RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NFI1	YOR156C	PRP3	Q03338	469 aa	Predicted RBP	4.46	□□□□□ -1.7
NFI1	YOR156C	ESA1	Q08649	445 aa		4.46	□□□□□ -1.7
NFI1	YOR156C	SRN2	Q99176	213 aa		4.46	□□□□□ -1.7
NFI1	YOR156C	OPI3	P05375	206 aa		4.45	□□□□□ -1.7
NFI1	YOR156C	PHO2	P07269	559 aa		4.45	□□□□□ -1.7
NFI1	YOR156C	PHO84	P25297	587 aa	Known RBP	4.45	□□□□□ -1.7
NFI1	YOR156C	CPR4	P25334	318 aa		4.45	□□□□□ -1.7
NFI1	YOR156C	YBR139W	P38109	508 aa		4.45	□□□□□ -1.7
NFI1	YOR156C	GDT1	P38301	280 aa	Predicted RBP	4.45	□□□□□ -1.7
NFI1	YOR156C	TOS3	P43637	560 aa		4.45	□□□□□ -1.7
NFI1	YOR156C	RTT102	P53330	157 aa		4.45	□□□□□ -1.7
NFI1	YOR156C	YTH1	Q06102	208 aa	Predicted RBP	4.45	□□□□□ -1.7
NFI1	YOR156C	SPP381	P38282	291 aa	Predicted RBP	4.44	□□□□□ -1.7
NFI1	YOR156C	YHR177W	P38867	453 aa		4.44	□□□□□ -1.7
NFI1	YOR156C	STE24	P47154	453 aa		4.44	□□□□□ -1.7
NFI1	YOR156C	NCA2	Q12374	616 aa		4.44	□□□□□ -1.7
NFI1	YOR156C	UBA1	P22515	1024 aa	Known RBP	4.44	□□□□□ -1.7
NFI1	YOR156C	YCL068C	P25593	260 aa		4.44	□□□□□ -1.7
NFI1	YOR156C	NAS2	P40555	220 aa		4.44	□□□□□ -1.7
NFI1	YOR156C	ATP22	P50273	684 aa	Predicted RBP	4.44	□□□□□ -1.7
NFI1	YOR156C	DBP9	Q06218	594 aa	Known RBP	4.44	□□□□□ -1.7
NFI1	YOR156C	SFG1	Q12507	346 aa		4.44	□□□□□ -1.7
NFI1	YOR156C	MMF1	P40185	145 aa	Known RBP	4.43	□□□□□ -1.7
NFI1	YOR156C	NCA3	P46955	337 aa		4.43	□□□□□ -1.7
NFI1	YOR156C	CCE1	Q03702	353 aa		4.43	□□□□□ -1.7
NFI1	YOR156C	ERV2	Q12284	196 aa		4.43	□□□□□ -1.7
NFI1	YOR156C	CYC3	P06182	269 aa		4.43	□□□□□ -1.7
NFI1	YOR156C	MUD1	P32605	298 aa	Known RBP	4.43	□□□□□ -1.7
NFI1	YOR156C	ANP1	P32629	500 aa		4.43	□□□□□ -1.7
NFI1	YOR156C	KAP104	P38217	918 aa	Known RBP	4.43	□□□□□ -1.7
NFI1	YOR156C	PRM5	P40476	318 aa		4.43	□□□□□ -1.7
NFI1	YOR156C	MTM1	P53320	366 aa		4.43	□□□□□ -1.7
NFI1	YOR156C	COS1	P53822	381 aa		4.43	□□□□□ -1.7
NFI1	YOR156C	ATP1	P07251	545 aa	Known RBP	4.42	□□□□□ -1.7
NFI1	YOR156C	SCH9	P11792	824 aa	Known RBP	4.42	□□□□□ -1.7
NFI1	YOR156C	ATP3	P38077	311 aa	Known RBP	4.42	□□□□□ -1.7
NFI1	YOR156C	IMP4	P53941	290 aa	Known RBP	4.42	□□□□□ -1.7
NFI1	YOR156C	EXG1	P23776	448 aa	Known RBP	4.41	□□□□□ -1.7
NFI1	YOR156C	PHA2	P32452	334 aa		4.41	□□□□□ -1.7
NFI1	YOR156C	RRP1	P35178	278 aa	Predicted RBP	4.41	□□□□□ -1.7
NFI1	YOR156C	UIP5	P36137	443 aa		4.41	□□□□□ -1.7
NFI1	YOR156C	CHK1	P38147	527 aa		4.41	□□□□□ -1.7
NFI1	YOR156C	BTN2	P53286	410 aa		4.41	□□□□□ -1.7
NFI1	YOR156C	RRN9	P53437	365 aa		4.41	□□□□□ -1.7
NFI1	YOR156C	TSR1	Q07381	788 aa	Known RBP	4.41	□□□□□ -1.7
NFI1	YOR156C	PML1	Q07930	204 aa	Predicted RBP	4.41	□□□□□ -1.7
NFI1	YOR156C	PSY3	Q12318	242 aa		4.41	□□□□□ -1.7
NFI1	YOR156C	CAP2	P13517	287 aa		4.41	□□□□□ -1.7
NFI1	YOR156C	CPR3	P25719	182 aa		4.41	□□□□□ -1.7
NFI1	YOR156C	TOA2	P32774	122 aa		4.41	□□□□□ -1.7
NFI1	YOR156C	WWM1	P43582	211 aa	Known RBP	4.41	□□□□□ -1.7
NFI1	YOR156C	YNR068C	P53754	272 aa		4.41	□□□□□ -1.7
NFI1	YOR156C	UTP6	Q02354	440 aa	Known RBP	4.41	□□□□□ -1.7
NFI1	YOR156C	ELP3	Q02908	557 aa	Known RBP	4.41	□□□□□ -1.7
NFI1	YOR156C	SMA2	Q04658	369 aa		4.41	□□□□□ -1.7
NFI1	YOR156C	RRN11	Q04712	507 aa		4.41	□□□□□ -1.7
NFI1	YOR156C	AAD15	Q08361	143 aa		4.41	□□□□□ -1.7
NFI1	YOR156C	SLM5	P25345	492 aa	Known RBP	4.4	□□□□□ -1.7
NFI1	YOR156C	KRR1	P25586	316 aa	Predicted RBP	4.4	□□□□□ -1.7
NFI1	YOR156C	SDH3	P33421	198 aa		4.4	□□□□□ -1.7
NFI1	YOR156C	SKT5	P34226	696 aa		4.4	□□□□□ -1.7
NFI1	YOR156C	RFS1	P38234	210 aa	Known RBP	4.4	□□□□□ -1.7
NFI1	YOR156C	EFM3	P47163	339 aa		4.4	□□□□□ -1.7
NFI1	YOR156C	PBA1	Q05778	276 aa		4.4	□□□□□ -1.7
NFI1	YOR156C	TLG2	Q08144	397 aa		4.4	□□□□□ -1.7
NFI1	YOR156C	CEX1	Q12453	761 aa		4.4	□□□□□ -1.7
NFI1	YOR156C	TRP1	P00912	224 aa		4.4	□□□□□ -1.71
NFI1	YOR156C	ARF1	P11076	181 aa	Known RBP	4.4	□□□□□ -1.71
NFI1	YOR156C	COX13	P32799	129 aa		4.4	□□□□□ -1.71
NFI1	YOR156C	ATM1	P40416	690 aa		4.4	□□□□□ -1.71
NFI1	YOR156C	FYV8	P46949	817 aa	Known RBP	4.4	□□□□□ -1.71
NFI1	YOR156C	YGR117C	P53270	476 aa		4.4	□□□□□ -1.71
NFI1	YOR156C	YNL143C	P53908	130 aa		4.4	□□□□□ -1.71
NFI1	YOR156C	ASA1	Q06822	443 aa		4.4	□□□□□ -1.71
NFI1	YOR156C	RNA1	P11745	407 aa	Known RBP	4.39	□□□□□ -1.71
NFI1	YOR156C	SPT15	P13393	240 aa	Known RBP	4.39	□□□□□ -1.71
NFI1	YOR156C	PSO2	P30620	661 aa		4.39	□□□□□ -1.71
NFI1	YOR156C	KAR9	P32526	644 aa		4.39	□□□□□ -1.71
NFI1	YOR156C	YEF1	P32622	495 aa		4.39	□□□□□ -1.71
NFI1	YOR156C	LDS2	Q08218	356 aa		4.39	□□□□□ -1.71
NFI1	YOR156C	YOR387C	Q08910	206 aa		4.39	□□□□□ -1.71
NFI1	YOR156C	YRM1	Q12340	786 aa		4.39	□□□□□ -1.71
NFI1	YOR156C	SSC1	P0CS90	654 aa	Known RBP	4.38	□□□□□ -1.71
NFI1	YOR156C	RPS8A	P0CX39	200 aa	Known RBP	4.38	□□□□□ -1.71
NFI1	YOR156C	RPS8B	P0CX40	200 aa	Known RBP	4.38	□□□□□ -1.71
NFI1	YOR156C	RDS1	P25611	832 aa		4.38	□□□□□ -1.71
NFI1	YOR156C	SPR6	Q01684	191 aa		4.38	□□□□□ -1.71
NFI1	YOR156C	YEL043W	P32618	956 aa		4.38	□□□□□ -1.71
NFI1	YOR156C	SBE22	P38814	852 aa		4.38	□□□□□ -1.71
NFI1	YOR156C	HER2	Q03557	464 aa		4.38	□□□□□ -1.71
NFI1	YOR156C	VMA2	P16140	517 aa	Known RBP	4.37	□□□□□ -1.71
NFI1	YOR156C	SMI1	P32566	505 aa		4.37	□□□□□ -1.71
NFI1	YOR156C	YBL059W	P34224	193 aa		4.37	□□□□□ -1.71
NFI1	YOR156C	DOA1	P36037	715 aa		4.37	□□□□□ -1.71
NFI1	YOR156C	REE1	P40893	198 aa		4.37	□□□□□ -1.71
NFI1	YOR156C	MDM36	Q06820	579 aa		4.37	□□□□□ -1.71
NFI1	YOR156C	YOP1	Q12402	180 aa		4.37	□□□□□ -1.71
NFI1	YOR156C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
NFI1	YOR156C	NAM9	P27929	486 aa		4.37	□□□□□ -1.71
NFI1	YOR156C	MSG5	P38590	489 aa		4.37	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms