RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C PHO86P46956 311 aa1.25□□□□□ -2.21
NIP100YPL174C YIP5P53108 310 aa1.25□□□□□ -2.21
NIP100YPL174C FLC3P53121 802 aa1.25□□□□□ -2.21
NIP100YPL174C RPA49Q01080 415 aaPredicted RBP1.25□□□□□ -2.21
NIP100YPL174C HOT1Q03213 719 aa1.25□□□□□ -2.21
NIP100YPL174C DON1Q05610 365 aa1.25□□□□□ -2.21
NIP100YPL174C MED2Q12124 431 aa1.25□□□□□ -2.21
NIP100YPL174C YGK3Q12222 375 aaPredicted RBP1.25□□□□□ -2.21
NIP100YPL174C SCEIP03882 235 aa1.24□□□□□ -2.21
NIP100YPL174C CYS4P32582 507 aaKnown RBP1.24□□□□□ -2.21
NIP100YPL174C RAD5P32849 1169 aaPredicted RBP1.24□□□□□ -2.21
NIP100YPL174C IGD1P43598 195 aa1.24□□□□□ -2.21
NIP100YPL174C IRC6P43615 237 aa1.24□□□□□ -2.21
NIP100YPL174C SPR6Q01684 191 aa1.24□□□□□ -2.21
NIP100YPL174C YMR155WQ03795 547 aa1.24□□□□□ -2.21
NIP100YPL174C YET2Q04210 160 aa1.24□□□□□ -2.21
NIP100YPL174C AIM32Q04689 311 aa1.24□□□□□ -2.21
NIP100YPL174C SRL2Q12020 392 aa1.24□□□□□ -2.21
NIP100YPL174C RRI2Q12348 645 aa1.24□□□□□ -2.21
NIP100YPL174C RMD5Q12508 421 aa1.24□□□□□ -2.21
NIP100YPL174C RTP1Q12751 981 aa1.24□□□□□ -2.21
NIP100YPL174C YCR051WP25631 222 aa1.24□□□□□ -2.21
NIP100YPL174C CDC50P25656 391 aa1.24□□□□□ -2.21
NIP100YPL174C POM152P39685 1337 aa1.24□□□□□ -2.21
NIP100YPL174C YAL037WP39728 267 aa1.24□□□□□ -2.21
NIP100YPL174C YFL012WP43580 148 aa1.24□□□□□ -2.21
NIP100YPL174C MST27P53176 234 aa1.24□□□□□ -2.21
NIP100YPL174C SVL3Q03088 825 aaKnown RBP1.24□□□□□ -2.21
NIP100YPL174C YDR131CQ03899 556 aa1.24□□□□□ -2.21
NIP100YPL174C SPC19Q03954 165 aa1.24□□□□□ -2.21
NIP100YPL174C MDM36Q06820 579 aa1.24□□□□□ -2.21
NIP100YPL174C IES4Q08561 116 aa1.24□□□□□ -2.21
NIP100YPL174C ATG34Q12292 412 aa1.24□□□□□ -2.21
NIP100YPL174C ATP1P07251 545 aaKnown RBP1.23□□□□□ -2.21
NIP100YPL174C IMA3P0CW40 589 aa1.23□□□□□ -2.21
NIP100YPL174C IMA4P0CW41 589 aa1.23□□□□□ -2.21
NIP100YPL174C SLX1P38324 304 aa1.23□□□□□ -2.21
NIP100YPL174C RRP9Q06506 573 aaKnown RBP1.23□□□□□ -2.21
NIP100YPL174C IMA2Q08295 589 aa1.23□□□□□ -2.21
NIP100YPL174C RAX1Q08760 435 aa1.23□□□□□ -2.21
NIP100YPL174C YOL159C-AQ3E769 90 aa1.23□□□□□ -2.21
NIP100YPL174C CAP2P13517 287 aa1.23□□□□□ -2.21
NIP100YPL174C EXG1P23776 448 aaKnown RBP1.23□□□□□ -2.21
NIP100YPL174C BAT1P38891 393 aaKnown RBP1.23□□□□□ -2.21
NIP100YPL174C VMA13P41807 478 aaKnown RBP1.23□□□□□ -2.21
NIP100YPL174C AIP1P46680 615 aaKnown RBP1.23□□□□□ -2.21
NIP100YPL174C MDM1Q01846 1127 aa1.23□□□□□ -2.21
NIP100YPL174C PRM7Q12459 698 aa1.23□□□□□ -2.21
NIP100YPL174C SEC63P14906 663 aa1.22□□□□□ -2.21
NIP100YPL174C DPH5P32469 300 aaPredicted RBP1.22□□□□□ -2.21
NIP100YPL174C BYE1P36106 594 aa1.22□□□□□ -2.21
NIP100YPL174C SOL2P37262 315 aa1.22□□□□□ -2.21
NIP100YPL174C OLA1P38219 394 aaKnown RBP1.22□□□□□ -2.21
NIP100YPL174C OM14P38325 134 aa1.22□□□□□ -2.21
NIP100YPL174C TSA2Q04120 196 aa1.22□□□□□ -2.21
NIP100YPL174C ROY1Q04847 553 aa1.22□□□□□ -2.21
NIP100YPL174C CMS1Q07897 291 aaKnown RBP1.22□□□□□ -2.21
NIP100YPL174C YBL111CQ3E7Y5 667 aa1.22□□□□□ -2.21
NIP100YPL174C MTR10Q99189 972 aa1.22□□□□□ -2.21
NIP100YPL174C DBF4P32325 704 aa1.22□□□□□ -2.21
NIP100YPL174C TOS3P43637 560 aa1.22□□□□□ -2.21
NIP100YPL174C ISA2Q12425 185 aa1.22□□□□□ -2.21
NIP100YPL174C YCR024C-BQ3E7Z8 88 aa1.22□□□□□ -2.21
NIP100YPL174C ZRC1P20107 442 aa1.21□□□□□ -2.22
NIP100YPL174C RPB5P20434 215 aa1.21□□□□□ -2.22
NIP100YPL174C DOA1P36037 715 aa1.21□□□□□ -2.22
NIP100YPL174C HEL1P36113 551 aa1.21□□□□□ -2.22
NIP100YPL174C SEO1P39709 593 aa1.21□□□□□ -2.22
NIP100YPL174C YPS5P53057 165 aa1.21□□□□□ -2.22
NIP100YPL174C CWC22P53333 577 aaKnown RBP1.21□□□□□ -2.22
NIP100YPL174C ARX1Q03862 593 aaKnown RBP1.21□□□□□ -2.22
NIP100YPL174C MDM30Q05930 598 aa1.21□□□□□ -2.22
NIP100YPL174C DNL4Q08387 944 aaPredicted RBP1.21□□□□□ -2.22
NIP100YPL174C AEP3Q12089 606 aa1.21□□□□□ -2.22
NIP100YPL174C PCL9Q12477 304 aa1.21□□□□□ -2.22
NIP100YPL174C PRB1P09232 635 aa1.21□□□□□ -2.22
NIP100YPL174C SKN1P33336 771 aa1.21□□□□□ -2.22
NIP100YPL174C ATM1P40416 690 aa1.21□□□□□ -2.22
NIP100YPL174C YGR250CP53316 781 aaKnown RBP1.21□□□□□ -2.22
NIP100YPL174C TDA1Q03533 586 aa1.21□□□□□ -2.22
NIP100YPL174C TPK3P05986 398 aa1.2□□□□□ -2.22
NIP100YPL174C CMK2P22517 447 aa1.2□□□□□ -2.22
NIP100YPL174C RIM1P32445 135 aaKnown RBP1.2□□□□□ -2.22
NIP100YPL174C DPH2P32461 534 aa1.2□□□□□ -2.22
NIP100YPL174C ATG18P43601 500 aa1.2□□□□□ -2.22
NIP100YPL174C VEL1P53058 206 aa1.2□□□□□ -2.22
NIP100YPL174C ACL4Q03771 387 aa1.2□□□□□ -2.22
NIP100YPL174C YDR115WQ04598 105 aa1.2□□□□□ -2.22
NIP100YPL174C SLM4P38247 162 aa1.2□□□□□ -2.22
NIP100YPL174C RFC3P38629 340 aa1.2□□□□□ -2.22
NIP100YPL174C NAB3P38996 802 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
NIP100YPL174C PEX22P39718 180 aa1.2□□□□□ -2.22
NIP100YPL174C CAK1P43568 368 aaPredicted RBP1.2□□□□□ -2.22
NIP100YPL174C TRF5P48561 642 aaKnown RBP1.2□□□□□ -2.22
NIP100YPL174C TPS1Q00764 495 aaKnown RBP1.2□□□□□ -2.22
NIP100YPL174C ERO1Q03103 563 aa1.2□□□□□ -2.22
NIP100YPL174C RKM1Q08961 583 aaPredicted RBP1.2□□□□□ -2.22
NIP100YPL174C HSP104P31539 908 aaKnown RBP1.19□□□□□ -2.22
NIP100YPL174C ERG3P32353 365 aa1.19□□□□□ -2.22
NIP100YPL174C ZUO1P32527 433 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 87.9 ms