	NMD4	Q12129	218 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	YOR114W	Q12219	294 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	YLR046C	Q12253	270 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	NYV1	Q12255	253 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	YLR126C	Q12288	251 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	SFM1	Q12314	213 aa		4.26	□□□□□ -1.73
VBA2	YBR293W	KIN28	P06242	306 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	ALG7	P07286	448 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	CHS1	P08004	1131 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	SSA3	P09435	649 aa	Known RBP	4.25	□□□□□ -1.73
VBA2	YBR293W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.25	□□□□□ -1.73
VBA2	YBR293W	TY1A-DR6	P0CX70	440 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	TY1A-ER1	P0CX71	440 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	TY1A-LR2	P0CX72	440 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	TY1A-PL	P0CX73	440 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	TY1A-JR1	P0CX74	440 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	TY1A-LR3	P0CX75	440 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	TY1A-ML2	P0CX76	440 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
VBA2	YBR293W	CKS1	P20486	150 aa	Known RBP	4.25	□□□□□ -1.73
VBA2	YBR293W	MAG1	P22134	296 aa	Known RBP	4.25	□□□□□ -1.73
VBA2	YBR293W	NPR1	P22211	790 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	DBR1	P24309	405 aa	Known RBP	4.25	□□□□□ -1.73
VBA2	YBR293W	MNE1	P24720	663 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	DCC1	P25559	380 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	BUB2	P26448	306 aa	Predicted RBP	4.25	□□□□□ -1.73
VBA2	YBR293W	YUR1	P26725	428 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	SNC1	P31109	117 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	RIM1	P32445	135 aa	Known RBP	4.25	□□□□□ -1.73
VBA2	YBR293W	BEM3	P32873	1128 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	YNK1	P36010	153 aa	Known RBP	4.25	□□□□□ -1.73
VBA2	YBR293W	APL3	P38065	1025 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	FUI1	P38196	639 aa		4.25	□□□□□ -1.73
VBA2	YBR293W	TCM62	P38228	572 aa	Known RBP	4.25	□□□□□ -1.73
VBA2	YBR293W	CKB2	P38930	258 aa		4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms