RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C MMF1P40185 145 aaKnown RBP2.16□□□□□ -2.06
RPB11YOL005C GAT2P40209 560 aa2.16□□□□□ -2.06
RPB11YOL005C YJL055WP47044 245 aa2.16□□□□□ -2.06
RPB11YOL005C BRO1P48582 844 aa2.16□□□□□ -2.06
RPB11YOL005C SHE10P53075 577 aa2.16□□□□□ -2.06
RPB11YOL005C SDT1P53078 280 aa2.16□□□□□ -2.06
RPB11YOL005C ROG1P53118 685 aa2.16□□□□□ -2.06
RPB11YOL005C URH1Q04179 340 aa2.16□□□□□ -2.06
RPB11YOL005C SNT309Q06091 175 aaPredicted RBP2.16□□□□□ -2.06
RPB11YOL005C YLR456WQ06199 204 aa2.16□□□□□ -2.06
RPB11YOL005C RRP9Q06506 573 aaKnown RBP2.16□□□□□ -2.06
RPB11YOL005C TPT1Q12272 230 aaKnown RBP2.16□□□□□ -2.06
RPB11YOL005C NCA2Q12374 616 aa2.16□□□□□ -2.06
RPB11YOL005C AHC1Q12433 566 aa2.16□□□□□ -2.06
RPB11YOL005C SUP35P05453 685 aaKnown RBP2.15□□□□□ -2.07
RPB11YOL005C PHO91P27514 894 aa2.15□□□□□ -2.07
RPB11YOL005C COX13P32799 129 aa2.15□□□□□ -2.07
RPB11YOL005C LTV1P34078 463 aa2.15□□□□□ -2.07
RPB11YOL005C INM1P38710 295 aa2.15□□□□□ -2.07
RPB11YOL005C COX14P39103 70 aa2.15□□□□□ -2.07
RPB11YOL005C PRE5P40302 234 aaKnown RBP2.15□□□□□ -2.07
RPB11YOL005C YML6P51998 286 aa2.15□□□□□ -2.07
RPB11YOL005C RRP46P53256 223 aaPredicted RBP2.15□□□□□ -2.07
RPB11YOL005C ALF1P53904 254 aa2.15□□□□□ -2.07
RPB11YOL005C MTQ1P53944 314 aa2.15□□□□□ -2.07
RPB11YOL005C ADD37Q03233 198 aa2.15□□□□□ -2.07
RPB11YOL005C PRP42Q03776 544 aaKnown RBP2.15□□□□□ -2.07
RPB11YOL005C SPE3Q12074 293 aaKnown RBP2.15□□□□□ -2.07
RPB11YOL005C RBD2Q12270 262 aa2.15□□□□□ -2.07
RPB11YOL005C ATP1P07251 545 aaKnown RBP2.14□□□□□ -2.07
RPB11YOL005C SLM5P25345 492 aaKnown RBP2.14□□□□□ -2.07
RPB11YOL005C HSP104P31539 908 aaKnown RBP2.14□□□□□ -2.07
RPB11YOL005C SKN1P33336 771 aa2.14□□□□□ -2.07
RPB11YOL005C SBE22P38814 852 aa2.14□□□□□ -2.07
RPB11YOL005C EFM4P40516 257 aa2.14□□□□□ -2.07
RPB11YOL005C BUD27P43573 796 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
RPB11YOL005C TOS3P43637 560 aa2.14□□□□□ -2.07
RPB11YOL005C LCB3P47013 409 aa2.14□□□□□ -2.07
RPB11YOL005C MDE1P47095 244 aa2.14□□□□□ -2.07
RPB11YOL005C YJR085CP47131 105 aaKnown RBP2.14□□□□□ -2.07
RPB11YOL005C MRM2P53123 320 aa2.14□□□□□ -2.07
RPB11YOL005C RPN9Q04062 393 aaKnown RBP2.14□□□□□ -2.07
RPB11YOL005C IRC25Q07951 179 aa2.14□□□□□ -2.07
RPB11YOL005C UAF30Q08747 228 aa2.14□□□□□ -2.07
RPB11YOL005C PAR32Q12515 295 aaKnown RBP2.14□□□□□ -2.07
RPB11YOL005C SSK2P53599 1579 aa2.14□□□□□ -2.07
RPB11YOL005C ESP1Q03018 1630 aa2.13□□□□□ -2.07
RPB11YOL005C OPI3P05375 206 aa2.13□□□□□ -2.07
RPB11YOL005C ALG1P16661 449 aa2.13□□□□□ -2.07
RPB11YOL005C ISY1P21374 235 aaPredicted RBP2.13□□□□□ -2.07
RPB11YOL005C EXG1P23776 448 aaKnown RBP2.13□□□□□ -2.07
RPB11YOL005C NRP1P32770 719 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
RPB11YOL005C RRP1P35178 278 aaPredicted RBP2.13□□□□□ -2.07
RPB11YOL005C STP2P38704 541 aa2.13□□□□□ -2.07
RPB11YOL005C GPI16P38875 610 aa2.13□□□□□ -2.07
RPB11YOL005C STN1P38960 494 aa2.13□□□□□ -2.07
RPB11YOL005C GDI1P39958 451 aaKnown RBP2.13□□□□□ -2.07
RPB11YOL005C SIM1P40472 476 aa2.13□□□□□ -2.07
RPB11YOL005C CHS6P40955 746 aa2.13□□□□□ -2.07
RPB11YOL005C HAC1P41546 238 aa2.13□□□□□ -2.07
RPB11YOL005C TIS11P47977 285 aa2.13□□□□□ -2.07
RPB11YOL005C TOM22P49334 152 aa2.13□□□□□ -2.07
RPB11YOL005C SPR6Q01684 191 aa2.13□□□□□ -2.07
RPB11YOL005C LIP2Q06005 328 aa2.13□□□□□ -2.07
RPB11YOL005C RAX1Q08760 435 aa2.13□□□□□ -2.07
RPB11YOL005C RUP1Q12242 671 aa2.13□□□□□ -2.07
RPB11YOL005C RPN5Q12250 445 aaKnown RBP2.13□□□□□ -2.07
RPB11YOL005C WTM1Q12363 437 aaKnown RBP2.13□□□□□ -2.07
RPB11YOL005C IZH2Q12442 317 aa2.13□□□□□ -2.07
RPB11YOL005C CHD1P32657 1468 aa2.13□□□□□ -2.07
RPB11YOL005C SCC2Q04002 1493 aa2.13□□□□□ -2.07
RPB11YOL005C DNF1P32660 1571 aa2.12□□□□□ -2.07
RPB11YOL005C CAP2P13517 287 aa2.12□□□□□ -2.07
RPB11YOL005C KAR9P32526 644 aa2.12□□□□□ -2.07
RPB11YOL005C PEX5P35056 612 aa2.12□□□□□ -2.07
RPB11YOL005C QDR3P38227 689 aa2.12□□□□□ -2.07
RPB11YOL005C PFF1P38244 976 aa2.12□□□□□ -2.07
RPB11YOL005C MNL1P38888 796 aa2.12□□□□□ -2.07
RPB11YOL005C AIM10P39965 576 aaKnown RBP2.12□□□□□ -2.07
RPB11YOL005C ATM1P40416 690 aa2.12□□□□□ -2.07
RPB11YOL005C MAM33P40513 266 aa2.12□□□□□ -2.07
RPB11YOL005C YPS6P40583 537 aa2.12□□□□□ -2.07
RPB11YOL005C YFR057WP43625 151 aa2.12□□□□□ -2.07
RPB11YOL005C AIM24P47127 394 aa2.12□□□□□ -2.07
RPB11YOL005C BIR1P47134 954 aa2.12□□□□□ -2.07
RPB11YOL005C SHY1P53266 389 aa2.12□□□□□ -2.07
RPB11YOL005C RIF2Q06208 395 aa2.12□□□□□ -2.07
RPB11YOL005C EAF3Q12432 401 aa2.12□□□□□ -2.07
RPB11YOL005C CEX1Q12453 761 aa2.12□□□□□ -2.07
RPB11YOL005C POM152P39685 1337 aa2.12□□□□□ -2.07
RPB11YOL005C SIN3P22579 1536 aa2.12□□□□□ -2.07
RPB11YOL005C TPK3P05986 398 aa2.11□□□□□ -2.07
RPB11YOL005C PIS1P06197 220 aaKnown RBP2.11□□□□□ -2.07
RPB11YOL005C PCL1P24867 279 aa2.11□□□□□ -2.07
RPB11YOL005C DPH5P32469 300 aaPredicted RBP2.11□□□□□ -2.07
RPB11YOL005C NIP1P32497 812 aaKnown RBP2.11□□□□□ -2.07
RPB11YOL005C YSC83P32792 385 aa2.11□□□□□ -2.07
RPB11YOL005C MDL1P33310 695 aa2.11□□□□□ -2.07
RPB11YOL005C DOA1P36037 715 aa2.11□□□□□ -2.07
RPB11YOL005C ECM8P38246 354 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms