RNA–Protein interactions for RNA: YBL048W

RRT1, Transcript of Protein of unknown function, yeastyeast

Gene RRT1, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRT1YBL048W STD1Q02794 444 aa1.72□□□□□ -2.13
RRT1YBL048W YHC1Q05900 231 aaKnown RBP1.72□□□□□ -2.13
RRT1YBL048W FAR10Q06001 478 aa1.72□□□□□ -2.13
RRT1YBL048W HTZ1Q12692 134 aaKnown RBP1.72□□□□□ -2.13
RRT1YBL048W SCH9P11792 824 aaKnown RBP1.71□□□□□ -2.14
RRT1YBL048W RAD5P32849 1169 aaPredicted RBP1.71□□□□□ -2.14
RRT1YBL048W YGP1P38616 354 aaKnown RBP1.71□□□□□ -2.14
RRT1YBL048W VEL1P53058 206 aa1.71□□□□□ -2.14
RRT1YBL048W MMT1Q03218 510 aa1.71□□□□□ -2.14
RRT1YBL048W COG4Q06096 861 aa1.71□□□□□ -2.14
RRT1YBL048W DDC1Q08949 612 aa1.71□□□□□ -2.14
RRT1YBL048W FUS3P16892 353 aaKnown RBP1.7□□□□□ -2.14
RRT1YBL048W CLC1P17891 233 aa1.7□□□□□ -2.14
RRT1YBL048W TOA1P32773 286 aa1.7□□□□□ -2.14
RRT1YBL048W SSC1P0CS90 654 aaKnown RBP1.69□□□□□ -2.14
RRT1YBL048W NTC20P38302 140 aaPredicted RBP1.69□□□□□ -2.14
RRT1YBL048W VID27P40157 782 aa1.69□□□□□ -2.14
RRT1YBL048W PRP38Q00723 242 aaPredicted RBP1.69□□□□□ -2.14
RRT1YBL048W INP2Q03824 705 aa1.69□□□□□ -2.14
RRT1YBL048W YLR177WQ06251 628 aa1.69□□□□□ -2.14
RRT1YBL048W AUS1Q08409 1394 aa1.69□□□□□ -2.14
RRT1YBL048W ADE4P04046 510 aaKnown RBP1.68□□□□□ -2.14
RRT1YBL048W UTP9P38882 575 aaKnown RBP1.68□□□□□ -2.14
RRT1YBL048W SCC4P40090 624 aa1.68□□□□□ -2.14
RRT1YBL048W ARF3P40994 183 aaRIP-Chip data1.68□□□□□ -2.14not detected
RRT1YBL048W VAC7P53950 1165 aa1.68□□□□□ -2.14
RRT1YBL048W YDR115WQ04598 105 aa1.68□□□□□ -2.14
RRT1YBL048W MRX8Q05473 314 aa1.68□□□□□ -2.14
RRT1YBL048W POM152P39685 1337 aa1.67□□□□□ -2.14
RRT1YBL048W PAB1P04147 577 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
RRT1YBL048W EPT1P22140 391 aa1.67□□□□□ -2.14
RRT1YBL048W SDH4P37298 181 aa1.67□□□□□ -2.14
RRT1YBL048W WSC4P38739 605 aa1.67□□□□□ -2.14
RRT1YBL048W YPT35P38815 214 aaKnown RBP1.67□□□□□ -2.14
RRT1YBL048W YGL138CP53122 345 aa1.67□□□□□ -2.14
RRT1YBL048W RRP46P53256 223 aaPredicted RBP1.67□□□□□ -2.14
RRT1YBL048W TIM10P87108 93 aa1.67□□□□□ -2.14
RRT1YBL048W MSC3Q05812 728 aa1.67□□□□□ -2.14
RRT1YBL048W LDB17Q12342 491 aa1.67□□□□□ -2.14
RRT1YBL048W IMP2'P32351 346 aa1.66□□□□□ -2.14
RRT1YBL048W RTS3P53289 263 aa1.66□□□□□ -2.14
RRT1YBL048W SRO7Q12038 1033 aa1.66□□□□□ -2.14
RRT1YBL048W SFM1Q12314 213 aa1.66□□□□□ -2.14
RRT1YBL048W COX3P00420 269 aa1.65□□□□□ -2.15
RRT1YBL048W ATP1P07251 545 aaKnown RBP1.65□□□□□ -2.15
RRT1YBL048W ALG1P16661 449 aa1.65□□□□□ -2.15
RRT1YBL048W RRT13P40042 185 aa1.65□□□□□ -2.15
RRT1YBL048W YIL059CP40520 121 aa1.65□□□□□ -2.15
RRT1YBL048W YJR030CP47101 745 aa1.65□□□□□ -2.15
RRT1YBL048W YGR117CP53270 476 aa1.65□□□□□ -2.15
RRT1YBL048W SKO1Q02100 647 aa1.65□□□□□ -2.15
RRT1YBL048W DIS3Q08162 1001 aaKnown RBP1.65□□□□□ -2.15
RRT1YBL048W YOR376WQ08900 122 aa1.65□□□□□ -2.15
RRT1YBL048W HIF1Q12373 385 aa1.65□□□□□ -2.15
RRT1YBL048W DAL5P15365 543 aa1.64□□□□□ -2.15
RRT1YBL048W SPO23P33757 523 aa1.64□□□□□ -2.15
RRT1YBL048W DBP7P36120 742 aaKnown RBP1.64□□□□□ -2.15
RRT1YBL048W ECM8P38246 354 aa1.64□□□□□ -2.15
RRT1YBL048W SHE3P38272 425 aaKnown RBP1.64□□□□□ -2.15
RRT1YBL048W VTI1Q04338 217 aa1.64□□□□□ -2.15
RRT1YBL048W LDS2Q08218 356 aa1.64□□□□□ -2.15
RRT1YBL048W YOR338WQ99326 363 aa1.64□□□□□ -2.15
RRT1YBL048W RPS18AP0CX55 146 aaKnown RBP1.63□□□□□ -2.15
RRT1YBL048W RPS18BP0CX56 146 aaPredicted RBP1.63□□□□□ -2.15
RRT1YBL048W PPQ1P32945 549 aa1.63□□□□□ -2.15
RRT1YBL048W HEM14P40012 539 aa1.63□□□□□ -2.15
RRT1YBL048W NRM1P53718 249 aa1.63□□□□□ -2.15
RRT1YBL048W REX2P54964 269 aaKnown RBP1.63□□□□□ -2.15
RRT1YBL048W SPR6Q01684 191 aa1.63□□□□□ -2.15
RRT1YBL048W RPN9Q04062 393 aaKnown RBP1.63□□□□□ -2.15
RRT1YBL048W PCL9Q12477 304 aa1.63□□□□□ -2.15
RRT1YBL048W SRV2P17555 526 aaKnown RBP1.62□□□□□ -2.15
RRT1YBL048W CKA2P19454 339 aa1.62□□□□□ -2.15
RRT1YBL048W ROX1P25042 368 aa1.62□□□□□ -2.15
RRT1YBL048W GPX2P38143 162 aa1.62□□□□□ -2.15
RRT1YBL048W ASN2P49090 572 aaKnown RBP1.62□□□□□ -2.15
RRT1YBL048W RMI1Q02685 241 aa1.62□□□□□ -2.15
RRT1YBL048W KAP120Q02932 1032 aa1.62□□□□□ -2.15
RRT1YBL048W MET17P06106 444 aa1.61□□□□□ -2.15
RRT1YBL048W CHA1P25379 360 aaKnown RBP1.61□□□□□ -2.15
RRT1YBL048W SKG6P32900 734 aaPredicted RBP1.61□□□□□ -2.15
RRT1YBL048W TRF5P48561 642 aaKnown RBP1.61□□□□□ -2.15
RRT1YBL048W ASA1Q06822 443 aa1.61□□□□□ -2.15
RRT1YBL048W YOL159C-AQ3E769 90 aa1.61□□□□□ -2.15
RRT1YBL048W DBF4P32325 704 aa1.6□□□□□ -2.15
RRT1YBL048W SPS19P32573 292 aaKnown RBP1.6□□□□□ -2.15
RRT1YBL048W ANP1P32629 500 aa1.6□□□□□ -2.15
RRT1YBL048W YAL067W-AQ8TGK6 75 aa1.6□□□□□ -2.15
RRT1YBL048W CKA1P15790 372 aa1.59□□□□□ -2.15
RRT1YBL048W GFD2P25370 566 aaKnown RBP1.59□□□□□ -2.15
RRT1YBL048W ALK2P32789 676 aaPredicted RBP1.59□□□□□ -2.15
RRT1YBL048W MCR1P36060 302 aaKnown RBP1.59□□□□□ -2.15
RRT1YBL048W ATG12P38316 186 aa1.59□□□□□ -2.15
RRT1YBL048W GPI16P38875 610 aa1.59□□□□□ -2.15
RRT1YBL048W BIO3P50277 480 aa1.59□□□□□ -2.15
RRT1YBL048W HMS1Q12398 434 aa1.59□□□□□ -2.15
RRT1YBL048W BEM2P39960 2167 aaKnown RBP1.58□□□□□ -2.16
RRT1YBL048W RAD23P32628 398 aaKnown RBP1.58□□□□□ -2.16
RRT1YBL048W SAS3P34218 831 aa1.58□□□□□ -2.16
RRT1YBL048W SKT5P34226 696 aa1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms