RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C RAX1Q08760 435 aa3.01□□□□□ -1.93
CTK2YJL006C GPM3Q12326 303 aa3.01□□□□□ -1.93
CTK2YJL006C ERP4Q12450 207 aa3.01□□□□□ -1.93
CTK2YJL006C YCL068CP25593 260 aa3□□□□□ -1.93
CTK2YJL006C LTV1P34078 463 aa3□□□□□ -1.93
CTK2YJL006C ATP3P38077 311 aaKnown RBP3□□□□□ -1.93
CTK2YJL006C CHK1P38147 527 aa3□□□□□ -1.93
CTK2YJL006C STN1P38960 494 aa3□□□□□ -1.93
CTK2YJL006C MDE1P47095 244 aa3□□□□□ -1.93
CTK2YJL006C PIB2P53191 635 aa3□□□□□ -1.93
CTK2YJL006C CCE1Q03702 353 aa3□□□□□ -1.93
CTK2YJL006C YDR341CQ05506 607 aaKnown RBP3□□□□□ -1.93
CTK2YJL006C NDE2Q07500 545 aa3□□□□□ -1.93
CTK2YJL006C SNU66Q12420 587 aaPredicted RBP3□□□□□ -1.93
CTK2YJL006C HSP104P31539 908 aaKnown RBP2.99□□□□□ -1.93
CTK2YJL006C BRO1P48582 844 aa2.99□□□□□ -1.93
CTK2YJL006C MTQ1P53944 314 aa2.99□□□□□ -1.93
CTK2YJL006C VPS9P54787 451 aa2.99□□□□□ -1.93
CTK2YJL006C NUP116Q02630 1113 aa2.99□□□□□ -1.93
CTK2YJL006C IRC25Q07951 179 aa2.99□□□□□ -1.93
CTK2YJL006C WTM1Q12363 437 aaKnown RBP2.99□□□□□ -1.93
CTK2YJL006C ALG1P16661 449 aa2.98□□□□□ -1.93
CTK2YJL006C PHA2P32452 334 aa2.98□□□□□ -1.93
CTK2YJL006C CSE2P33308 149 aa2.98□□□□□ -1.93
CTK2YJL006C SBE22P38814 852 aa2.98□□□□□ -1.93
CTK2YJL006C FAD1P38913 306 aa2.98□□□□□ -1.93
CTK2YJL006C YER079WP40052 210 aaKnown RBP2.98□□□□□ -1.93
CTK2YJL006C YIL029CP40538 142 aa2.98□□□□□ -1.93
CTK2YJL006C TOS3P43637 560 aa2.98□□□□□ -1.93
CTK2YJL006C HAL1Q01766 294 aa2.98□□□□□ -1.93
CTK2YJL006C SPE3Q12074 293 aaKnown RBP2.98□□□□□ -1.93
CTK2YJL006C NCA2Q12374 616 aa2.98□□□□□ -1.93
CTK2YJL006C DST1P07273 309 aa2.97□□□□□ -1.93
CTK2YJL006C EXG1P23776 448 aaKnown RBP2.97□□□□□ -1.93
CTK2YJL006C PCL1P24867 279 aa2.97□□□□□ -1.93
CTK2YJL006C LRP1P38801 184 aaKnown RBP2.97□□□□□ -1.93
CTK2YJL006C COX14P39103 70 aa2.97□□□□□ -1.93
CTK2YJL006C CHS6P40955 746 aa2.97□□□□□ -1.93
CTK2YJL006C GYL1Q04322 720 aa2.97□□□□□ -1.93
CTK2YJL006C NSE1Q07913 336 aa2.97□□□□□ -1.93
CTK2YJL006C CEX1Q12453 761 aa2.97□□□□□ -1.93
CTK2YJL006C CDC21P06785 304 aa2.96□□□□□ -1.94
CTK2YJL006C RPL1AP0CX43 217 aaKnown RBP2.96□□□□□ -1.94
CTK2YJL006C RPL1BP0CX44 217 aaKnown RBP2.96□□□□□ -1.94
CTK2YJL006C CAP2P13517 287 aa2.96□□□□□ -1.94
CTK2YJL006C SKN1P33336 771 aa2.96□□□□□ -1.94
CTK2YJL006C MRPL10P36520 322 aa2.96□□□□□ -1.94
CTK2YJL006C STP2P38704 541 aa2.96□□□□□ -1.94
CTK2YJL006C INM1P38710 295 aa2.96□□□□□ -1.94
CTK2YJL006C GPI16P38875 610 aa2.96□□□□□ -1.94
CTK2YJL006C YJR085CP47131 105 aaKnown RBP2.96□□□□□ -1.94
CTK2YJL006C MRM2P53123 320 aa2.96□□□□□ -1.94
CTK2YJL006C RSC1P53236 928 aa2.96□□□□□ -1.94
CTK2YJL006C TSA2Q04120 196 aa2.96□□□□□ -1.94
CTK2YJL006C MDM36Q06820 579 aa2.96□□□□□ -1.94
CTK2YJL006C PLP2Q12017 286 aa2.96□□□□□ -1.94
CTK2YJL006C ATP1P07251 545 aaKnown RBP2.95□□□□□ -1.94
CTK2YJL006C NAM2P11325 894 aa2.95□□□□□ -1.94
CTK2YJL006C YKL097CP34245 136 aa2.95□□□□□ -1.94
CTK2YJL006C MRP21P38175 177 aa2.95□□□□□ -1.94
CTK2YJL006C ADA2Q02336 434 aa2.95□□□□□ -1.94
CTK2YJL006C YGK3Q12222 375 aaPredicted RBP2.95□□□□□ -1.94
CTK2YJL006C RPN5Q12250 445 aaKnown RBP2.95□□□□□ -1.94
CTK2YJL006C IZH2Q12442 317 aa2.95□□□□□ -1.94
CTK2YJL006C PDE2P06776 526 aa2.94□□□□□ -1.94
CTK2YJL006C MNE1P24720 663 aa2.94□□□□□ -1.94
CTK2YJL006C PEX5P35056 612 aa2.94□□□□□ -1.94
CTK2YJL006C YHR131CP38835 850 aa2.94□□□□□ -1.94
CTK2YJL006C MMF1P40185 145 aaKnown RBP2.94□□□□□ -1.94
CTK2YJL006C STE24P47154 453 aa2.94□□□□□ -1.94
CTK2YJL006C COS1P53822 381 aa2.94□□□□□ -1.94
CTK2YJL006C SXM1Q04175 944 aaKnown RBP2.94□□□□□ -1.94
CTK2YJL006C NDL1Q06568 189 aa2.94□□□□□ -1.94
CTK2YJL006C MSI1P13712 422 aa2.93□□□□□ -1.94
CTK2YJL006C RPB5P20434 215 aa2.93□□□□□ -1.94
CTK2YJL006C PHO91P27514 894 aa2.93□□□□□ -1.94
CTK2YJL006C DPH5P32469 300 aaPredicted RBP2.93□□□□□ -1.94
CTK2YJL006C NRP1P32770 719 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
CTK2YJL006C QDR3P38227 689 aa2.93□□□□□ -1.94
CTK2YJL006C AIM10P39965 576 aaKnown RBP2.93□□□□□ -1.94
CTK2YJL006C EFM4P40516 257 aa2.93□□□□□ -1.94
CTK2YJL006C LCB2P40970 561 aa2.93□□□□□ -1.94
CTK2YJL006C AIM24P47127 394 aa2.93□□□□□ -1.94
CTK2YJL006C YGR117CP53270 476 aa2.93□□□□□ -1.94
CTK2YJL006C SPR6Q01684 191 aa2.93□□□□□ -1.94
CTK2YJL006C YMR102CQ03177 834 aa2.93□□□□□ -1.94
CTK2YJL006C PRP3Q03338 469 aaPredicted RBP2.93□□□□□ -1.94
CTK2YJL006C SMC5Q08204 1093 aa2.93□□□□□ -1.94
CTK2YJL006C RNH203Q12338 110 aa2.93□□□□□ -1.94
CTK2YJL006C JID1Q12350 301 aa2.93□□□□□ -1.94
CTK2YJL006C AHC1Q12433 566 aa2.93□□□□□ -1.94
CTK2YJL006C PAR32Q12515 295 aaKnown RBP2.93□□□□□ -1.94
CTK2YJL006C POM152P39685 1337 aa2.93□□□□□ -1.94
CTK2YJL006C NUP2P32499 720 aa2.92□□□□□ -1.94
CTK2YJL006C YEF1P32622 495 aa2.92□□□□□ -1.94
CTK2YJL006C COX13P32799 129 aa2.92□□□□□ -1.94
CTK2YJL006C GDI1P39958 451 aaKnown RBP2.92□□□□□ -1.94
CTK2YJL006C UTP18P40362 594 aaPredicted RBP2.92□□□□□ -1.94
CTK2YJL006C MAM33P40513 266 aa2.92□□□□□ -1.94
CTK2YJL006C HAC1P41546 238 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms