RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	MUD2	P36084	527 aa	Known RBP	2.37	□□□□□ -2.03
RSA1	YPL193W	BYE1	P36106	594 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	AUR1	P36107	401 aa	Predicted RBP	2.37	□□□□□ -2.03
RSA1	YPL193W	SIF2	P38262	535 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	PCF11	P39081	626 aa	Predicted RBP	2.37	□□□□□ -2.03
RSA1	YPL193W	YER186C	P40101	306 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	FIS1	P40515	155 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	CHS6	P40955	746 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	ARF3	P40994	183 aa	RIP-Chip data	2.37	□□□□□ -2.03	not detected
RSA1	YPL193W	RMD8	P43620	662 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	AVT4	P50944	713 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	MNP1	P53163	194 aa	Predicted RBP	2.37	□□□□□ -2.03
RSA1	YPL193W	CIK1	Q01649	594 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	GRX3	Q03835	250 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	YMR111C	Q04461	462 aa	Predicted RBP	2.37	□□□□□ -2.03
RSA1	YPL193W	SMD2	Q06217	110 aa	Known RBP	2.37	□□□□□ -2.03
RSA1	YPL193W	YLH47	Q06493	454 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	SMC5	Q08204	1093 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	DNL4	Q08387	944 aa	Predicted RBP	2.37	□□□□□ -2.03
RSA1	YPL193W	FMP40	Q08968	688 aa	Predicted RBP	2.37	□□□□□ -2.03
RSA1	YPL193W	RIM20	Q12033	661 aa		2.37	□□□□□ -2.03
RSA1	YPL193W	SGT2	Q12118	346 aa	Known RBP	2.37	□□□□□ -2.03
RSA1	YPL193W	CDC16	P09798	840 aa		2.36	□□□□□ -2.03
RSA1	YPL193W	RNA1	P11745	407 aa	Known RBP	2.36	□□□□□ -2.03
RSA1	YPL193W	CKA1	P15790	372 aa		2.36	□□□□□ -2.03
RSA1	YPL193W	TRX1	P22217	103 aa	Known RBP	2.36	□□□□□ -2.03
RSA1	YPL193W	PAP1	P29468	568 aa	Known RBP	2.36	□□□□□ -2.03
RSA1	YPL193W	GPI10	P30777	616 aa		2.36	□□□□□ -2.03
RSA1	YPL193W	SSE2	P32590	693 aa	Known RBP	2.36	□□□□□ -2.03
RSA1	YPL193W	HCS1	P34243	683 aa		2.36	□□□□□ -2.03
RSA1	YPL193W	VID24	P38263	362 aa		2.36	□□□□□ -2.03
RSA1	YPL193W	GAA1	P39012	614 aa		2.36	□□□□□ -2.03
RSA1	YPL193W	FAU1	P40099	211 aa		2.36	□□□□□ -2.03
RSA1	YPL193W	GPI1	P53306	609 aa		2.36	□□□□□ -2.03
RSA1	YPL193W	ALG11	P53954	548 aa	Known RBP	2.36	□□□□□ -2.03
RSA1	YPL193W	ADA2	Q02336	434 aa		2.36	□□□□□ -2.03
RSA1	YPL193W	CWC21	Q03375	135 aa	Known RBP	2.36	□□□□□ -2.03
RSA1	YPL193W	RAD30	Q04049	632 aa		2.36	□□□□□ -2.03
RSA1	YPL193W	HRI1	Q05905	244 aa	Known RBP	2.36	□□□□□ -2.03
RSA1	YPL193W	YOR365C	Q08844	703 aa		2.36	□□□□□ -2.03
RSA1	YPL193W	YPQ1	Q12010	308 aa		2.36	□□□□□ -2.03
RSA1	YPL193W	SMF3	Q12078	473 aa	Predicted RBP	2.36	□□□□□ -2.03
RSA1	YPL193W	BRR1	Q99177	341 aa	Predicted RBP	2.36	□□□□□ -2.03
RSA1	YPL193W	RAD50	P12753	1312 aa		2.36	□□□□□ -2.03
RSA1	YPL193W	SUC2	P00724	532 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	ARD1	P07347	238 aa	Predicted RBP	2.35	□□□□□ -2.03
RSA1	YPL193W	RPC40	P07703	335 aa	Known RBP	2.35	□□□□□ -2.03
RSA1	YPL193W	FUM1	P08417	488 aa	Known RBP	2.35	□□□□□ -2.03
RSA1	YPL193W	RPL4A	P10664	362 aa	Known RBP	2.35	□□□□□ -2.03
RSA1	YPL193W	MET8	P15807	274 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	REC107	P21651	314 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	PPH22	P23595	377 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	PRR1	P28708	518 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	PUP2	P32379	260 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	IME2	P32581	645 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	TFB1	P32776	642 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	MDL1	P33310	695 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	YBR056W	P38081	501 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	MRX3	P38172	270 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	YHR210C	P38893	341 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	SPT8	P38915	602 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	YPS6	P40583	537 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	ALK1	P43633	760 aa	Known RBP	2.35	□□□□□ -2.03
RSA1	YPL193W	FYV8	P46949	817 aa	Known RBP	2.35	□□□□□ -2.03
RSA1	YPL193W	RPL4B	P49626	362 aa	Known RBP	2.35	□□□□□ -2.03
RSA1	YPL193W	RTT102	P53330	157 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	HST1	P53685	503 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	BNI5	P53890	448 aa	Known RBP	2.35	□□□□□ -2.03
RSA1	YPL193W	YNL146W	P53906	100 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	NCS2	P53923	493 aa	Predicted RBP	2.35	□□□□□ -2.03
RSA1	YPL193W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.35	□□□□□ -2.03	not detected
RSA1	YPL193W	HER2	Q03557	464 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	LUC7	Q07508	261 aa	Predicted RBP	2.35	□□□□□ -2.03
RSA1	YPL193W	IES4	Q08561	116 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	APC5	Q08683	685 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	HUA2	Q12134	243 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	YLR108C	Q12259	485 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	ISA2	Q12425	185 aa		2.35	□□□□□ -2.03
RSA1	YPL193W	GCN4	P03069	281 aa		2.34	□□□□□ -2.03
RSA1	YPL193W	GLK1	P17709	500 aa	Known RBP	2.34	□□□□□ -2.03
RSA1	YPL193W	SPB1	P25582	841 aa	Predicted RBP	2.34	□□□□□ -2.03
RSA1	YPL193W	PEP3	P27801	918 aa		2.34	□□□□□ -2.03
RSA1	YPL193W	CRM1	P30822	1084 aa	Known RBP	2.34	□□□□□ -2.03
RSA1	YPL193W	DPH2	P32461	534 aa		2.34	□□□□□ -2.03
RSA1	YPL193W	MID2	P36027	376 aa		2.34	□□□□□ -2.03
RSA1	YPL193W	WSC4	P38739	605 aa		2.34	□□□□□ -2.03
RSA1	YPL193W	AXL2	P38928	823 aa		2.34	□□□□□ -2.03
RSA1	YPL193W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.34	□□□□□ -2.03	not detected
RSA1	YPL193W	GDI1	P39958	451 aa	Known RBP	2.34	□□□□□ -2.03
RSA1	YPL193W	LSM5	P40089	93 aa	Known RBP	2.34	□□□□□ -2.03
RSA1	YPL193W	PCL7	P40186	285 aa		2.34	□□□□□ -2.03
RSA1	YPL193W	PAN6	P40459	309 aa		2.34	□□□□□ -2.03
RSA1	YPL193W	DPH1	P40487	425 aa	Known RBP	2.34	□□□□□ -2.03
RSA1	YPL193W	SEC28	P40509	296 aa	Known RBP	2.34	□□□□□ -2.03
RSA1	YPL193W	YGR266W	P53326	701 aa		2.34	□□□□□ -2.03
RSA1	YPL193W	OGG1	P53397	376 aa	Predicted RBP	2.34	□□□□□ -2.03
RSA1	YPL193W	EOS1	P53938	366 aa		2.34	□□□□□ -2.03
RSA1	YPL193W	TIM11	P81449	96 aa	Predicted RBP	2.34	□□□□□ -2.03
RSA1	YPL193W	PEX25	Q02969	394 aa		2.34	□□□□□ -2.03
RSA1	YPL193W	SHS1	Q07657	551 aa		2.34	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms