RNA–Protein interactions for RNA: YKL146W

AVT3, Transcript of Vacuolar transporter, yeast

Gene AVT3, Length 2,079 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT3	YKL146W	YOR342C	Q12182	319 aa		4.88	□□□□□ -1.63
AVT3	YKL146W	NSI1	Q12457	570 aa		4.88	□□□□□ -1.63
AVT3	YKL146W	ATR1	P13090	542 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	FBA1	P14540	359 aa	Known RBP	4.87	□□□□□ -1.63
AVT3	YKL146W	CBS2	P14905	389 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	RNQ1	P25367	405 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	STP2	P38704	541 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	DLD3	P39976	496 aa	Known RBP	4.87	□□□□□ -1.63
AVT3	YKL146W	LTP1	P40347	161 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	PSA1	P41940	361 aa	Known RBP	4.87	□□□□□ -1.63
AVT3	YKL146W	ATP22	P50273	684 aa	Predicted RBP	4.87	□□□□□ -1.63
AVT3	YKL146W	FHN1	P53279	174 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	SNP1	Q00916	300 aa	Predicted RBP	4.87	□□□□□ -1.63
AVT3	YKL146W	YDR239C	Q03780	787 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	SPC19	Q03954	165 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	APC4	Q04601	652 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	TEN1	Q07921	160 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	RTK1	Q12100	620 aa	Predicted RBP	4.87	□□□□□ -1.63
AVT3	YKL146W	WTM1	Q12363	437 aa	Known RBP	4.87	□□□□□ -1.63
AVT3	YKL146W	YDL199C	Q12407	687 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	YOL159C-A	Q3E769	90 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	TIM9	O74700	87 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	FLP1	P03870	423 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	GRR1	P24814	1151 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	MGR1	P25573	417 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	YCL049C	P25577	312 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	PRO1	P32264	428 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	RTG1	P32607	177 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	OMA1	P36163	345 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	SCO2	P38072	301 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	TSL1	P38427	1098 aa	Known RBP	4.87	□□□□□ -1.63
AVT3	YKL146W	THO1	P40040	218 aa	Known RBP	4.87	□□□□□ -1.63
AVT3	YKL146W	PDS1	P40316	373 aa	Predicted RBP	4.87	□□□□□ -1.63
AVT3	YKL146W	PAC10	P48363	199 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	OAZ1	Q02803	292 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	RCF1	Q03713	159 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	RRP45	Q05636	305 aa	Known RBP	4.87	□□□□□ -1.63
AVT3	YKL146W	BNA5	Q05979	453 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	DBP9	Q06218	594 aa	Known RBP	4.87	□□□□□ -1.63
AVT3	YKL146W	RSA1	Q08932	381 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	VIK1	Q12045	647 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	LEU9	Q12166	604 aa	Known RBP	4.87	□□□□□ -1.63
AVT3	YKL146W	BMT6	Q12291	365 aa		4.87	□□□□□ -1.63
AVT3	YKL146W	MER1	P16523	270 aa		4.86	□□□□□ -1.63
AVT3	YKL146W	SNF5	P18480	905 aa		4.86	□□□□□ -1.63
AVT3	YKL146W	UBC8	P28263	218 aa		4.86	□□□□□ -1.63
AVT3	YKL146W	APE2	P32454	952 aa	Known RBP	4.86	□□□□□ -1.63
AVT3	YKL146W	HOG1	P32485	435 aa		4.86	□□□□□ -1.63
AVT3	YKL146W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
AVT3	YKL146W	OAR1	P35731	278 aa		4.86	□□□□□ -1.63
AVT3	YKL146W	RIB1	P38066	345 aa		4.86	□□□□□ -1.63
AVT3	YKL146W	MNL1	P38888	796 aa		4.86	□□□□□ -1.63
AVT3	YKL146W	AIM2	P39721	246 aa		4.86	□□□□□ -1.63
AVT3	YKL146W	PTC2	P39966	464 aa	Known RBP	4.86	□□□□□ -1.63
AVT3	YKL146W	YEL020C	P39994	560 aa		4.86	□□□□□ -1.63
AVT3	YKL146W	LYS12	P40495	371 aa	Known RBP	4.86	□□□□□ -1.63
AVT3	YKL146W	FET5	P43561	622 aa		4.86	□□□□□ -1.63
AVT3	YKL146W	BNA3	P47039	444 aa	Known RBP	4.86	□□□□□ -1.63
AVT3	YKL146W	ARI1	P53111	347 aa	Known RBP	4.86	□□□□□ -1.63
AVT3	YKL146W	DTD1	Q07648	150 aa	Known RBP	4.86	□□□□□ -1.63
AVT3	YKL146W	LOT6	Q07923	191 aa		4.86	□□□□□ -1.63
AVT3	YKL146W	IRC13	Q08630	104 aa		4.86	□□□□□ -1.63
AVT3	YKL146W	PUS7	Q08647	676 aa	Known RBP	4.86	□□□□□ -1.63
AVT3	YKL146W	PNO1	Q99216	274 aa	Known RBP	4.86	□□□□□ -1.63
AVT3	YKL146W	GPH1	P06738	902 aa	Known RBP	4.85	□□□□□ -1.63
AVT3	YKL146W	COR1	P07256	457 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	HOP1	P20050	605 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	POL4	P25615	582 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	YJU2	P28320	278 aa	Predicted RBP	4.85	□□□□□ -1.63
AVT3	YKL146W	NTH1	P32356	751 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	SRB5	P32585	307 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	SUI1	P32911	108 aa	Known RBP	4.85	□□□□□ -1.63
AVT3	YKL146W	ATG14	P38270	344 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	YHR177W	P38867	453 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	RPL10	P41805	221 aa	Known RBP	4.85	□□□□□ -1.63
AVT3	YKL146W	NIT2	P47016	307 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	DCP2	P53550	970 aa	Known RBP	4.85	□□□□□ -1.63
AVT3	YKL146W	RRN5	Q02983	363 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	SPO77	Q06134	477 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	RRT8	Q08219	342 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	YPL191C	Q08930	360 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	MMT2	Q08970	484 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	RKM5	Q12367	367 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	TOR2	P32600	2474 aa	Known RBP	4.85	□□□□□ -1.63
AVT3	YKL146W	HTS1	P07263	546 aa	Known RBP	4.85	□□□□□ -1.63
AVT3	YKL146W	DBP3	P20447	523 aa	Known RBP	4.85	□□□□□ -1.63
AVT3	YKL146W	MSB1	P21339	1137 aa	Known RBP	4.85	□□□□□ -1.63
AVT3	YKL146W	CWP1	P28319	239 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	ZTA1	P38230	334 aa	Known RBP	4.85	□□□□□ -1.63
AVT3	YKL146W	FAU1	P40099	211 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	NTA1	P40354	457 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	DUG1	P43616	481 aa	Known RBP	4.85	□□□□□ -1.63
AVT3	YKL146W	MEP3	P53390	489 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	YNL181W	P53878	407 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	IGO1	P53897	168 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	RRN11	Q04712	507 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	RQC1	Q05468	723 aa	Known RBP	4.85	□□□□□ -1.63
AVT3	YKL146W	MRL1	Q06815	381 aa		4.85	□□□□□ -1.63
AVT3	YKL146W	MF(ALPHA)1	P01149	165 aa		4.84	□□□□□ -1.63
AVT3	YKL146W	PUT2	P07275	575 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms