RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W ROG1P53118 685 aa3.89□□□□□ -1.79
SPO20YMR017W FDH1Q08911 376 aa3.89□□□□□ -1.79
SPO20YMR017W NCA2Q12374 616 aa3.89□□□□□ -1.79
SPO20YMR017W PHO91P27514 894 aa3.88□□□□□ -1.79
SPO20YMR017W SBE22P38814 852 aa3.88□□□□□ -1.79
SPO20YMR017W COX14P39103 70 aa3.88□□□□□ -1.79
SPO20YMR017W MMF1P40185 145 aaKnown RBP3.88□□□□□ -1.79
SPO20YMR017W YIL029CP40538 142 aa3.88□□□□□ -1.79
SPO20YMR017W TOS3P43637 560 aa3.88□□□□□ -1.79
SPO20YMR017W NUP116Q02630 1113 aa3.88□□□□□ -1.79
SPO20YMR017W RPL1AP0CX43 217 aaKnown RBP3.87□□□□□ -1.79
SPO20YMR017W RPL1BP0CX44 217 aaKnown RBP3.87□□□□□ -1.79
SPO20YMR017W NAM2P11325 894 aa3.87□□□□□ -1.79
SPO20YMR017W NRP1P32770 719 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
SPO20YMR017W MDL1P33310 695 aa3.87□□□□□ -1.79
SPO20YMR017W SKN1P33336 771 aa3.87□□□□□ -1.79
SPO20YMR017W GDI1P39958 451 aaKnown RBP3.87□□□□□ -1.79
SPO20YMR017W MDE1P47095 244 aa3.87□□□□□ -1.79
SPO20YMR017W PEX25Q02969 394 aa3.87□□□□□ -1.79
SPO20YMR017W PAL1Q05518 499 aaKnown RBP3.87□□□□□ -1.79
SPO20YMR017W NDE2Q07500 545 aa3.87□□□□□ -1.79
SPO20YMR017W NSE1Q07913 336 aa3.87□□□□□ -1.79
SPO20YMR017W CEX1Q12453 761 aa3.87□□□□□ -1.79
SPO20YMR017W CAP2P13517 287 aa3.86□□□□□ -1.79
SPO20YMR017W EXG1P23776 448 aaKnown RBP3.86□□□□□ -1.79
SPO20YMR017W RVS161P25343 265 aaKnown RBP3.86□□□□□ -1.79
SPO20YMR017W LDB16P25587 256 aa3.86□□□□□ -1.79
SPO20YMR017W PHA2P32452 334 aa3.86□□□□□ -1.79
SPO20YMR017W QDR3P38227 689 aa3.86□□□□□ -1.79
SPO20YMR017W PRE5P40302 234 aaKnown RBP3.86□□□□□ -1.79
SPO20YMR017W SDT1P53078 280 aa3.86□□□□□ -1.79
SPO20YMR017W MEH1Q02205 184 aa3.86□□□□□ -1.79
SPO20YMR017W NDL1Q06568 189 aa3.86□□□□□ -1.79
SPO20YMR017W MDM36Q06820 579 aa3.86□□□□□ -1.79
SPO20YMR017W IRC25Q07951 179 aa3.86□□□□□ -1.79
SPO20YMR017W RBD2Q12270 262 aa3.86□□□□□ -1.79
SPO20YMR017W ATP1P07251 545 aaKnown RBP3.85□□□□□ -1.79
SPO20YMR017W JEM1P40358 645 aa3.85□□□□□ -1.79
SPO20YMR017W SHE10P53075 577 aa3.85□□□□□ -1.79
SPO20YMR017W MRM2P53123 320 aa3.85□□□□□ -1.79
SPO20YMR017W MTQ1P53944 314 aa3.85□□□□□ -1.79
SPO20YMR017W YDR541CQ03049 344 aa3.85□□□□□ -1.79
SPO20YMR017W RNH203Q12338 110 aa3.85□□□□□ -1.79
SPO20YMR017W SLM5P25345 492 aaKnown RBP3.84□□□□□ -1.79
SPO20YMR017W RRP7P25368 297 aaPredicted RBP3.84□□□□□ -1.79
SPO20YMR017W YSC83P32792 385 aa3.84□□□□□ -1.79
SPO20YMR017W COX13P32799 129 aa3.84□□□□□ -1.79
SPO20YMR017W CSE2P33308 149 aa3.84□□□□□ -1.79
SPO20YMR017W PFF1P38244 976 aa3.84□□□□□ -1.79
SPO20YMR017W SEC28P40509 296 aaKnown RBP3.84□□□□□ -1.79
SPO20YMR017W YJR085CP47131 105 aaKnown RBP3.84□□□□□ -1.79
SPO20YMR017W RRP46P53256 223 aaPredicted RBP3.84□□□□□ -1.79
SPO20YMR017W POM152P39685 1337 aa3.84□□□□□ -1.79
SPO20YMR017W OPI3P05375 206 aa3.83□□□□□ -1.8
SPO20YMR017W DPH5P32469 300 aaPredicted RBP3.83□□□□□ -1.8
SPO20YMR017W MLH1P38920 769 aa3.83□□□□□ -1.8
SPO20YMR017W PAC11P40960 533 aa3.83□□□□□ -1.8
SPO20YMR017W ECM7Q06200 448 aa3.83□□□□□ -1.8
SPO20YMR017W CUE5Q08412 411 aaKnown RBP3.83□□□□□ -1.8
SPO20YMR017W TMC1Q08422 150 aaPredicted RBP3.83□□□□□ -1.8
SPO20YMR017W AHC1Q12433 566 aa3.83□□□□□ -1.8
SPO20YMR017W YEF1P32622 495 aa3.82□□□□□ -1.8
SPO20YMR017W MRPL4P36517 319 aa3.82□□□□□ -1.8
SPO20YMR017W MRPL10P36520 322 aa3.82□□□□□ -1.8
SPO20YMR017W YHR131CP38835 850 aa3.82□□□□□ -1.8
SPO20YMR017W MNL1P38888 796 aa3.82□□□□□ -1.8
SPO20YMR017W LCB3P47013 409 aa3.82□□□□□ -1.8
SPO20YMR017W STE24P47154 453 aa3.82□□□□□ -1.8
SPO20YMR017W TOS2P50078 622 aa3.82□□□□□ -1.8
SPO20YMR017W PMT5P52867 743 aa3.82□□□□□ -1.8
SPO20YMR017W YGR117CP53270 476 aa3.82□□□□□ -1.8
SPO20YMR017W COS1P53822 381 aa3.82□□□□□ -1.8
SPO20YMR017W SPR6Q01684 191 aa3.82□□□□□ -1.8
SPO20YMR017W ERO1Q03103 563 aa3.82□□□□□ -1.8
SPO20YMR017W PRP3Q03338 469 aaPredicted RBP3.82□□□□□ -1.8
SPO20YMR017W MHR1Q06630 226 aa3.82□□□□□ -1.8
SPO20YMR017W YGK3Q12222 375 aaPredicted RBP3.82□□□□□ -1.8
SPO20YMR017W WTM1Q12363 437 aaKnown RBP3.82□□□□□ -1.8
SPO20YMR017W PAB1P04147 577 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
SPO20YMR017W SSC1P0CS90 654 aaKnown RBP3.81□□□□□ -1.8
SPO20YMR017W RPL12AP0CX53 165 aaKnown RBP3.81□□□□□ -1.8
SPO20YMR017W RPL12BP0CX54 165 aa3.81□□□□□ -1.8
SPO20YMR017W MSI1P13712 422 aa3.81□□□□□ -1.8
SPO20YMR017W SKT5P34226 696 aa3.81□□□□□ -1.8
SPO20YMR017W ATM1P40416 690 aa3.81□□□□□ -1.8
SPO20YMR017W URC2Q04411 772 aa3.81□□□□□ -1.8
SPO20YMR017W RIF2Q06208 395 aa3.81□□□□□ -1.8
SPO20YMR017W EAF3Q12432 401 aa3.81□□□□□ -1.8
SPO20YMR017W IZH2Q12442 317 aa3.81□□□□□ -1.8
SPO20YMR017W TPK3P05986 398 aa3.8□□□□□ -1.8
SPO20YMR017W PUP2P32379 260 aa3.8□□□□□ -1.8
SPO20YMR017W SPR1P32603 445 aa3.8□□□□□ -1.8
SPO20YMR017W ADA2Q02336 434 aa3.8□□□□□ -1.8
SPO20YMR017W RCF1Q03713 159 aa3.8□□□□□ -1.8
SPO20YMR017W RTN1Q04947 295 aaKnown RBP3.8□□□□□ -1.8
SPO20YMR017W HSP82P02829 709 aaKnown RBP3.79□□□□□ -1.8
SPO20YMR017W ARF1P11076 181 aaKnown RBP3.79□□□□□ -1.8
SPO20YMR017W DOA1P36037 715 aa3.79□□□□□ -1.8
SPO20YMR017W RXT2P38255 430 aa3.79□□□□□ -1.8
SPO20YMR017W YHK8P38776 514 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms