RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 SST2P11972 698 aaKnown RBP-0.85□□□□□ -2.55
snR38snR38 RAD57P25301 460 aa-0.85□□□□□ -2.55
snR38snR38 TOA1P32773 286 aa-0.85□□□□□ -2.55
snR38snR38 MUM2P38236 366 aa-0.85□□□□□ -2.55
snR38snR38 YMR262WP38430 313 aa-0.85□□□□□ -2.55
snR38snR38 MSR1P38714 643 aa-0.85□□□□□ -2.55
snR38snR38 YHK8P38776 514 aa-0.85□□□□□ -2.55
snR38snR38 NAB3P38996 802 aaKnown RBP RIP-Chip data-0.85□□□□□ -2.55not detected
snR38snR38 ASG7P46993 209 aa-0.85□□□□□ -2.55
snR38snR38 PIB2P53191 635 aa-0.85□□□□□ -2.55
snR38snR38 RNH201P53942 307 aa-0.85□□□□□ -2.55
snR38snR38 TDA1Q03533 586 aa-0.85□□□□□ -2.55
snR38snR38 RCO1Q04779 684 aa-0.85□□□□□ -2.55
snR38snR38 MFB1Q04922 465 aa-0.85□□□□□ -2.55
snR38snR38 DCR2Q05924 578 aa-0.85□□□□□ -2.55
snR38snR38 LUC7Q07508 261 aaPredicted RBP-0.85□□□□□ -2.55
snR38snR38 MRX4Q12467 430 aa-0.85□□□□□ -2.55
snR38snR38 SEC53P07283 254 aaKnown RBP-0.86□□□□□ -2.55
snR38snR38 ARD1P07347 238 aaPredicted RBP-0.86□□□□□ -2.55
snR38snR38 YCL068CP25593 260 aa-0.86□□□□□ -2.55
snR38snR38 TEF4P36008 412 aaKnown RBP-0.86□□□□□ -2.55
snR38snR38 YBR241CP38142 488 aa-0.86□□□□□ -2.55
snR38snR38 MED8P38304 223 aa-0.86□□□□□ -2.55
snR38snR38 SPC72P39723 622 aa-0.86□□□□□ -2.55
snR38snR38 YER188WP40103 239 aa-0.86□□□□□ -2.55
snR38snR38 HMS2P47175 358 aa-0.86□□□□□ -2.55
snR38snR38 AAD10P47182 288 aa-0.86□□□□□ -2.55
snR38snR38 TAN1P53072 289 aaPredicted RBP-0.86□□□□□ -2.55
snR38snR38 PRM1P53835 661 aa-0.86□□□□□ -2.55
snR38snR38 SED5Q01590 340 aa-0.86□□□□□ -2.55
snR38snR38 YLR177WQ06251 628 aa-0.86□□□□□ -2.55
snR38snR38 YDL114WQ07530 308 aa-0.86□□□□□ -2.55
snR38snR38 NBP2Q12163 236 aa-0.86□□□□□ -2.55
snR38snR38 TPT1Q12272 230 aaKnown RBP-0.86□□□□□ -2.55
snR38snR38 PCD1Q12524 340 aa-0.86□□□□□ -2.55
snR38snR38 SGS1P35187 1447 aa-0.87□□□□□ -2.55
snR38snR38 FOB1O13329 566 aa-0.87□□□□□ -2.55
snR38snR38 ADE4P04046 510 aaKnown RBP-0.87□□□□□ -2.55
snR38snR38 ILV5P06168 395 aaKnown RBP-0.87□□□□□ -2.55
snR38snR38 YIH1P25637 258 aa-0.87□□□□□ -2.55
snR38snR38 CNS1P33313 385 aa-0.87□□□□□ -2.55
snR38snR38 YKR015CP36111 568 aa-0.87□□□□□ -2.55
snR38snR38 ECO1P43605 281 aa-0.87□□□□□ -2.55
snR38snR38 SEH1P53011 349 aaKnown RBP-0.87□□□□□ -2.55
snR38snR38 EBS1Q03466 884 aaKnown RBP-0.87□□□□□ -2.55
snR38snR38 SYF1Q04048 859 aaPredicted RBP-0.87□□□□□ -2.55
snR38snR38 HSP31Q04432 237 aa-0.87□□□□□ -2.55
snR38snR38 GTO3Q04806 366 aa-0.87□□□□□ -2.55
snR38snR38 RTC5Q12108 567 aaKnown RBP-0.87□□□□□ -2.55
snR38snR38 HIF1Q12373 385 aa-0.87□□□□□ -2.55
snR38snR38 ORT1Q12375 292 aa-0.87□□□□□ -2.55
snR38snR38 DBF20P32328 564 aa-0.88□□□□□ -2.55
snR38snR38 DPH5P32469 300 aaPredicted RBP-0.88□□□□□ -2.55
snR38snR38 SSE1P32589 693 aaKnown RBP-0.88□□□□□ -2.55
snR38snR38 YKR045CP36138 183 aa-0.88□□□□□ -2.55
snR38snR38 SHC1P39000 512 aa-0.88□□□□□ -2.55
snR38snR38 YER084WP40057 128 aa-0.88□□□□□ -2.55
snR38snR38 ALG5P40350 334 aa-0.88□□□□□ -2.55
snR38snR38 IMD4P50094 524 aaKnown RBP-0.88□□□□□ -2.55
snR38snR38 RTS3P53289 263 aa-0.88□□□□□ -2.55
snR38snR38 MEP3P53390 489 aa-0.88□□□□□ -2.55
snR38snR38 PRP38Q00723 242 aaPredicted RBP-0.88□□□□□ -2.55
snR38snR38 MRX11Q03079 207 aa-0.88□□□□□ -2.55
snR38snR38 CCE1Q03702 353 aa-0.88□□□□□ -2.55
snR38snR38 VPS38Q05919 439 aa-0.88□□□□□ -2.55
snR38snR38 YOL160WQ08321 113 aa-0.88□□□□□ -2.55
snR38snR38 FCY22Q12119 530 aa-0.88□□□□□ -2.55
snR38snR38 RMD5Q12508 421 aa-0.88□□□□□ -2.55
snR38snR38 NUC1P08466 329 aa-0.89□□□□□ -2.55
snR38snR38 HOM3P10869 527 aa-0.89□□□□□ -2.55
snR38snR38 SPO12P17123 173 aa-0.89□□□□□ -2.55
snR38snR38 DAP2P18962 818 aa-0.89□□□□□ -2.55
snR38snR38 PRE8P23639 250 aa-0.89□□□□□ -2.55
snR38snR38 MYO3P36006 1272 aa-0.89□□□□□ -2.55
snR38snR38 YHR054CP38780 354 aa-0.89□□□□□ -2.55
snR38snR38 FCY21P40039 528 aa-0.89□□□□□ -2.55
snR38snR38 CTK3P46963 296 aaPredicted RBP-0.89□□□□□ -2.55
snR38snR38 YNL040WP53960 456 aaPredicted RBP-0.89□□□□□ -2.55
snR38snR38 RMI1Q02685 241 aa-0.89□□□□□ -2.55
snR38snR38 OAZ1Q02803 292 aa-0.89□□□□□ -2.55
snR38snR38 YMR166CQ03829 368 aa-0.89□□□□□ -2.55
snR38snR38 ROY1Q04847 553 aa-0.89□□□□□ -2.55
snR38snR38 DXO1Q06349 442 aa-0.89□□□□□ -2.55
snR38snR38 YOL029CQ08187 201 aa-0.89□□□□□ -2.55
snR38snR38 VPS68Q12016 184 aa-0.89□□□□□ -2.55
snR38snR38 SGT2Q12118 346 aaKnown RBP-0.89□□□□□ -2.55
snR38snR38 MSP1P28737 362 aa-0.9□□□□□ -2.55
snR38snR38 LDS1P31379 325 aa-0.9□□□□□ -2.55
snR38snR38 FUN26P31381 517 aa-0.9□□□□□ -2.55
snR38snR38 YER135CP40082 130 aa-0.9□□□□□ -2.55
snR38snR38 AYR1P40471 297 aa-0.9□□□□□ -2.55
snR38snR38 NAS6P50086 228 aa-0.9□□□□□ -2.55
snR38snR38 RMD9P53140 646 aaKnown RBP-0.9□□□□□ -2.55
snR38snR38 YIF1P53845 314 aaKnown RBP-0.9□□□□□ -2.55
snR38snR38 IPI3P53877 555 aa-0.9□□□□□ -2.55
snR38snR38 COG6P53959 839 aa-0.9□□□□□ -2.55
snR38snR38 YDR222WQ04925 415 aa-0.9□□□□□ -2.55
snR38snR38 SUE1Q06524 206 aa-0.9□□□□□ -2.55
snR38snR38 YDL199CQ12407 687 aa-0.9□□□□□ -2.55
snR38snR38 RHO2P06781 192 aa-0.91□□□□□ -2.56
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms