RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W IGO1P53897 168 aa2.1□□□□□ -2.07
DDR48YMR173W SKI8Q02793 397 aaPredicted RBP2.1□□□□□ -2.07
DDR48YMR173W ARX1Q03862 593 aaKnown RBP2.1□□□□□ -2.07
DDR48YMR173W DON1Q05610 365 aa2.1□□□□□ -2.07
DDR48YMR173W SFI1Q12369 946 aa2.1□□□□□ -2.07
DDR48YMR173W IMA3P0CW40 589 aa2.09□□□□□ -2.07
DDR48YMR173W IMA4P0CW41 589 aa2.09□□□□□ -2.07
DDR48YMR173W RED1P14291 827 aa2.09□□□□□ -2.07
DDR48YMR173W EXG1P23776 448 aaKnown RBP2.09□□□□□ -2.07
DDR48YMR173W TFB1P32776 642 aa2.09□□□□□ -2.07
DDR48YMR173W NFU1P32860 256 aa2.09□□□□□ -2.07
DDR48YMR173W HAC1P41546 238 aa2.09□□□□□ -2.07
DDR48YMR173W KAP120Q02932 1032 aa2.09□□□□□ -2.07
DDR48YMR173W RPN9Q04062 393 aaKnown RBP2.09□□□□□ -2.07
DDR48YMR173W PRM6Q04705 352 aa2.09□□□□□ -2.07
DDR48YMR173W YPR091CQ06833 770 aa2.09□□□□□ -2.07
DDR48YMR173W MFG1Q07684 458 aa2.09□□□□□ -2.07
DDR48YMR173W IMA2Q08295 589 aa2.09□□□□□ -2.07
DDR48YMR173W RUP1Q12242 671 aa2.09□□□□□ -2.07
DDR48YMR173W EAF3Q12432 401 aa2.09□□□□□ -2.07
DDR48YMR173W RAX2Q12465 1220 aa2.09□□□□□ -2.07
DDR48YMR173W ISN1Q99312 450 aa2.09□□□□□ -2.07
DDR48YMR173W CAP2P13517 287 aa2.08□□□□□ -2.08
DDR48YMR173W ZRC1P20107 442 aa2.08□□□□□ -2.08
DDR48YMR173W DEP1P31385 405 aa2.08□□□□□ -2.08
DDR48YMR173W MRPL27P36526 146 aaPredicted RBP2.08□□□□□ -2.08
DDR48YMR173W ATP3P38077 311 aaKnown RBP2.08□□□□□ -2.08
DDR48YMR173W YBR056WP38081 501 aa2.08□□□□□ -2.08
DDR48YMR173W LCB3P47013 409 aa2.08□□□□□ -2.08
DDR48YMR173W STD1Q02794 444 aa2.08□□□□□ -2.08
DDR48YMR173W MMT1Q03218 510 aa2.08□□□□□ -2.08
DDR48YMR173W TDA1Q03533 586 aa2.08□□□□□ -2.08
DDR48YMR173W YDL114WQ07530 308 aa2.08□□□□□ -2.08
DDR48YMR173W MED2Q12124 431 aa2.08□□□□□ -2.08
DDR48YMR173W NAG1Q8TGN9 163 aa2.08□□□□□ -2.08
DDR48YMR173W COX3P00420 269 aa2.07□□□□□ -2.08
DDR48YMR173W PIS1P06197 220 aaKnown RBP2.07□□□□□ -2.08
DDR48YMR173W HOM3P10869 527 aa2.07□□□□□ -2.08
DDR48YMR173W SRV2P17555 526 aaKnown RBP2.07□□□□□ -2.08
DDR48YMR173W ECT1P33412 323 aa2.07□□□□□ -2.08
DDR48YMR173W MMS4P38257 691 aa2.07□□□□□ -2.08
DDR48YMR173W NOC2P39744 710 aaKnown RBP2.07□□□□□ -2.08
DDR48YMR173W TOS3P43637 560 aa2.07□□□□□ -2.08
DDR48YMR173W YGR250CP53316 781 aaKnown RBP2.07□□□□□ -2.08
DDR48YMR173W RPT4P53549 437 aaKnown RBP2.07□□□□□ -2.08
DDR48YMR173W ALF1P53904 254 aa2.07□□□□□ -2.08
DDR48YMR173W TSR2Q06672 205 aaKnown RBP2.07□□□□□ -2.08
DDR48YMR173W DIS3Q08162 1001 aaKnown RBP2.07□□□□□ -2.08
DDR48YMR173W NCA2Q12374 616 aa2.07□□□□□ -2.08
DDR48YMR173W PAB1P04147 577 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
DDR48YMR173W GAT2P40209 560 aa2.06□□□□□ -2.08
DDR48YMR173W YGL262WP53054 175 aa2.06□□□□□ -2.08
DDR48YMR173W VHT1P53241 593 aa2.06□□□□□ -2.08
DDR48YMR173W SUB1P54000 292 aaKnown RBP2.06□□□□□ -2.08
DDR48YMR173W KTR6P54070 446 aa2.06□□□□□ -2.08
DDR48YMR173W ACL4Q03771 387 aa2.06□□□□□ -2.08
DDR48YMR173W YMR130WQ04223 302 aa2.06□□□□□ -2.08
DDR48YMR173W DCS1Q06151 350 aa2.06□□□□□ -2.08
DDR48YMR173W SCM3Q12334 223 aa2.06□□□□□ -2.08
DDR48YMR173W FOL3Q12676 427 aaPredicted RBP2.06□□□□□ -2.08
DDR48YMR173W TPI1P00942 248 aaKnown RBP2.05□□□□□ -2.08
DDR48YMR173W URA4P20051 364 aa2.05□□□□□ -2.08
DDR48YMR173W REC107P21651 314 aa2.05□□□□□ -2.08
DDR48YMR173W YCR051WP25631 222 aa2.05□□□□□ -2.08
DDR48YMR173W BRF1P29056 596 aa2.05□□□□□ -2.08
DDR48YMR173W FUN26P31381 517 aa2.05□□□□□ -2.08
DDR48YMR173W ZUO1P32527 433 aaKnown RBP2.05□□□□□ -2.08
DDR48YMR173W YEF1P32622 495 aa2.05□□□□□ -2.08
DDR48YMR173W SWE1P32944 819 aa2.05□□□□□ -2.08
DDR48YMR173W ATP22P50273 684 aaPredicted RBP2.05□□□□□ -2.08
DDR48YMR173W YIP5P53108 310 aa2.05□□□□□ -2.08
DDR48YMR173W PRP42Q03776 544 aaKnown RBP2.05□□□□□ -2.08
DDR48YMR173W YPS3Q12303 508 aa2.05□□□□□ -2.08
DDR48YMR173W PRM7Q12459 698 aa2.05□□□□□ -2.08
DDR48YMR173W TY1B-AO13527 1196 aaKnown RBP2.04□□□□□ -2.08
DDR48YMR173W COX13P32799 129 aa2.04□□□□□ -2.08
DDR48YMR173W CYM1P32898 989 aa2.04□□□□□ -2.08
DDR48YMR173W PFF1P38244 976 aa2.04□□□□□ -2.08
DDR48YMR173W CHL4P38907 458 aa2.04□□□□□ -2.08
DDR48YMR173W LSM5P40089 93 aaKnown RBP2.04□□□□□ -2.08
DDR48YMR173W YNL208WP40159 199 aaKnown RBP2.04□□□□□ -2.08
DDR48YMR173W NDE1P40215 560 aa2.04□□□□□ -2.08
DDR48YMR173W YFL012WP43580 148 aa2.04□□□□□ -2.08
DDR48YMR173W IGD1P43598 195 aa2.04□□□□□ -2.08
DDR48YMR173W AIP1P46680 615 aaKnown RBP2.04□□□□□ -2.08
DDR48YMR173W MTR10Q99189 972 aa2.04□□□□□ -2.08
DDR48YMR173W POM152P39685 1337 aa2.03□□□□□ -2.08
DDR48YMR173W CDC31P06704 161 aaKnown RBP2.03□□□□□ -2.08
DDR48YMR173W STE7P06784 515 aa2.03□□□□□ -2.08
DDR48YMR173W RAD5P32849 1169 aaPredicted RBP2.03□□□□□ -2.08
DDR48YMR173W OLA1P38219 394 aaKnown RBP2.03□□□□□ -2.08
DDR48YMR173W NAB3P38996 802 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
DDR48YMR173W SEC9P40357 651 aa2.03□□□□□ -2.08
DDR48YMR173W PFS2P42841 465 aaKnown RBP2.03□□□□□ -2.08
DDR48YMR173W ROY1Q04847 553 aa2.03□□□□□ -2.08
DDR48YMR173W MMR1Q06324 491 aa2.03□□□□□ -2.08
DDR48YMR173W YCR024C-BQ3E7Z8 88 aa2.03□□□□□ -2.08
DDR48YMR173W YRF1-4O13559 1382 aa2.02□□□□□ -2.09
DDR48YMR173W RPN12P32496 274 aa2.02□□□□□ -2.09
DDR48YMR173W LSM12P38828 187 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms