RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C FIG2P25653 1609 aa5.83□□□□□ -1.48
RGD1YBR260C LEU4P06208 619 aaKnown RBP5.82□□□□□ -1.48
RGD1YBR260C PEP4P07267 405 aaKnown RBP5.82□□□□□ -1.48
RGD1YBR260C UTR1P21373 530 aa5.82□□□□□ -1.48
RGD1YBR260C IDP1P21954 428 aaKnown RBP5.82□□□□□ -1.48
RGD1YBR260C RNA14P25298 677 aaKnown RBP5.82□□□□□ -1.48
RGD1YBR260C GRX1P25373 110 aaKnown RBP5.82□□□□□ -1.48
RGD1YBR260C YPT52P36018 234 aaKnown RBP5.82□□□□□ -1.48
RGD1YBR260C YKL151CP36059 337 aa5.82□□□□□ -1.48
RGD1YBR260C YBR013CP38215 129 aa5.82□□□□□ -1.48
RGD1YBR260C FTH1P38310 465 aa5.82□□□□□ -1.48
RGD1YBR260C SLX8P40072 274 aa5.82□□□□□ -1.48
RGD1YBR260C UTP25P40498 721 aaKnown RBP5.82□□□□□ -1.48
RGD1YBR260C MRX5P47007 382 aa5.82□□□□□ -1.48
RGD1YBR260C NBP35P52920 328 aa5.82□□□□□ -1.48
RGD1YBR260C NCS6P53088 359 aa5.82□□□□□ -1.48
RGD1YBR260C KAP120Q02932 1032 aa5.82□□□□□ -1.48
RGD1YBR260C PLB2Q03674 706 aa5.82□□□□□ -1.48
RGD1YBR260C RIF2Q06208 395 aa5.82□□□□□ -1.48
RGD1YBR260C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
RGD1YBR260C ATX2Q12067 313 aa5.82□□□□□ -1.48
RGD1YBR260C REX3Q12090 404 aa5.82□□□□□ -1.48
RGD1YBR260C YLR049CQ12110 428 aa5.82□□□□□ -1.48
RGD1YBR260C SPC3Q12133 184 aa5.82□□□□□ -1.48
RGD1YBR260C YPL066WQ12194 479 aa5.82□□□□□ -1.48
RGD1YBR260C ERG27Q12452 347 aaKnown RBP5.82□□□□□ -1.48
RGD1YBR260C AI1P03875 834 aa5.82□□□□□ -1.48
RGD1YBR260C ARG80P07249 177 aa5.82□□□□□ -1.48
RGD1YBR260C SRM1P21827 482 aa5.82□□□□□ -1.48
RGD1YBR260C NAR1P23503 491 aaKnown RBP5.82□□□□□ -1.48
RGD1YBR260C YCP4P25349 247 aaKnown RBP5.82□□□□□ -1.48
RGD1YBR260C SGF29P25554 259 aa5.82□□□□□ -1.48
RGD1YBR260C DCC1P25559 380 aa5.82□□□□□ -1.48
RGD1YBR260C PMI40P29952 429 aaKnown RBP5.82□□□□□ -1.48
RGD1YBR260C NTH1P32356 751 aa5.82□□□□□ -1.48
RGD1YBR260C SUI1P32911 108 aaKnown RBP5.82□□□□□ -1.48
RGD1YBR260C TMA19P35691 167 aaKnown RBP5.82□□□□□ -1.48
RGD1YBR260C FRE2P36033 711 aa5.82□□□□□ -1.48
RGD1YBR260C BMT2P38278 337 aa5.82□□□□□ -1.48
RGD1YBR260C RSP5P39940 809 aaKnown RBP5.82□□□□□ -1.48
RGD1YBR260C COS12P53053 380 aa5.82□□□□□ -1.48
RGD1YBR260C ROG1P53118 685 aa5.82□□□□□ -1.48
RGD1YBR260C GTR2P53290 341 aa5.82□□□□□ -1.48
RGD1YBR260C RKM2Q03942 479 aa5.82□□□□□ -1.48
RGD1YBR260C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
RGD1YBR260C YPR014CQ6B0W2 109 aa5.82□□□□□ -1.48
RGD1YBR260C CBP1P07252 654 aa5.81□□□□□ -1.48
RGD1YBR260C CAR2P07991 424 aaKnown RBP5.81□□□□□ -1.48
RGD1YBR260C RPB3P16370 318 aaKnown RBP5.81□□□□□ -1.48
RGD1YBR260C PRE8P23639 250 aa5.81□□□□□ -1.48
RGD1YBR260C EMP24P32803 203 aaKnown RBP5.81□□□□□ -1.48
RGD1YBR260C ALY1P36117 915 aa5.81□□□□□ -1.48
RGD1YBR260C VBA5P36172 582 aa5.81□□□□□ -1.48
RGD1YBR260C FIR1P40020 876 aa5.81□□□□□ -1.48
RGD1YBR260C LAS21P40367 830 aa5.81□□□□□ -1.48
RGD1YBR260C DOT5P40553 215 aa5.81□□□□□ -1.48
RGD1YBR260C YGR201CP42936 225 aa5.81□□□□□ -1.48
RGD1YBR260C RRT5P43607 289 aa5.81□□□□□ -1.48
RGD1YBR260C LSB1P53281 241 aa5.81□□□□□ -1.48
RGD1YBR260C EMI1Q04406 187 aa5.81□□□□□ -1.48
RGD1YBR260C GAS2Q06135 555 aa5.81□□□□□ -1.48
RGD1YBR260C TPO3Q06451 622 aa5.81□□□□□ -1.48
RGD1YBR260C YLR413WQ06689 675 aa5.81□□□□□ -1.48
RGD1YBR260C BUD20Q08004 166 aaPredicted RBP5.81□□□□□ -1.48
RGD1YBR260C AIM39Q08223 395 aa5.81□□□□□ -1.48
RGD1YBR260C PSF3Q12146 194 aa5.81□□□□□ -1.48
RGD1YBR260C YBL029C-AQ3E756 94 aa5.81□□□□□ -1.48
RGD1YBR260C PMD1P32634 1753 aa5.81□□□□□ -1.48
RGD1YBR260C YEL009C-AA0A023PZF2 135 aa5.81□□□□□ -1.48
RGD1YBR260C RPC40P07703 335 aaKnown RBP5.81□□□□□ -1.48
RGD1YBR260C CDC4P07834 779 aa5.81□□□□□ -1.48
RGD1YBR260C MET3P08536 511 aa5.81□□□□□ -1.48
RGD1YBR260C SSA3P09435 649 aaKnown RBP5.81□□□□□ -1.48
RGD1YBR260C GAP1P19145 602 aaPredicted RBP5.81□□□□□ -1.48
RGD1YBR260C RSA4P25382 515 aaKnown RBP5.81□□□□□ -1.48
RGD1YBR260C KRR1P25586 316 aaPredicted RBP5.81□□□□□ -1.48
RGD1YBR260C FAA1P30624 700 aaKnown RBP5.81□□□□□ -1.48
RGD1YBR260C HOM6P31116 359 aaKnown RBP5.81□□□□□ -1.48
RGD1YBR260C GLC3P32775 704 aa5.81□□□□□ -1.48
RGD1YBR260C LIP5P32875 414 aa5.81□□□□□ -1.48
RGD1YBR260C MRP4P32902 394 aa5.81□□□□□ -1.48
RGD1YBR260C AVT5P38176 459 aa5.81□□□□□ -1.48
RGD1YBR260C POP7P38291 140 aa5.81□□□□□ -1.48
RGD1YBR260C ERP2P39704 215 aa5.81□□□□□ -1.48
RGD1YBR260C SPO73P40031 143 aa5.81□□□□□ -1.48
RGD1YBR260C PRE6P40303 254 aaKnown RBP5.81□□□□□ -1.48
RGD1YBR260C FIS1P40515 155 aa5.81□□□□□ -1.48
RGD1YBR260C YIR007WP40566 764 aa5.81□□□□□ -1.48
RGD1YBR260C RPN11P43588 306 aaKnown RBP5.81□□□□□ -1.48
RGD1YBR260C CHA4P43634 648 aa5.81□□□□□ -1.48
RGD1YBR260C YJL132WP47014 750 aa5.81□□□□□ -1.48
RGD1YBR260C YAE1P47118 141 aaPredicted RBP5.81□□□□□ -1.48
RGD1YBR260C PAC10P48363 199 aa5.81□□□□□ -1.48
RGD1YBR260C PKP2P53170 491 aa5.81□□□□□ -1.48
RGD1YBR260C ARG5,6Q01217 863 aa5.81□□□□□ -1.48
RGD1YBR260C LRS4Q04087 347 aaKnown RBP5.81□□□□□ -1.48
RGD1YBR260C YDR124WQ04608 324 aa5.81□□□□□ -1.48
RGD1YBR260C SMA2Q04658 369 aa5.81□□□□□ -1.48
RGD1YBR260C MRI1Q06489 411 aaKnown RBP5.81□□□□□ -1.48
RGD1YBR260C NBP2Q12163 236 aa5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms