RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI2YOL117W AIM10P39965 576 aaKnown RBP2.38□□□□□ -2.03
RRI2YOL117W TOS3P43637 560 aa2.38□□□□□ -2.03
RRI2YOL117W MRM2P53123 320 aa2.38□□□□□ -2.03
RRI2YOL117W MTQ1P53944 314 aa2.38□□□□□ -2.03
RRI2YOL117W MMT1Q03218 510 aa2.38□□□□□ -2.03
RRI2YOL117W AIM32Q04689 311 aa2.38□□□□□ -2.03
RRI2YOL117W MDH1P17505 334 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
RRI2YOL117W RPB5P20434 215 aa2.37□□□□□ -2.03
RRI2YOL117W CYS4P32582 507 aaKnown RBP2.37□□□□□ -2.03
RRI2YOL117W BNS1P50084 137 aa2.37□□□□□ -2.03
RRI2YOL117W YGR111WP53265 400 aa2.37□□□□□ -2.03
RRI2YOL117W AEP3Q12089 606 aa2.37□□□□□ -2.03
RRI2YOL117W YGK3Q12222 375 aaPredicted RBP2.37□□□□□ -2.03
RRI2YOL117W MSI1P13712 422 aa2.36□□□□□ -2.03
RRI2YOL117W DBF4P32325 704 aa2.36□□□□□ -2.03
RRI2YOL117W DPH5P32469 300 aaPredicted RBP2.36□□□□□ -2.03
RRI2YOL117W YBR056WP38081 501 aa2.36□□□□□ -2.03
RRI2YOL117W OLA1P38219 394 aaKnown RBP2.36□□□□□ -2.03
RRI2YOL117W YHK8P38776 514 aa2.36□□□□□ -2.03
RRI2YOL117W GPI16P38875 610 aa2.36□□□□□ -2.03
RRI2YOL117W JID1Q12350 301 aa2.36□□□□□ -2.03
RRI2YOL117W NCA2Q12374 616 aa2.36□□□□□ -2.03
RRI2YOL117W ISA2Q12425 185 aa2.36□□□□□ -2.03
RRI2YOL117W HOM3P10869 527 aa2.36□□□□□ -2.03
RRI2YOL117W NAT1P12945 854 aaKnown RBP2.36□□□□□ -2.03
RRI2YOL117W HSP26P15992 214 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
RRI2YOL117W ALG1P16661 449 aa2.36□□□□□ -2.03
RRI2YOL117W PCL1P24867 279 aa2.36□□□□□ -2.03
RRI2YOL117W ANR2P36090 516 aaPredicted RBP2.36□□□□□ -2.03
RRI2YOL117W UTH1P36135 365 aa2.36□□□□□ -2.03
RRI2YOL117W COX14P39103 70 aa2.36□□□□□ -2.03
RRI2YOL117W PTI1P39927 425 aaPredicted RBP2.36□□□□□ -2.03
RRI2YOL117W MIG3P39943 394 aa2.36□□□□□ -2.03
RRI2YOL117W YIL029CP40538 142 aa2.36□□□□□ -2.03
RRI2YOL117W TOS2P50078 622 aa2.36□□□□□ -2.03
RRI2YOL117W YML6P51998 286 aa2.36□□□□□ -2.03
RRI2YOL117W HAL1Q01766 294 aa2.36□□□□□ -2.03
RRI2YOL117W RIF2Q06208 395 aa2.36□□□□□ -2.03
RRI2YOL117W HSP104P31539 908 aaKnown RBP2.35□□□□□ -2.03
RRI2YOL117W RIM1P32445 135 aaKnown RBP2.35□□□□□ -2.03
RRI2YOL117W LTV1P34078 463 aa2.35□□□□□ -2.03
RRI2YOL117W MST27P53176 234 aa2.35□□□□□ -2.03
RRI2YOL117W TDA1Q03533 586 aa2.35□□□□□ -2.03
RRI2YOL117W NDE2Q07500 545 aa2.35□□□□□ -2.03
RRI2YOL117W NSE1Q07913 336 aa2.35□□□□□ -2.03
RRI2YOL117W GPM3Q12326 303 aa2.35□□□□□ -2.03
RRI2YOL117W RNH203Q12338 110 aa2.35□□□□□ -2.03
RRI2YOL117W SSC1P0CS90 654 aaKnown RBP2.34□□□□□ -2.03
RRI2YOL117W YEF1P32622 495 aa2.34□□□□□ -2.03
RRI2YOL117W TOA2P32774 122 aa2.34□□□□□ -2.03
RRI2YOL117W SKN1P33336 771 aa2.34□□□□□ -2.03
RRI2YOL117W ATP3P38077 311 aaKnown RBP2.34□□□□□ -2.03
RRI2YOL117W FAD1P38913 306 aa2.34□□□□□ -2.03
RRI2YOL117W YER079WP40052 210 aaKnown RBP2.34□□□□□ -2.03
RRI2YOL117W BUD27P43573 796 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
RRI2YOL117W STE24P47154 453 aa2.34□□□□□ -2.03
RRI2YOL117W NDL1Q06568 189 aa2.34□□□□□ -2.03
RRI2YOL117W CMS1Q07897 291 aaKnown RBP2.34□□□□□ -2.03
RRI2YOL117W DST1P07273 309 aa2.34□□□□□ -2.04
RRI2YOL117W INM1P38710 295 aa2.34□□□□□ -2.04
RRI2YOL117W BAT1P38891 393 aaKnown RBP2.34□□□□□ -2.04
RRI2YOL117W ATG18P43601 500 aa2.34□□□□□ -2.04
RRI2YOL117W AIM24P47127 394 aa2.34□□□□□ -2.04
RRI2YOL117W RRN9P53437 365 aa2.34□□□□□ -2.04
RRI2YOL117W ADA2Q02336 434 aa2.34□□□□□ -2.04
RRI2YOL117W YMR102CQ03177 834 aa2.34□□□□□ -2.04
RRI2YOL117W PRP3Q03338 469 aaPredicted RBP2.34□□□□□ -2.04
RRI2YOL117W RTN1Q04947 295 aaKnown RBP2.34□□□□□ -2.04
RRI2YOL117W CEX1Q12453 761 aa2.34□□□□□ -2.04
RRI2YOL117W SMC6Q12749 1114 aa2.34□□□□□ -2.04
RRI2YOL117W PAB1P04147 577 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
RRI2YOL117W VMA8P32610 256 aaKnown RBP2.33□□□□□ -2.04
RRI2YOL117W MRP21P38175 177 aa2.33□□□□□ -2.04
RRI2YOL117W RTC2P38279 296 aa2.33□□□□□ -2.04
RRI2YOL117W LCB3P47013 409 aa2.33□□□□□ -2.04
RRI2YOL117W PMT5P52867 743 aa2.33□□□□□ -2.04
RRI2YOL117W YGR117CP53270 476 aa2.33□□□□□ -2.04
RRI2YOL117W NOP6Q07623 225 aaKnown RBP2.33□□□□□ -2.04
RRI2YOL117W SMC5Q08204 1093 aa2.33□□□□□ -2.04
RRI2YOL117W DCI1Q08558 271 aa2.33□□□□□ -2.04
RRI2YOL117W SMF3Q12078 473 aaPredicted RBP2.33□□□□□ -2.04
RRI2YOL117W CDC21P06785 304 aa2.32□□□□□ -2.04
RRI2YOL117W ATP1P07251 545 aaKnown RBP2.32□□□□□ -2.04
RRI2YOL117W RPL12AP0CX53 165 aaKnown RBP2.32□□□□□ -2.04
RRI2YOL117W RPL12BP0CX54 165 aa2.32□□□□□ -2.04
RRI2YOL117W NAM2P11325 894 aa2.32□□□□□ -2.04
RRI2YOL117W EGT2P42835 1041 aa2.32□□□□□ -2.04
RRI2YOL117W CRH1P53301 507 aa2.32□□□□□ -2.04
RRI2YOL117W MFG1Q07684 458 aa2.32□□□□□ -2.04
RRI2YOL117W SPE3Q12074 293 aaKnown RBP2.32□□□□□ -2.04
RRI2YOL117W RPL1AP0CX43 217 aaKnown RBP2.32□□□□□ -2.04
RRI2YOL117W RPL1BP0CX44 217 aaKnown RBP2.32□□□□□ -2.04
RRI2YOL117W PRR1P28708 518 aa2.32□□□□□ -2.04
RRI2YOL117W SPT10P35208 640 aa2.32□□□□□ -2.04
RRI2YOL117W QDR3P38227 689 aa2.32□□□□□ -2.04
RRI2YOL117W SRP72P38688 640 aaKnown RBP2.32□□□□□ -2.04
RRI2YOL117W YFR057WP43625 151 aa2.32□□□□□ -2.04
RRI2YOL117W BIR1P47134 954 aa2.32□□□□□ -2.04
RRI2YOL117W PGU1P47180 361 aa2.32□□□□□ -2.04
RRI2YOL117W PIB2P53191 635 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms